RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 CNOT1A5YKK6 2376 aaKnown RBP7.79□□□□□ -1.16
PDPN-212ENST00000621990 TRBV24-1A0A075B6N3 115 aa7.79□□□□□ -1.16
PDPN-212ENST00000621990 TRGV8A0A0C4DH27 118 aa7.79□□□□□ -1.16
PDPN-212ENST00000621990 A8MXE2 369 aa7.79□□□□□ -1.16
PDPN-212ENST00000621990 CLDN34H7C241 214 aa7.79□□□□□ -1.16
PDPN-212ENST00000621990 SPRY3O43610 288 aa7.79□□□□□ -1.16
PDPN-212ENST00000621990 RBMXL2O75526 392 aaKnown RBP7.79□□□□□ -1.16
PDPN-212ENST00000621990 CD1BP29016 333 aa7.79□□□□□ -1.16
PDPN-212ENST00000621990 PSMB3P49720 205 aa7.79□□□□□ -1.16
PDPN-212ENST00000621990 RPP30P78346 268 aaKnown RBP7.79□□□□□ -1.16
PDPN-212ENST00000621990 SPINK9Q5DT21 86 aa7.79□□□□□ -1.16
PDPN-212ENST00000621990 PRAMEF5Q5TYX0 476 aa7.79□□□□□ -1.16
PDPN-212ENST00000621990 C1orf229Q6ZS94 237 aaPredicted RBP7.79□□□□□ -1.16
PDPN-212ENST00000621990 ZNF709Q8N972 641 aa7.79□□□□□ -1.16
PDPN-212ENST00000621990 NUP37Q8NFH4 326 aa7.79□□□□□ -1.16
PDPN-212ENST00000621990 RAB1CQ92928 201 aa7.79□□□□□ -1.16
PDPN-212ENST00000621990 S1PR3Q99500 378 aa7.79□□□□□ -1.16
PDPN-212ENST00000621990 FAM234AQ9H0X4 552 aa7.79□□□□□ -1.16
PDPN-212ENST00000621990 GFOD1Q9NXC2 390 aa7.79□□□□□ -1.16
PDPN-212ENST00000621990 RNF7Q9UBF6 113 aa7.79□□□□□ -1.16
PDPN-212ENST00000621990 PCP4L1A6NKN8 68 aa7.78□□□□□ -1.16
PDPN-212ENST00000621990 SLC31A2O15432 143 aa7.78□□□□□ -1.16
PDPN-212ENST00000621990 GFRA3O60609 400 aa7.78□□□□□ -1.16
PDPN-212ENST00000621990 IGHV1-46P01743 117 aa7.78□□□□□ -1.16
PDPN-212ENST00000621990 HOXA5P20719 270 aa7.78□□□□□ -1.16
PDPN-212ENST00000621990 ERVK-16P61578 105 aa7.78□□□□□ -1.16
PDPN-212ENST00000621990 TCF15Q12870 199 aa7.78□□□□□ -1.16
PDPN-212ENST00000621990 CT45A1Q5HYN5 189 aa7.78□□□□□ -1.16
PDPN-212ENST00000621990 TCF23Q7RTU1 214 aa7.78□□□□□ -1.16
PDPN-212ENST00000621990 ZNF439Q8NDP4 499 aa7.78□□□□□ -1.16
PDPN-212ENST00000621990 OR4A16Q8NH70 328 aa7.78□□□□□ -1.16
PDPN-212ENST00000621990 OR4S2Q8NH73 311 aa7.78□□□□□ -1.16
PDPN-212ENST00000621990 CT45A3Q8NHU0 189 aa7.78□□□□□ -1.16
PDPN-212ENST00000621990 CADP27708 2225 aa7.78□□□□□ -1.16
PDPN-212ENST00000621990 TET2Q6N021 2002 aaPredicted RBP7.78□□□□□ -1.16
PDPN-212ENST00000621990 K7EM74 188 aa7.78□□□□□ -1.16
PDPN-212ENST00000621990 PHOX2AO14813 284 aa7.78□□□□□ -1.16
PDPN-212ENST00000621990 CYB5BO43169 146 aa7.78□□□□□ -1.16
PDPN-212ENST00000621990 TGOLN2O43493 480 aa7.78□□□□□ -1.16
PDPN-212ENST00000621990 OPN1MWP04001 364 aa7.78□□□□□ -1.16
PDPN-212ENST00000621990 OPN1MW2P0DN77 364 aa7.78□□□□□ -1.16
PDPN-212ENST00000621990 OPN1MW3P0DN78 364 aa7.78□□□□□ -1.16
PDPN-212ENST00000621990 EDDM3BP56851 147 aa7.78□□□□□ -1.16
PDPN-212ENST00000621990 TLE1Q04724 770 aa7.78□□□□□ -1.16
PDPN-212ENST00000621990 KIAA0141Q14154 515 aaPredicted RBP7.78□□□□□ -1.16
PDPN-212ENST00000621990 ACOT6Q3I5F7 207 aaPredicted RBP7.78□□□□□ -1.16
PDPN-212ENST00000621990 TMEM30BQ3MIR4 351 aa7.78□□□□□ -1.16
PDPN-212ENST00000621990 UTF1Q5T230 341 aa7.78□□□□□ -1.16
PDPN-212ENST00000621990 C22orf34Q6ZV56 151 aa7.78□□□□□ -1.16
PDPN-212ENST00000621990 C1orf87Q8N0U7 546 aa7.78□□□□□ -1.16
PDPN-212ENST00000621990 TMEM170AQ8WVE7 144 aa7.78□□□□□ -1.16
PDPN-212ENST00000621990 CORO2AQ92828 525 aa7.78□□□□□ -1.16
PDPN-212ENST00000621990 GAFA1Q96PS6 74 aa7.78□□□□□ -1.16
PDPN-212ENST00000621990 TMPRSS5Q9H3S3 457 aa7.78□□□□□ -1.16
PDPN-212ENST00000621990 TMEM140Q9NV12 185 aa7.78□□□□□ -1.16
PDPN-212ENST00000621990 URGCP-MRPS24S4R325 110 aa7.78□□□□□ -1.16
PDPN-212ENST00000621990 RAI1Q7Z5J4 1906 aaPredicted RBP7.78□□□□□ -1.16
PDPN-212ENST00000621990 SVILO95425 2214 aa7.78□□□□□ -1.16
PDPN-212ENST00000621990 SAA2-SAA4A0A096LPE2 208 aa7.77□□□□□ -1.17
PDPN-212ENST00000621990 SMCO3A2RU48 225 aa7.77□□□□□ -1.17
PDPN-212ENST00000621990 CLN5O75503 358 aa7.77□□□□□ -1.17
PDPN-212ENST00000621990 SAA2P0DJI9 122 aaPredicted RBP7.77□□□□□ -1.17
PDPN-212ENST00000621990 CD40P25942 277 aa7.77□□□□□ -1.17
PDPN-212ENST00000621990 CCKARP32238 428 aa7.77□□□□□ -1.17
PDPN-212ENST00000621990 PLA2G5P39877 138 aa7.77□□□□□ -1.17
PDPN-212ENST00000621990 CTAG1AP78358 180 aa7.77□□□□□ -1.17
PDPN-212ENST00000621990 POU2AF1Q16633 256 aa7.77□□□□□ -1.17
PDPN-212ENST00000621990 TMEM241Q24JQ0 296 aa7.77□□□□□ -1.17
PDPN-212ENST00000621990 TEX36Q5VZQ5 186 aa7.77□□□□□ -1.17
PDPN-212ENST00000621990 PLPPR2Q96GM1 343 aa7.77□□□□□ -1.17
PDPN-212ENST00000621990 SMIM7Q9BQ49 75 aa7.77□□□□□ -1.17
PDPN-212ENST00000621990 TMEM14BQ9NUH8 114 aa7.77□□□□□ -1.17
PDPN-212ENST00000621990 FOXA2Q9Y261 457 aaPredicted RBP7.77□□□□□ -1.17
PDPN-212ENST00000621990 CUL9Q8IWT3 2517 aa7.77□□□□□ -1.17
PDPN-212ENST00000621990 C15orf61A6NNL5 157 aa7.77□□□□□ -1.17
PDPN-212ENST00000621990 SELLP14151 372 aa7.77□□□□□ -1.17
PDPN-212ENST00000621990 OPRK1P41145 380 aa7.77□□□□□ -1.17
PDPN-212ENST00000621990 THBS3P49746 956 aa7.77□□□□□ -1.17
PDPN-212ENST00000621990 SELENOVP59797 346 aa7.77□□□□□ -1.17
PDPN-212ENST00000621990 RPS16P62249 146 aaKnown RBP7.77□□□□□ -1.17
PDPN-212ENST00000621990 ZNF674Q2M3X9 581 aa7.77□□□□□ -1.17
PDPN-212ENST00000621990 VHLLQ6RSH7 139 aa7.77□□□□□ -1.17
PDPN-212ENST00000621990 TREML4Q6UXN2 200 aa7.77□□□□□ -1.17
PDPN-212ENST00000621990 ZNF788Q6ZQV5 615 aa7.77□□□□□ -1.17
PDPN-212ENST00000621990 VKORC1L1Q8N0U8 176 aa7.77□□□□□ -1.17
PDPN-212ENST00000621990 FAM210BQ96KR6 192 aa7.77□□□□□ -1.17
PDPN-212ENST00000621990 SMG1Q96Q15 3661 aaKnown RBP7.76□□□□□ -1.17
PDPN-212ENST00000621990 TRGV10A0A0A0MS01 117 aa7.76□□□□□ -1.17
PDPN-212ENST00000621990 TRAV3A0A0B4J244 114 aa7.76□□□□□ -1.17
PDPN-212ENST00000621990 RRHO14718 337 aa7.76□□□□□ -1.17
PDPN-212ENST00000621990 HIST1H2BKO60814 126 aa7.76□□□□□ -1.17
PDPN-212ENST00000621990 S100A9P06702 114 aaKnown RBP7.76□□□□□ -1.17
PDPN-212ENST00000621990 HIST1H2BJP06899 126 aa7.76□□□□□ -1.17
PDPN-212ENST00000621990 HIST1H2BOP23527 126 aa7.76□□□□□ -1.17
PDPN-212ENST00000621990 HIST1H2BBP33778 126 aa7.76□□□□□ -1.17
PDPN-212ENST00000621990 CDX1P47902 265 aaPredicted RBP7.76□□□□□ -1.17
PDPN-212ENST00000621990 CDC34P49427 236 aaPredicted RBP7.76□□□□□ -1.17
PDPN-212ENST00000621990 HIST1H2BDP58876 126 aa7.76□□□□□ -1.17
PDPN-212ENST00000621990 HIST1H2BCP62807 126 aa7.76□□□□□ -1.17
PDPN-212ENST00000621990 TNFAIP6P98066 277 aaPredicted RBP7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms