RNA–Protein interactions for RNA: ENST00000619438.4

SGMS1-210, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-210ENST00000619438 FGFRL1Q8N441 504 aa17.64■□□□□ 0.42
SGMS1-210ENST00000619438 HSD17B11Q8NBQ5 300 aa17.64■□□□□ 0.42
SGMS1-210ENST00000619438 Q8TCH9 128 aa17.64■□□□□ 0.42
SGMS1-210ENST00000619438 GNPNAT1Q96EK6 184 aaPredicted RBP17.64■□□□□ 0.42
SGMS1-210ENST00000619438 NKX6-2Q9C056 277 aaPredicted RBP17.64■□□□□ 0.42
SGMS1-210ENST00000619438 SH3BGRL3Q9H299 93 aa17.64■□□□□ 0.42
SGMS1-210ENST00000619438 PATZ1Q9HBE1 687 aaKnown RBP17.64■□□□□ 0.42
SGMS1-210ENST00000619438 K7N7A8 449 aa17.64■□□□□ 0.41
SGMS1-210ENST00000619438 SRD5A1P18405 259 aa17.64■□□□□ 0.41
SGMS1-210ENST00000619438 PPP1CCP36873 323 aaKnown RBP17.64■□□□□ 0.41
SGMS1-210ENST00000619438 SULT1A1P50225 295 aa17.64■□□□□ 0.41
SGMS1-210ENST00000619438 LCN2P80188 198 aa17.64■□□□□ 0.41
SGMS1-210ENST00000619438 TAGLNQ01995 201 aaKnown RBP17.64■□□□□ 0.41
SGMS1-210ENST00000619438 CLINT1Q14677 625 aa17.64■□□□□ 0.41
SGMS1-210ENST00000619438 DEFB108BQ8NET1 73 aa17.64■□□□□ 0.41
SGMS1-210ENST00000619438 EDARADDQ8WWZ3 215 aa17.64■□□□□ 0.41
SGMS1-210ENST00000619438 ATP5SQ99766 215 aa17.64■□□□□ 0.41
SGMS1-210ENST00000619438 C19orf12Q9NSK7 152 aa17.64■□□□□ 0.41
SGMS1-210ENST00000619438 JPT1Q9UK76 154 aa17.64■□□□□ 0.41
SGMS1-210ENST00000619438 KIAA2026Q5HYC2 2103 aa17.63■□□□□ 0.41
SGMS1-210ENST00000619438 F8W036 122 aa17.63■□□□□ 0.41
SGMS1-210ENST00000619438 TSPAN15O95858 294 aa17.63■□□□□ 0.41
SGMS1-210ENST00000619438 OMGP23515 440 aa17.63■□□□□ 0.41
SGMS1-210ENST00000619438 ATP6V0CP27449 155 aa17.63■□□□□ 0.41
SGMS1-210ENST00000619438 SRP14P37108 136 aaKnown RBP17.63■□□□□ 0.41
SGMS1-210ENST00000619438 CAMLGP49069 296 aa17.63■□□□□ 0.41
SGMS1-210ENST00000619438 RPL30P62888 115 aaKnown RBP17.63■□□□□ 0.41
SGMS1-210ENST00000619438 HSD17B10Q99714 261 aaKnown RBP17.63■□□□□ 0.41
SGMS1-210ENST00000619438 RNF150Q9ULK6 438 aa17.63■□□□□ 0.41
SGMS1-210ENST00000619438 TANC2Q9HCD6 1990 aa17.63■□□□□ 0.41
SGMS1-210ENST00000619438 FOXH1O75593 365 aa17.62■□□□□ 0.41
SGMS1-210ENST00000619438 CST7O76096 145 aa17.62■□□□□ 0.41
SGMS1-210ENST00000619438 SNCAP37840 140 aa17.62■□□□□ 0.41
SGMS1-210ENST00000619438 TPRX1Q8N7U7 411 aa17.62■□□□□ 0.41
SGMS1-210ENST00000619438 SREK1IP1Q8N9Q2 155 aaPredicted RBP17.62■□□□□ 0.41
SGMS1-210ENST00000619438 AGMATQ9BSE5 352 aa17.62■□□□□ 0.41
SGMS1-210ENST00000619438 HIPK2Q9H2X6 1198 aa17.62■□□□□ 0.41
SGMS1-210ENST00000619438 DNASE2O00115 360 aaPredicted RBP17.61■□□□□ 0.41
SGMS1-210ENST00000619438 F2RL2O00254 374 aa17.61■□□□□ 0.41
SGMS1-210ENST00000619438 SIGLEC5O15389 551 aa17.61■□□□□ 0.41
SGMS1-210ENST00000619438 IZUMO4Q1ZYL8 232 aa17.61■□□□□ 0.41
SGMS1-210ENST00000619438 MIDNQ504T8 468 aa17.61■□□□□ 0.41
SGMS1-210ENST00000619438 MIOXQ9UGB7 285 aa17.61■□□□□ 0.41
SGMS1-210ENST00000619438 YPEL1O60688 119 aa17.61■□□□□ 0.41
SGMS1-210ENST00000619438 EDDM3AQ14507 147 aa17.61■□□□□ 0.41
SGMS1-210ENST00000619438 PUSL1Q8N0Z8 303 aaKnown RBP17.61■□□□□ 0.41
SGMS1-210ENST00000619438 ZNF561Q8N587 486 aa17.61■□□□□ 0.41
SGMS1-210ENST00000619438 LFNGQ8NES3 379 aa17.61■□□□□ 0.41
SGMS1-210ENST00000619438 SDSLQ96GA7 329 aa17.61■□□□□ 0.41
SGMS1-210ENST00000619438 YPEL2Q96QA6 119 aa17.61■□□□□ 0.41
SGMS1-210ENST00000619438 RAB9BQ9NP90 201 aa17.61■□□□□ 0.41
SGMS1-210ENST00000619438 OR6C3Q9NZP0 311 aa17.61■□□□□ 0.41
SGMS1-210ENST00000619438 FAM96BQ9Y3D0 163 aa17.61■□□□□ 0.41
SGMS1-210ENST00000619438 A0A1B0GW64 132 aa17.6■□□□□ 0.41
SGMS1-210ENST00000619438 ITGB1BP1O14713 200 aa17.6■□□□□ 0.41
SGMS1-210ENST00000619438 NXPH3O95157 252 aa17.6■□□□□ 0.41
SGMS1-210ENST00000619438 PRH1P02810 166 aa17.6■□□□□ 0.41
SGMS1-210ENST00000619438 BRWD1-AS2P59051 145 aa17.6■□□□□ 0.41
SGMS1-210ENST00000619438 FAM53AQ6NSI3 398 aaPredicted RBP17.6■□□□□ 0.41
SGMS1-210ENST00000619438 OR2G3Q8NGZ4 309 aa17.6■□□□□ 0.41
SGMS1-210ENST00000619438 CD300LFQ8TDQ1 290 aa17.6■□□□□ 0.41
SGMS1-210ENST00000619438 SCRT1Q9BWW7 348 aa17.6■□□□□ 0.41
SGMS1-210ENST00000619438 TMEM231Q9H6L2 316 aa17.6■□□□□ 0.41
SGMS1-210ENST00000619438 HSPB7Q9UBY9 170 aa17.6■□□□□ 0.41
SGMS1-210ENST00000619438 FBN1P35555 2871 aaKnown RBP17.59■□□□□ 0.41
SGMS1-210ENST00000619438 RAMP3O60896 148 aa17.59■□□□□ 0.41
SGMS1-210ENST00000619438 FSTL3O95633 263 aa17.59■□□□□ 0.41
SGMS1-210ENST00000619438 CGB3P0DN86 165 aa17.59■□□□□ 0.41
SGMS1-210ENST00000619438 CGB7P0DN87 165 aa17.59■□□□□ 0.41
SGMS1-210ENST00000619438 ZFP36P26651 326 aaKnown RBP17.59■□□□□ 0.41
SGMS1-210ENST00000619438 ZNF616Q08AN1 781 aa17.59■□□□□ 0.41
SGMS1-210ENST00000619438 GUCA2BQ16661 112 aa17.59■□□□□ 0.41
SGMS1-210ENST00000619438 TMEM182Q6ZP80 229 aaPredicted RBP17.59■□□□□ 0.41
SGMS1-210ENST00000619438 PSENENQ9NZ42 101 aa17.59■□□□□ 0.41
SGMS1-210ENST00000619438 ATRQ13535 2644 aa17.58■□□□□ 0.41
SGMS1-210ENST00000619438 IGHV3OR15-7A0A075B7D8 119 aa17.58■□□□□ 0.41
SGMS1-210ENST00000619438 RAB29O14966 203 aa17.58■□□□□ 0.41
SGMS1-210ENST00000619438 SNAPINO95295 136 aa17.58■□□□□ 0.41
SGMS1-210ENST00000619438 ARHGDIBP52566 201 aa17.58■□□□□ 0.41
SGMS1-210ENST00000619438 MORN2Q502X0 79 aa17.58■□□□□ 0.41
SGMS1-210ENST00000619438 STUMQ69YW2 141 aa17.58■□□□□ 0.41
SGMS1-210ENST00000619438 DPPA3Q6W0C5 159 aa17.58■□□□□ 0.41
SGMS1-210ENST00000619438 TMEM217Q8N7C4 229 aa17.58■□□□□ 0.41
SGMS1-210ENST00000619438 OR8B3Q8NGG8 313 aa17.58■□□□□ 0.41
SGMS1-210ENST00000619438 RFESDQ8TAC1 157 aa17.58■□□□□ 0.41
SGMS1-210ENST00000619438 TCTEX1D2Q8WW35 142 aa17.58■□□□□ 0.41
SGMS1-210ENST00000619438 NEIL1Q96FI4 390 aaPredicted RBP17.58■□□□□ 0.41
SGMS1-210ENST00000619438 OR8B2Q96RD0 313 aa17.58■□□□□ 0.41
SGMS1-210ENST00000619438 DCTN5Q9BTE1 182 aa17.58■□□□□ 0.41
SGMS1-210ENST00000619438 TRAV38-1A0A0B4J264 116 aa17.58■□□□□ 0.4
SGMS1-210ENST00000619438 C17orf98A8MV24 154 aa17.58■□□□□ 0.4
SGMS1-210ENST00000619438 SFTA3P0C7M3 94 aa17.58■□□□□ 0.4
SGMS1-210ENST00000619438 GATA3P23771 443 aa17.58■□□□□ 0.4
SGMS1-210ENST00000619438 CD80P33681 288 aa17.58■□□□□ 0.4
SGMS1-210ENST00000619438 FHITP49789 147 aa17.58■□□□□ 0.4
SGMS1-210ENST00000619438 LOXL3P58215 753 aa17.58■□□□□ 0.4
SGMS1-210ENST00000619438 GNB2P62879 340 aa17.58■□□□□ 0.4
SGMS1-210ENST00000619438 TNFRSF9Q07011 255 aa17.58■□□□□ 0.4
SGMS1-210ENST00000619438 PEA15Q15121 130 aa17.58■□□□□ 0.4
SGMS1-210ENST00000619438 SSBP3Q9BWW4 388 aaPredicted RBP17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms