RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 IFNA5P01569 189 aa6.93□□□□□ -1.3
GPC6-202ENST00000617456 RBP4P02753 201 aa6.93□□□□□ -1.3
GPC6-202ENST00000617456 TTRP02766 147 aa6.93□□□□□ -1.3
GPC6-202ENST00000617456 ARG1P05089 322 aa6.93□□□□□ -1.3
GPC6-202ENST00000617456 PGA5P0DJD9 388 aa6.93□□□□□ -1.3
GPC6-202ENST00000617456 PSG2P11465 335 aa6.93□□□□□ -1.3
GPC6-202ENST00000617456 PSMA1P25786 263 aaKnown RBP6.93□□□□□ -1.3
GPC6-202ENST00000617456 HTR1FP30939 366 aa6.93□□□□□ -1.3
GPC6-202ENST00000617456 SSTR5P35346 364 aa6.93□□□□□ -1.3
GPC6-202ENST00000617456 SAA4P35542 130 aa6.93□□□□□ -1.3
GPC6-202ENST00000617456 CEACAM3P40198 252 aa6.93□□□□□ -1.3
GPC6-202ENST00000617456 RAB7AP51149 207 aa6.93□□□□□ -1.3
GPC6-202ENST00000617456 GPM6AP51674 278 aa6.93□□□□□ -1.3
GPC6-202ENST00000617456 ERVFRD-1P60508 538 aa6.93□□□□□ -1.3
GPC6-202ENST00000617456 KIAA0141Q14154 515 aaPredicted RBP6.93□□□□□ -1.3
GPC6-202ENST00000617456 KHDC3LQ587J8 217 aa6.93□□□□□ -1.3
GPC6-202ENST00000617456 COA6Q5JTJ3 125 aaKnown RBP6.93□□□□□ -1.3
GPC6-202ENST00000617456 STEAP1BQ6NZ63 245 aa6.93□□□□□ -1.3
GPC6-202ENST00000617456 FAM131AQ6UXB0 335 aa6.93□□□□□ -1.3
GPC6-202ENST00000617456 ZNF367Q7RTV3 350 aa6.93□□□□□ -1.3
GPC6-202ENST00000617456 JAGN1Q8N5M9 183 aa6.93□□□□□ -1.3
GPC6-202ENST00000617456 FAM216BQ8N7L0 139 aa6.93□□□□□ -1.3
GPC6-202ENST00000617456 Q8N7P7 452 aa6.93□□□□□ -1.3
GPC6-202ENST00000617456 OR51G2Q8NGK0 314 aa6.93□□□□□ -1.3
GPC6-202ENST00000617456 OR2T35Q8NGX2 323 aa6.93□□□□□ -1.3
GPC6-202ENST00000617456 OR2T6Q8NHC8 308 aa6.93□□□□□ -1.3
GPC6-202ENST00000617456 OR51E1Q8TCB6 317 aa6.93□□□□□ -1.3
GPC6-202ENST00000617456 CASTOR1Q8WTX7 329 aa6.93□□□□□ -1.3
GPC6-202ENST00000617456 CFHR4Q92496 578 aa6.93□□□□□ -1.3
GPC6-202ENST00000617456 EAF1Q96JC9 268 aaPredicted RBP6.93□□□□□ -1.3
GPC6-202ENST00000617456 TP53RKQ96S44 253 aa6.93□□□□□ -1.3
GPC6-202ENST00000617456 CDCA4Q9BXL8 241 aa6.93□□□□□ -1.3
GPC6-202ENST00000617456 GABARAPL3Q9BY60 117 aa6.93□□□□□ -1.3
GPC6-202ENST00000617456 MEGF9Q9H1U4 602 aa6.93□□□□□ -1.3
GPC6-202ENST00000617456 WDR13Q9H1Z4 485 aa6.93□□□□□ -1.3
GPC6-202ENST00000617456 HES4Q9HCC6 221 aa6.93□□□□□ -1.3
GPC6-202ENST00000617456 RAB18Q9NP72 206 aa6.93□□□□□ -1.3
GPC6-202ENST00000617456 PLEKHJ1Q9NW61 149 aa6.93□□□□□ -1.3
GPC6-202ENST00000617456 MRPL27Q9P0M9 148 aaKnown RBP6.93□□□□□ -1.3
GPC6-202ENST00000617456 STEAP1Q9UHE8 339 aa6.93□□□□□ -1.3
GPC6-202ENST00000617456 ST3GAL6Q9Y274 331 aa6.93□□□□□ -1.3
GPC6-202ENST00000617456 PIGLQ9Y2B2 252 aa6.93□□□□□ -1.3
GPC6-202ENST00000617456 EXOSC1Q9Y3B2 195 aaKnown RBP6.93□□□□□ -1.3
GPC6-202ENST00000617456 IGKV1D-17A0A075B6S4 117 aa6.92□□□□□ -1.3
GPC6-202ENST00000617456 J3QT63 122 aa6.92□□□□□ -1.3
GPC6-202ENST00000617456 YIF1AO95070 293 aa6.92□□□□□ -1.3
GPC6-202ENST00000617456 AMBPP02760 352 aa6.92□□□□□ -1.3
GPC6-202ENST00000617456 CD28P10747 220 aa6.92□□□□□ -1.3
GPC6-202ENST00000617456 GABRB1P18505 474 aa6.92□□□□□ -1.3
GPC6-202ENST00000617456 CXCL3P19876 107 aa6.92□□□□□ -1.3
GPC6-202ENST00000617456 KIR2DS4P43632 304 aa6.92□□□□□ -1.3
GPC6-202ENST00000617456 ERVK11-1P61568 191 aa6.92□□□□□ -1.3
GPC6-202ENST00000617456 RPL23AP62750 156 aaKnown RBP6.92□□□□□ -1.3
GPC6-202ENST00000617456 PRSS8Q16651 343 aa6.92□□□□□ -1.3
GPC6-202ENST00000617456 DEFB121Q5J5C9 76 aa6.92□□□□□ -1.3
GPC6-202ENST00000617456 BCL2L15Q5TBC7 163 aa6.92□□□□□ -1.3
GPC6-202ENST00000617456 ALKAL2Q6UX46 152 aa6.92□□□□□ -1.3
GPC6-202ENST00000617456 ACP7Q6ZNF0 438 aa6.92□□□□□ -1.3
GPC6-202ENST00000617456 OR2W3Q7Z3T1 314 aa6.92□□□□□ -1.3
GPC6-202ENST00000617456 SLC35E3Q7Z769 313 aa6.92□□□□□ -1.3
GPC6-202ENST00000617456 SLC35F2Q8IXU6 374 aa6.92□□□□□ -1.3
GPC6-202ENST00000617456 Q8IYB0 196 aa6.92□□□□□ -1.3
GPC6-202ENST00000617456 BATF2Q8N1L9 274 aa6.92□□□□□ -1.3
GPC6-202ENST00000617456 TCEANCQ8N8B7 351 aa6.92□□□□□ -1.3
GPC6-202ENST00000617456 TMEM185AQ8NFB2 350 aa6.92□□□□□ -1.3
GPC6-202ENST00000617456 OR14K1Q8NGZ2 314 aa6.92□□□□□ -1.3
GPC6-202ENST00000617456 PP6455Q8WZ26 134 aa6.92□□□□□ -1.3
GPC6-202ENST00000617456 H1FXQ92522 213 aaKnown RBP6.92□□□□□ -1.3
GPC6-202ENST00000617456 C5orf30Q96GV9 206 aa6.92□□□□□ -1.3
GPC6-202ENST00000617456 IL4I1Q96RQ9 567 aa6.92□□□□□ -1.3
GPC6-202ENST00000617456 NKX3-1Q99801 234 aaPredicted RBP6.92□□□□□ -1.3
GPC6-202ENST00000617456 NRIP2Q9BQI9 281 aa6.92□□□□□ -1.3
GPC6-202ENST00000617456 FAAP24Q9BTP7 215 aa6.92□□□□□ -1.3
GPC6-202ENST00000617456 FGF23Q9GZV9 251 aaPredicted RBP6.92□□□□□ -1.3
GPC6-202ENST00000617456 UQCC1Q9NVA1 299 aa6.92□□□□□ -1.3
GPC6-202ENST00000617456 COMMD3Q9UBI1 195 aa6.92□□□□□ -1.3
GPC6-202ENST00000617456 A0A1B0GTI1 187 aa6.91□□□□□ -1.3
GPC6-202ENST00000617456 ANKRD20A5PA0PJZ0 165 aa6.91□□□□□ -1.3
GPC6-202ENST00000617456 CORTO00230 105 aa6.91□□□□□ -1.3
GPC6-202ENST00000617456 GOSR2O14653 212 aa6.91□□□□□ -1.3
GPC6-202ENST00000617456 SIX6O95475 246 aa6.91□□□□□ -1.3
GPC6-202ENST00000617456 ISG15P05161 165 aa6.91□□□□□ -1.3
GPC6-202ENST00000617456 OR13C7P0DN81 318 aa6.91□□□□□ -1.3
GPC6-202ENST00000617456 IGLL1P15814 213 aa6.91□□□□□ -1.3
GPC6-202ENST00000617456 FAHP16930 419 aa6.91□□□□□ -1.3
GPC6-202ENST00000617456 RAB6AP20340 208 aa6.91□□□□□ -1.3
GPC6-202ENST00000617456 PRDX2P32119 198 aa6.91□□□□□ -1.3
GPC6-202ENST00000617456 FUT6P51993 359 aa6.91□□□□□ -1.3
GPC6-202ENST00000617456 FABP5Q01469 135 aa6.91□□□□□ -1.3
GPC6-202ENST00000617456 HEPN1Q6WQI6 88 aa6.91□□□□□ -1.3
GPC6-202ENST00000617456 OR1L6Q8NGR2 347 aa6.91□□□□□ -1.3
GPC6-202ENST00000617456 HAVCR2Q8TDQ0 301 aa6.91□□□□□ -1.3
GPC6-202ENST00000617456 APH1BQ8WW43 257 aa6.91□□□□□ -1.3
GPC6-202ENST00000617456 ARL11Q969Q4 196 aa6.91□□□□□ -1.3
GPC6-202ENST00000617456 SEH1LQ96EE3 360 aa6.91□□□□□ -1.3
GPC6-202ENST00000617456 SLC35E1Q96K37 410 aa6.91□□□□□ -1.3
GPC6-202ENST00000617456 MIEN1Q9BRT3 115 aa6.91□□□□□ -1.3
GPC6-202ENST00000617456 CHRDL1Q9BU40 450 aa6.91□□□□□ -1.3
GPC6-202ENST00000617456 SPANXA1Q9NS26 97 aa6.91□□□□□ -1.3
GPC6-202ENST00000617456 PIPOXQ9P0Z9 390 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms