RNA–Protein interactions for RNA: ENST00000622138.4

TRIM49B-202, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-202ENST00000622138 NXPH1P58417 271 aa6.33□□□□□ -1.4
TRIM49B-202ENST00000622138 CCDC144NLQ6NUI1 221 aa6.33□□□□□ -1.4
TRIM49B-202ENST00000622138 SHISA2Q6UWI4 295 aa6.33□□□□□ -1.4
TRIM49B-202ENST00000622138 SYT13Q7L8C5 426 aa6.33□□□□□ -1.4
TRIM49B-202ENST00000622138 C1QL2Q7Z5L3 287 aa6.33□□□□□ -1.4
TRIM49B-202ENST00000622138 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.33□□□□□ -1.4
TRIM49B-202ENST00000622138 ANKRD37Q7Z713 158 aa6.33□□□□□ -1.4
TRIM49B-202ENST00000622138 TSKUQ8WUA8 353 aa6.33□□□□□ -1.4
TRIM49B-202ENST00000622138 ZNF501Q96CX3 271 aaPredicted RBP6.33□□□□□ -1.4
TRIM49B-202ENST00000622138 PMCHL2Q9BQD1 86 aa6.33□□□□□ -1.4
TRIM49B-202ENST00000622138 LINC00470Q9BZP3 86 aa6.33□□□□□ -1.4
TRIM49B-202ENST00000622138 GEMIN7Q9H840 131 aaKnown RBP6.33□□□□□ -1.4
TRIM49B-202ENST00000622138 GP6Q9HCN6 339 aa6.33□□□□□ -1.4
TRIM49B-202ENST00000622138 THYN1Q9P016 225 aa6.33□□□□□ -1.4
TRIM49B-202ENST00000622138 JKAMPQ9P055 326 aa6.33□□□□□ -1.4
TRIM49B-202ENST00000622138 UBE2J1Q9Y385 318 aaPredicted RBP6.33□□□□□ -1.4
TRIM49B-202ENST00000622138 RALGAPA1Q6GYQ0 2036 aa6.33□□□□□ -1.4
TRIM49B-202ENST00000622138 A0A1W2PR80 420 aa6.33□□□□□ -1.4
TRIM49B-202ENST00000622138 FAM231BA6NCW3 169 aa6.33□□□□□ -1.4
TRIM49B-202ENST00000622138 GAGE12HA6NDE8 117 aa6.33□□□□□ -1.4
TRIM49B-202ENST00000622138 RBMXL2O75526 392 aaKnown RBP6.33□□□□□ -1.4
TRIM49B-202ENST00000622138 SRFP11831 508 aa6.33□□□□□ -1.4
TRIM49B-202ENST00000622138 IER3P46695 156 aa6.33□□□□□ -1.4
TRIM49B-202ENST00000622138 CLRN1P58418 232 aa6.33□□□□□ -1.4
TRIM49B-202ENST00000622138 RPEL1Q2QD12 228 aa6.33□□□□□ -1.4
TRIM49B-202ENST00000622138 DCAF12Q5T6F0 453 aa6.33□□□□□ -1.4
TRIM49B-202ENST00000622138 FAM69BQ5VUD6 431 aa6.33□□□□□ -1.4
TRIM49B-202ENST00000622138 WDR74Q6RFH5 385 aaPredicted RBP6.33□□□□□ -1.4
TRIM49B-202ENST00000622138 RPP25LQ8N5L8 163 aaKnown RBP6.33□□□□□ -1.4
TRIM49B-202ENST00000622138 TAF15Q92804 592 aaKnown RBP eCLIP6.33□□□□□ -1.4
TRIM49B-202ENST00000622138 C10orf35Q96D05 121 aa6.33□□□□□ -1.4
TRIM49B-202ENST00000622138 LYZL4Q96KX0 146 aa6.33□□□□□ -1.4
TRIM49B-202ENST00000622138 RCHY1Q96PM5 261 aa6.33□□□□□ -1.4
TRIM49B-202ENST00000622138 NCOA6Q14686 2063 aaPredicted RBP6.33□□□□□ -1.4
TRIM49B-202ENST00000622138 ASCC3Q8N3C0 2202 aaKnown RBP6.32□□□□□ -1.4
TRIM49B-202ENST00000622138 FAM181BA6NEQ2 426 aa6.32□□□□□ -1.4
TRIM49B-202ENST00000622138 F2RL2O00254 374 aa6.32□□□□□ -1.4
TRIM49B-202ENST00000622138 LAMTOR5O43504 91 aa6.32□□□□□ -1.4
TRIM49B-202ENST00000622138 PAGE4O60829 102 aa6.32□□□□□ -1.4
TRIM49B-202ENST00000622138 HLA-DQA1P01909 254 aa6.32□□□□□ -1.4
TRIM49B-202ENST00000622138 CCL1P22362 96 aa6.32□□□□□ -1.4
TRIM49B-202ENST00000622138 NPY1RP25929 384 aa6.32□□□□□ -1.4
TRIM49B-202ENST00000622138 SUMO3P55854 103 aaPredicted RBP6.32□□□□□ -1.4
TRIM49B-202ENST00000622138 GNB1P62873 340 aa6.32□□□□□ -1.4
TRIM49B-202ENST00000622138 OR8B8Q15620 311 aa6.32□□□□□ -1.4
TRIM49B-202ENST00000622138 LTC4SQ16873 150 aa6.32□□□□□ -1.4
TRIM49B-202ENST00000622138 TMEM249Q2WGJ8 235 aa6.32□□□□□ -1.4
TRIM49B-202ENST00000622138 SLC25A47Q6Q0C1 308 aa6.32□□□□□ -1.4
TRIM49B-202ENST00000622138 FOXI2Q6ZQN5 318 aa6.32□□□□□ -1.4
TRIM49B-202ENST00000622138 FA2HQ7L5A8 372 aa6.32□□□□□ -1.4
TRIM49B-202ENST00000622138 RNF138Q8WVD3 245 aa6.32□□□□□ -1.4
TRIM49B-202ENST00000622138 SLC25A22Q9H936 323 aa6.32□□□□□ -1.4
TRIM49B-202ENST00000622138 HES4Q9HCC6 221 aa6.32□□□□□ -1.4
TRIM49B-202ENST00000622138 KCNIP1Q9NZI2 227 aa6.32□□□□□ -1.4
TRIM49B-202ENST00000622138 KLRF1Q9NZS2 232 aa6.32□□□□□ -1.4
TRIM49B-202ENST00000622138 MYO7BQ6PIF6 2116 aa6.32□□□□□ -1.4
TRIM49B-202ENST00000622138 A6NDN8 102 aa6.31□□□□□ -1.4
TRIM49B-202ENST00000622138 ANKRD30BLA7E2S9 258 aa6.31□□□□□ -1.4
TRIM49B-202ENST00000622138 ZNF207O43670 478 aaKnown RBP6.31□□□□□ -1.4
TRIM49B-202ENST00000622138 DUX1O43812 170 aa6.31□□□□□ -1.4
TRIM49B-202ENST00000622138 IGKV1D-33P01593 117 aa6.31□□□□□ -1.4
TRIM49B-202ENST00000622138 IGKV1-33P01594 117 aa6.31□□□□□ -1.4
TRIM49B-202ENST00000622138 NPPCP23582 126 aa6.31□□□□□ -1.4
TRIM49B-202ENST00000622138 CA7P43166 264 aa6.31□□□□□ -1.4
TRIM49B-202ENST00000622138 Q56UQ5 140 aa6.31□□□□□ -1.4
TRIM49B-202ENST00000622138 LCN12Q6JVE5 192 aa6.31□□□□□ -1.4
TRIM49B-202ENST00000622138 ZNF295-AS1Q8N0V1 137 aa6.31□□□□□ -1.4
TRIM49B-202ENST00000622138 OR2K2Q8NGT1 345 aa6.31□□□□□ -1.4
TRIM49B-202ENST00000622138 APOBEC3DQ96AK3 386 aaPredicted RBP6.31□□□□□ -1.4
TRIM49B-202ENST00000622138 Q96M66 194 aa6.31□□□□□ -1.4
TRIM49B-202ENST00000622138 MS4A6AQ9H2W1 248 aa6.31□□□□□ -1.4
TRIM49B-202ENST00000622138 NAT8BQ9UHF3 227 aa6.31□□□□□ -1.4
TRIM49B-202ENST00000622138 LY96Q9Y6Y9 160 aa6.31□□□□□ -1.4
TRIM49B-202ENST00000622138 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.31□□□□□ -1.4
TRIM49B-202ENST00000622138 OR4C46A6NHA9 309 aa6.31□□□□□ -1.4
TRIM49B-202ENST00000622138 IGHG1P01857 330 aa6.31□□□□□ -1.4
TRIM49B-202ENST00000622138 PPOXP50336 477 aa6.31□□□□□ -1.4
TRIM49B-202ENST00000622138 SSBP2P81877 361 aaPredicted RBP6.31□□□□□ -1.4
TRIM49B-202ENST00000622138 ARF1P84077 181 aaKnown RBP6.31□□□□□ -1.4
TRIM49B-202ENST00000622138 ODF1Q14990 250 aa6.31□□□□□ -1.4
TRIM49B-202ENST00000622138 DOK3Q7L591 496 aa6.31□□□□□ -1.4
TRIM49B-202ENST00000622138 C6orf201Q7Z4U5 140 aa6.31□□□□□ -1.4
TRIM49B-202ENST00000622138 PLXDC1Q8IUK5 500 aa6.31□□□□□ -1.4
TRIM49B-202ENST00000622138 SLC25A45Q8N413 288 aa6.31□□□□□ -1.4
TRIM49B-202ENST00000622138 ZNF439Q8NDP4 499 aa6.31□□□□□ -1.4
TRIM49B-202ENST00000622138 OR5D13Q8NGL4 314 aa6.31□□□□□ -1.4
TRIM49B-202ENST00000622138 JMJD8Q96S16 334 aa6.31□□□□□ -1.4
TRIM49B-202ENST00000622138 HDHD3Q9BSH5 251 aaPredicted RBP6.31□□□□□ -1.4
TRIM49B-202ENST00000622138 DUSP23Q9BVJ7 150 aa6.31□□□□□ -1.4
TRIM49B-202ENST00000622138 PHF7Q9BWX1 381 aaPredicted RBP6.31□□□□□ -1.4
TRIM49B-202ENST00000622138 SCRT2Q9NQ03 307 aa6.31□□□□□ -1.4
TRIM49B-202ENST00000622138 MRPL16Q9NX20 251 aaKnown RBP6.31□□□□□ -1.4
TRIM49B-202ENST00000622138 CNTRLQ7Z7A1 2325 aa6.3□□□□□ -1.4
TRIM49B-202ENST00000622138 NPIPA3F8WFD2 350 aa6.3□□□□□ -1.4
TRIM49B-202ENST00000622138 CRXO43186 299 aaPredicted RBP6.3□□□□□ -1.4
TRIM49B-202ENST00000622138 SERPINE2P07093 398 aa6.3□□□□□ -1.4
TRIM49B-202ENST00000622138 LIPFP07098 398 aa6.3□□□□□ -1.4
TRIM49B-202ENST00000622138 STAG3L2P0CL84 134 aa6.3□□□□□ -1.4
TRIM49B-202ENST00000622138 GLI4P10075 376 aa6.3□□□□□ -1.4
TRIM49B-202ENST00000622138 NTF3P20783 257 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms