RNA–Protein interactions for RNA: ENST00000621783.4

CPNE3-212, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 817 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-212ENST00000621783 GRPEL2Q8TAA5 225 aa8.59□□□□□ -1.03
CPNE3-212ENST00000621783 OSR1Q8TAX0 266 aaPredicted RBP8.59□□□□□ -1.03
CPNE3-212ENST00000621783 FLYWCH2Q96CP2 140 aaKnown RBP8.59□□□□□ -1.03
CPNE3-212ENST00000621783 AJUBAQ96IF1 538 aa8.59□□□□□ -1.03
CPNE3-212ENST00000621783 TMEM140Q9NV12 185 aa8.59□□□□□ -1.03
CPNE3-212ENST00000621783 CELSR2Q9HCU4 2923 aa8.58□□□□□ -1.04
CPNE3-212ENST00000621783 PRRC2AP48634 2157 aaKnown RBP8.58□□□□□ -1.04
CPNE3-212ENST00000621783 SPG11Q96JI7 2443 aa8.58□□□□□ -1.04
CPNE3-212ENST00000621783 FXYD6-FXYD2A0A087WZ82 144 aa8.58□□□□□ -1.04
CPNE3-212ENST00000621783 K7EPK0 472 aa8.58□□□□□ -1.04
CPNE3-212ENST00000621783 SMAD7O15105 426 aaKnown RBP8.58□□□□□ -1.04
CPNE3-212ENST00000621783 VENTXO95231 258 aa8.58□□□□□ -1.04
CPNE3-212ENST00000621783 MPC2O95563 127 aa8.58□□□□□ -1.04
CPNE3-212ENST00000621783 MBPP02686 304 aaPredicted RBP8.58□□□□□ -1.04
CPNE3-212ENST00000621783 OR9G9P0C7N8 305 aa8.58□□□□□ -1.04
CPNE3-212ENST00000621783 PSMB6P28072 239 aa8.58□□□□□ -1.04
CPNE3-212ENST00000621783 OR2B8PP59922 312 aa8.58□□□□□ -1.04
CPNE3-212ENST00000621783 HABP2Q14520 560 aaPredicted RBP8.58□□□□□ -1.04
CPNE3-212ENST00000621783 KLF17Q5JT82 389 aaPredicted RBP8.58□□□□□ -1.04
CPNE3-212ENST00000621783 GPR157Q5UAW9 335 aa8.58□□□□□ -1.04
CPNE3-212ENST00000621783 OR4A47Q6IF82 309 aa8.58□□□□□ -1.04
CPNE3-212ENST00000621783 CCDC144NLQ6NUI1 221 aa8.58□□□□□ -1.04
CPNE3-212ENST00000621783 BRD3OSQ6XYD6 125 aa8.58□□□□□ -1.04
CPNE3-212ENST00000621783 FAM71E2Q8N5Q1 922 aa8.58□□□□□ -1.04
CPNE3-212ENST00000621783 OR4C13Q8NGP0 309 aa8.58□□□□□ -1.04
CPNE3-212ENST00000621783 RHOVQ96L33 236 aa8.58□□□□□ -1.04
CPNE3-212ENST00000621783 HYLS1Q96M11 299 aa8.58□□□□□ -1.04
CPNE3-212ENST00000621783 MS4A7Q9GZW8 240 aaPredicted RBP8.58□□□□□ -1.04
CPNE3-212ENST00000621783 COA4Q9NYJ1 87 aa8.58□□□□□ -1.04
CPNE3-212ENST00000621783 MBD2Q9UBB5 411 aa8.58□□□□□ -1.04
CPNE3-212ENST00000621783 ITGB1BP2Q9UKP3 347 aa8.58□□□□□ -1.04
CPNE3-212ENST00000621783 LSM5Q9Y4Y9 91 aaKnown RBP8.58□□□□□ -1.04
CPNE3-212ENST00000621783 CSMD2Q7Z408 3487 aa8.57□□□□□ -1.04
CPNE3-212ENST00000621783 FAM90A9PA6NNJ1 464 aa8.57□□□□□ -1.04
CPNE3-212ENST00000621783 SRRM4A7MD48 611 aaKnown RBP8.57□□□□□ -1.04
CPNE3-212ENST00000621783 H0YIZ8 118 aa8.57□□□□□ -1.04
CPNE3-212ENST00000621783 IGLV2-23P01705 113 aa8.57□□□□□ -1.04
CPNE3-212ENST00000621783 PET100P0DJ07 73 aa8.57□□□□□ -1.04
CPNE3-212ENST00000621783 SAA1P0DJI8 122 aaPredicted RBP8.57□□□□□ -1.04
CPNE3-212ENST00000621783 SLC25A4P12235 298 aa8.57□□□□□ -1.04
CPNE3-212ENST00000621783 CD1BP29016 333 aa8.57□□□□□ -1.04
CPNE3-212ENST00000621783 NKX2-1P43699 371 aaPredicted RBP8.57□□□□□ -1.04
CPNE3-212ENST00000621783 RPS16P62249 146 aaKnown RBP8.57□□□□□ -1.04
CPNE3-212ENST00000621783 CXorf66Q5JRM2 361 aaPredicted RBP8.57□□□□□ -1.04
CPNE3-212ENST00000621783 C11orf87Q6NUJ2 197 aa8.57□□□□□ -1.04
CPNE3-212ENST00000621783 PRSS54Q6PEW0 395 aa8.57□□□□□ -1.04
CPNE3-212ENST00000621783 FOXRED2Q8IWF2 684 aa8.57□□□□□ -1.04
CPNE3-212ENST00000621783 THAP6Q8TBB0 222 aa8.57□□□□□ -1.04
CPNE3-212ENST00000621783 MALSU1Q96EH3 234 aa8.57□□□□□ -1.04
CPNE3-212ENST00000621783 RITA1Q96K30 269 aa8.57□□□□□ -1.04
CPNE3-212ENST00000621783 PLA2G2EQ9NZK7 142 aa8.57□□□□□ -1.04
CPNE3-212ENST00000621783 OR5AC2Q9NZP5 309 aa8.57□□□□□ -1.04
CPNE3-212ENST00000621783 RCL1Q9Y2P8 373 aaKnown RBP8.57□□□□□ -1.04
CPNE3-212ENST00000621783 NSG2Q9Y328 171 aa8.57□□□□□ -1.04
CPNE3-212ENST00000621783 POMT1Q9Y6A1 747 aa8.57□□□□□ -1.04
CPNE3-212ENST00000621783 NBPF19A0A087WUL8 3843 aa8.57□□□□□ -1.04
CPNE3-212ENST00000621783 APCP25054 2843 aa8.56□□□□□ -1.04
CPNE3-212ENST00000621783 TRAV3A0A0B4J244 114 aa8.56□□□□□ -1.04
CPNE3-212ENST00000621783 C15orf61A6NNL5 157 aa8.56□□□□□ -1.04
CPNE3-212ENST00000621783 ST8SIA3O43173 380 aa8.56□□□□□ -1.04
CPNE3-212ENST00000621783 DEDDO75618 318 aa8.56□□□□□ -1.04
CPNE3-212ENST00000621783 IGKV1D-33P01593 117 aa8.56□□□□□ -1.04
CPNE3-212ENST00000621783 IGKV1-33P01594 117 aa8.56□□□□□ -1.04
CPNE3-212ENST00000621783 SNRNP70P08621 437 aaKnown RBP8.56□□□□□ -1.04
CPNE3-212ENST00000621783 IL6RP08887 468 aaPredicted RBP8.56□□□□□ -1.04
CPNE3-212ENST00000621783 LYL1P12980 280 aa8.56□□□□□ -1.04
CPNE3-212ENST00000621783 ARHGDIBP52566 201 aa8.56□□□□□ -1.04
CPNE3-212ENST00000621783 POLR2GP62487 172 aaKnown RBP eCLIP8.56□□□□□ -1.04
CPNE3-212ENST00000621783 RELBQ01201 579 aa8.56□□□□□ -1.04
CPNE3-212ENST00000621783 ID3Q02535 119 aa8.56□□□□□ -1.04
CPNE3-212ENST00000621783 FBLN7Q53RD9 439 aa8.56□□□□□ -1.04
CPNE3-212ENST00000621783 PUSL1Q8N0Z8 303 aaKnown RBP8.56□□□□□ -1.04
CPNE3-212ENST00000621783 DCUN1D4Q92564 292 aa8.56□□□□□ -1.04
CPNE3-212ENST00000621783 AIFM2Q9BRQ8 373 aa8.56□□□□□ -1.04
CPNE3-212ENST00000621783 RNF126Q9BV68 326 aa8.56□□□□□ -1.04
CPNE3-212ENST00000621783 QTRT1Q9BXR0 403 aaKnown RBP8.56□□□□□ -1.04
CPNE3-212ENST00000621783 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.56□□□□□ -1.04
CPNE3-212ENST00000621783 ZFP57Q9NU63 452 aa8.56□□□□□ -1.04
CPNE3-212ENST00000621783 BET1LQ9NYM9 111 aa8.56□□□□□ -1.04
CPNE3-212ENST00000621783 POLQO75417 2590 aa8.56□□□□□ -1.04
CPNE3-212ENST00000621783 A0A0U1RQK1 487 aa8.55□□□□□ -1.04
CPNE3-212ENST00000621783 FAM90A26D6RGX4 464 aa8.55□□□□□ -1.04
CPNE3-212ENST00000621783 UPK2O00526 184 aa8.55□□□□□ -1.04
CPNE3-212ENST00000621783 ARPC5O15511 151 aa8.55□□□□□ -1.04
CPNE3-212ENST00000621783 SLC25A17O43808 307 aa8.55□□□□□ -1.04
CPNE3-212ENST00000621783 SSSCA1O60232 199 aa8.55□□□□□ -1.04
CPNE3-212ENST00000621783 RBMXL2O75526 392 aaKnown RBP8.55□□□□□ -1.04
CPNE3-212ENST00000621783 SNAPC5O75971 98 aa8.55□□□□□ -1.04
CPNE3-212ENST00000621783 KBTBD11O94819 623 aa8.55□□□□□ -1.04
CPNE3-212ENST00000621783 FSHBP01225 129 aa8.55□□□□□ -1.04
CPNE3-212ENST00000621783 CD24P25063 80 aa8.55□□□□□ -1.04
CPNE3-212ENST00000621783 CNTFRP26992 372 aa8.55□□□□□ -1.04
CPNE3-212ENST00000621783 UBE2KP61086 200 aa8.55□□□□□ -1.04
CPNE3-212ENST00000621783 VMA21Q3ZAQ7 101 aa8.55□□□□□ -1.04
CPNE3-212ENST00000621783 AARDQ4LEZ3 155 aa8.55□□□□□ -1.04
CPNE3-212ENST00000621783 C9orf62Q8N4C0 152 aa8.55□□□□□ -1.04
CPNE3-212ENST00000621783 OR4A16Q8NH70 328 aa8.55□□□□□ -1.04
CPNE3-212ENST00000621783 TSNAXQ99598 290 aaKnown RBP8.55□□□□□ -1.04
CPNE3-212ENST00000621783 MAGT1Q9H0U3 335 aa8.55□□□□□ -1.04
CPNE3-212ENST00000621783 C11orf1Q9H5F2 150 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms