RNA–Protein interactions for RNA: ENST00000621269.4

ATXN3-253, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 936 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-253ENST00000621269 ZMAT4Q9H898 229 aa18.37■□□□□ 0.53
ATXN3-253ENST00000621269 ZNF430Q9H8G1 570 aaPredicted RBP18.37■□□□□ 0.53
ATXN3-253ENST00000621269 ANXA10Q9UJ72 324 aa18.37■□□□□ 0.53
ATXN3-253ENST00000621269 RBMX2Q9Y388 322 aaKnown RBP18.37■□□□□ 0.53
ATXN3-253ENST00000621269 C3orf84H3BNL1 204 aa18.36■□□□□ 0.53
ATXN3-253ENST00000621269 SAA1P0DJI8 122 aaPredicted RBP18.36■□□□□ 0.53
ATXN3-253ENST00000621269 SDC2P34741 201 aa18.36■□□□□ 0.53
ATXN3-253ENST00000621269 OR2B11Q5JQS5 317 aa18.36■□□□□ 0.53
ATXN3-253ENST00000621269 MMD2Q8IY49 270 aa18.36■□□□□ 0.53
ATXN3-253ENST00000621269 SPIN2AQ99865 258 aa18.36■□□□□ 0.53
ATXN3-253ENST00000621269 SPIN2BQ9BPZ2 258 aa18.36■□□□□ 0.53
ATXN3-253ENST00000621269 OR51E2Q9H255 320 aa18.36■□□□□ 0.53
ATXN3-253ENST00000621269 RHBDL2Q9NX52 303 aa18.36■□□□□ 0.53
ATXN3-253ENST00000621269 MXD1Q05195 221 aa18.35■□□□□ 0.53
ATXN3-253ENST00000621269 RPEL1Q2QD12 228 aa18.35■□□□□ 0.53
ATXN3-253ENST00000621269 SNAPC3Q92966 411 aa18.35■□□□□ 0.53
ATXN3-253ENST00000621269 HSD17B10Q99714 261 aaKnown RBP18.35■□□□□ 0.53
ATXN3-253ENST00000621269 IGKV1D-13A0A0B4J2D9 117 aa18.34■□□□□ 0.53
ATXN3-253ENST00000621269 FAM223BA6NKX1 122 aa18.34■□□□□ 0.53
ATXN3-253ENST00000621269 H0Y980 276 aa18.34■□□□□ 0.53
ATXN3-253ENST00000621269 SSX5O60225 188 aa18.34■□□□□ 0.53
ATXN3-253ENST00000621269 TRBV12-3P01733 135 aa18.34■□□□□ 0.53
ATXN3-253ENST00000621269 IGKV1-13P0DP09 117 aa18.34■□□□□ 0.53
ATXN3-253ENST00000621269 RHOGP84095 191 aa18.34■□□□□ 0.53
ATXN3-253ENST00000621269 ATP5G2Q06055 141 aa18.34■□□□□ 0.53
ATXN3-253ENST00000621269 ZNF773Q6PK81 442 aa18.34■□□□□ 0.53
ATXN3-253ENST00000621269 FAM223AQ8IWN6 122 aa18.34■□□□□ 0.53
ATXN3-253ENST00000621269 SGPP2Q8IWX5 399 aa18.34■□□□□ 0.53
ATXN3-253ENST00000621269 TCTEX1D2Q8WW35 142 aa18.34■□□□□ 0.53
ATXN3-253ENST00000621269 IGLV2-14P01704 120 aa18.33■□□□□ 0.52
ATXN3-253ENST00000621269 IGHV4-30-4P0DP06 118 aa18.33■□□□□ 0.52
ATXN3-253ENST00000621269 SCAND1P57086 179 aa18.33■□□□□ 0.52
ATXN3-253ENST00000621269 RPL30P62888 115 aaKnown RBP18.33■□□□□ 0.52
ATXN3-253ENST00000621269 IL34Q6ZMJ4 242 aa18.33■□□□□ 0.52
ATXN3-253ENST00000621269 Q8N1Y9 231 aa18.33■□□□□ 0.52
ATXN3-253ENST00000621269 OR4S2Q8NH73 311 aa18.33■□□□□ 0.52
ATXN3-253ENST00000621269 VSTM2AQ8TAG5 236 aa18.33■□□□□ 0.52
ATXN3-253ENST00000621269 AKIP1Q9NQ31 210 aa18.33■□□□□ 0.52
ATXN3-253ENST00000621269 SPATA2Q9UM82 520 aa18.33■□□□□ 0.52
ATXN3-253ENST00000621269 ETV7Q9Y603 341 aa18.33■□□□□ 0.52
ATXN3-253ENST00000621269 LOC100506127A0A0U1RQW1 187 aa18.32■□□□□ 0.52
ATXN3-253ENST00000621269 RBMXL2O75526 392 aaKnown RBP18.32■□□□□ 0.52
ATXN3-253ENST00000621269 PRH1P02810 166 aa18.32■□□□□ 0.52
ATXN3-253ENST00000621269 CLEC2LP0C7M8 214 aa18.32■□□□□ 0.52
ATXN3-253ENST00000621269 ARPC4P59998 168 aa18.32■□□□□ 0.52
ATXN3-253ENST00000621269 IDNKQ5T6J7 187 aa18.32■□□□□ 0.52
ATXN3-253ENST00000621269 SLC25A42Q86VD7 318 aa18.32■□□□□ 0.52
ATXN3-253ENST00000621269 VKORC1L1Q8N0U8 176 aa18.32■□□□□ 0.52
ATXN3-253ENST00000621269 TTC9CQ8N5M4 171 aa18.32■□□□□ 0.52
ATXN3-253ENST00000621269 ADAM30Q9UKF2 790 aa18.32■□□□□ 0.52
ATXN3-253ENST00000621269 SORL1Q92673 2214 aa18.31■□□□□ 0.52
ATXN3-253ENST00000621269 TRAV18A0A075B6X5 111 aa18.31■□□□□ 0.52
ATXN3-253ENST00000621269 OR2A4O95047 310 aa18.31■□□□□ 0.52
ATXN3-253ENST00000621269 EXOSC2Q13868 293 aaKnown RBP18.31■□□□□ 0.52
ATXN3-253ENST00000621269 C10orf55Q5SWW7 151 aa18.31■□□□□ 0.52
ATXN3-253ENST00000621269 MFSD4AQ8N468 514 aa18.31■□□□□ 0.52
ATXN3-253ENST00000621269 OR2A7Q96R45 310 aa18.31■□□□□ 0.52
ATXN3-253ENST00000621269 TAS2R8Q9NYW2 309 aa18.31■□□□□ 0.52
ATXN3-253ENST00000621269 PEMTQ9UBM1 199 aa18.31■□□□□ 0.52
ATXN3-253ENST00000621269 TRBV9A0A0B4J1U6 114 aa18.3■□□□□ 0.52
ATXN3-253ENST00000621269 CSN3P07498 182 aa18.3■□□□□ 0.52
ATXN3-253ENST00000621269 ZNF45Q02386 682 aa18.3■□□□□ 0.52
ATXN3-253ENST00000621269 LCN12Q6JVE5 192 aa18.3■□□□□ 0.52
ATXN3-253ENST00000621269 ZNF66Q6ZN08 573 aa18.3■□□□□ 0.52
ATXN3-253ENST00000621269 NECAP1Q8NC96 275 aa18.3■□□□□ 0.52
ATXN3-253ENST00000621269 BEST4Q8NFU0 473 aa18.3■□□□□ 0.52
ATXN3-253ENST00000621269 OR5H6Q8NGV6 325 aa18.3■□□□□ 0.52
ATXN3-253ENST00000621269 MUC7Q8TAX7 377 aa18.3■□□□□ 0.52
ATXN3-253ENST00000621269 RNF167Q9H6Y7 350 aa18.3■□□□□ 0.52
ATXN3-253ENST00000621269 SIGLEC8Q9NYZ4 499 aa18.3■□□□□ 0.52
ATXN3-253ENST00000621269 DPPA5A6NC42 116 aa18.29■□□□□ 0.52
ATXN3-253ENST00000621269 A8MZ25 164 aa18.29■□□□□ 0.52
ATXN3-253ENST00000621269 KBTBD11O94819 623 aa18.29■□□□□ 0.52
ATXN3-253ENST00000621269 GTSCR1Q86UQ5 136 aa18.29■□□□□ 0.52
ATXN3-253ENST00000621269 SLC25A38Q96DW6 304 aa18.29■□□□□ 0.52
ATXN3-253ENST00000621269 DIABLOQ9NR28 239 aa18.29■□□□□ 0.52
ATXN3-253ENST00000621269 C19orf73Q9NVV2 129 aa18.29■□□□□ 0.52
ATXN3-253ENST00000621269 A0A0A6YYH2 397 aa18.28■□□□□ 0.52
ATXN3-253ENST00000621269 A6NJ64 397 aa18.28■□□□□ 0.52
ATXN3-253ENST00000621269 AIREO43918 545 aa18.28■□□□□ 0.52
ATXN3-253ENST00000621269 HRASP01112 189 aa18.28■□□□□ 0.52
ATXN3-253ENST00000621269 FCGR2CP31995 323 aa18.28■□□□□ 0.52
ATXN3-253ENST00000621269 EIF4EBP1Q13541 118 aaPredicted RBP18.28■□□□□ 0.52
ATXN3-253ENST00000621269 NEDD8Q15843 81 aa18.28■□□□□ 0.52
ATXN3-253ENST00000621269 FAM209BQ5JX69 171 aa18.28■□□□□ 0.52
ATXN3-253ENST00000621269 Q8N402 240 aa18.28■□□□□ 0.52
ATXN3-253ENST00000621269 GVQW1Q8N7I0 195 aa18.28■□□□□ 0.52
ATXN3-253ENST00000621269 SECTM1Q8WVN6 248 aa18.28■□□□□ 0.52
ATXN3-253ENST00000621269 ZNF257Q9Y2Q1 563 aa18.28■□□□□ 0.52
ATXN3-253ENST00000621269 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP18.27■□□□□ 0.52
ATXN3-253ENST00000621269 HMX3A6NHT5 357 aa18.27■□□□□ 0.52
ATXN3-253ENST00000621269 BMPR1BO00238 502 aa18.27■□□□□ 0.52
ATXN3-253ENST00000621269 OR2J3O76001 311 aa18.27■□□□□ 0.52
ATXN3-253ENST00000621269 MAS1LP35410 378 aa18.27■□□□□ 0.52
ATXN3-253ENST00000621269 KIR2DS2P43631 304 aa18.27■□□□□ 0.52
ATXN3-253ENST00000621269 RPL27AP46776 148 aaKnown RBP18.27■□□□□ 0.52
ATXN3-253ENST00000621269 HOGA1Q86XE5 327 aa18.27■□□□□ 0.52
ATXN3-253ENST00000621269 PUSL1Q8N0Z8 303 aaKnown RBP18.27■□□□□ 0.52
ATXN3-253ENST00000621269 TMEM167AQ8TBQ9 72 aa18.27■□□□□ 0.52
ATXN3-253ENST00000621269 FYTTD1Q96QD9 318 aaKnown RBP18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 118.2 ms