RNA–Protein interactions for RNA: ENST00000616973.4

NR1H3-235, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1H3, Length 1,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-235ENST00000616973 OR2B8PP59922 312 aa12.92□□□□□ -0.34
NR1H3-235ENST00000616973 RPP30P78346 268 aaKnown RBP12.92□□□□□ -0.34
NR1H3-235ENST00000616973 KHDC3LQ587J8 217 aa12.92□□□□□ -0.34
NR1H3-235ENST00000616973 ZNF383Q8NA42 475 aa12.92□□□□□ -0.34
NR1H3-235ENST00000616973 VSIRQ9H7M9 311 aa12.92□□□□□ -0.34
NR1H3-235ENST00000616973 DYNLRB1Q9NP97 96 aa12.92□□□□□ -0.34
NR1H3-235ENST00000616973 ARFGEF3Q5TH69 2177 aa12.92□□□□□ -0.34
NR1H3-235ENST00000616973 RP1L1Q8IWN7 2480 aaPredicted RBP12.92□□□□□ -0.34
NR1H3-235ENST00000616973 B9A039 149 aa12.92□□□□□ -0.34
NR1H3-235ENST00000616973 SRP19P09132 144 aaKnown RBP12.92□□□□□ -0.34
NR1H3-235ENST00000616973 PAX6P26367 422 aa12.92□□□□□ -0.34
NR1H3-235ENST00000616973 RPL31P62899 125 aaKnown RBP12.92□□□□□ -0.34
NR1H3-235ENST00000616973 ICAM4Q14773 271 aa12.92□□□□□ -0.34
NR1H3-235ENST00000616973 HEPN1Q6WQI6 88 aa12.92□□□□□ -0.34
NR1H3-235ENST00000616973 SSX9Q7RTT3 188 aa12.92□□□□□ -0.34
NR1H3-235ENST00000616973 RCC1LQ96I51 464 aaKnown RBP12.92□□□□□ -0.34
NR1H3-235ENST00000616973 CLCC1Q96S66 551 aa12.92□□□□□ -0.34
NR1H3-235ENST00000616973 KAAG1Q9UBP8 84 aa12.92□□□□□ -0.34
NR1H3-235ENST00000616973 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.91□□□□□ -0.34
NR1H3-235ENST00000616973 CHRNB4P30926 498 aa12.91□□□□□ -0.34
NR1H3-235ENST00000616973 VDAC2P45880 294 aaPredicted RBP12.91□□□□□ -0.34
NR1H3-235ENST00000616973 PMS2P11Q13670 270 aa12.91□□□□□ -0.34
NR1H3-235ENST00000616973 ZNF726P1Q15940 193 aa12.91□□□□□ -0.34
NR1H3-235ENST00000616973 HFEQ30201 348 aa12.91□□□□□ -0.34
NR1H3-235ENST00000616973 SOHLH1Q5JUK2 328 aa12.91□□□□□ -0.34
NR1H3-235ENST00000616973 OR10G4Q8NGN3 311 aa12.91□□□□□ -0.34
NR1H3-235ENST00000616973 CCL17Q92583 94 aa12.91□□□□□ -0.34
NR1H3-235ENST00000616973 NEUROG1Q92886 237 aa12.91□□□□□ -0.34
NR1H3-235ENST00000616973 SMCO4Q9NRQ5 59 aa12.91□□□□□ -0.34
NR1H3-235ENST00000616973 DMXL2Q8TDJ6 3036 aa12.91□□□□□ -0.34
NR1H3-235ENST00000616973 LOC102723971A0A1B0GUV8 181 aa12.9□□□□□ -0.34
NR1H3-235ENST00000616973 C15orf61A6NNL5 157 aa12.9□□□□□ -0.34
NR1H3-235ENST00000616973 NDUFB3O43676 98 aa12.9□□□□□ -0.34
NR1H3-235ENST00000616973 FCN3O75636 299 aa12.9□□□□□ -0.34
NR1H3-235ENST00000616973 MBP02144 154 aa12.9□□□□□ -0.34
NR1H3-235ENST00000616973 OR13C7P0DN81 318 aa12.9□□□□□ -0.34
NR1H3-235ENST00000616973 GNG10P50151 68 aa12.9□□□□□ -0.34
NR1H3-235ENST00000616973 HAGHQ16775 308 aa12.9□□□□□ -0.34
NR1H3-235ENST00000616973 AWAT1Q58HT5 328 aa12.9□□□□□ -0.34
NR1H3-235ENST00000616973 SPINK9Q5DT21 86 aa12.9□□□□□ -0.34
NR1H3-235ENST00000616973 ZNF787Q6DD87 383 aa12.9□□□□□ -0.34
NR1H3-235ENST00000616973 VKORC1L1Q8N0U8 176 aa12.9□□□□□ -0.34
NR1H3-235ENST00000616973 ZCCHC14Q8WYQ9 949 aaKnown RBP12.9□□□□□ -0.34
NR1H3-235ENST00000616973 ZNF714Q96N38 554 aa12.9□□□□□ -0.34
NR1H3-235ENST00000616973 BSNQ9UPA5 3926 aa12.9□□□□□ -0.34
NR1H3-235ENST00000616973 NDUFA2O43678 99 aa12.9□□□□□ -0.35
NR1H3-235ENST00000616973 HRASP01112 189 aa12.9□□□□□ -0.35
NR1H3-235ENST00000616973 CTRB1P17538 263 aa12.9□□□□□ -0.35
NR1H3-235ENST00000616973 FGF7P21781 194 aa12.9□□□□□ -0.35
NR1H3-235ENST00000616973 RHEBQ15382 184 aa12.9□□□□□ -0.35
NR1H3-235ENST00000616973 LRRC10Q5BKY1 277 aa12.9□□□□□ -0.35
NR1H3-235ENST00000616973 CTRB2Q6GPI1 263 aa12.9□□□□□ -0.35
NR1H3-235ENST00000616973 RHOVQ96L33 236 aa12.9□□□□□ -0.35
NR1H3-235ENST00000616973 GGACTQ9BVM4 153 aa12.9□□□□□ -0.35
NR1H3-235ENST00000616973 FOXA2Q9Y261 457 aaPredicted RBP12.9□□□□□ -0.35
NR1H3-235ENST00000616973 SPTBN4Q9H254 2564 aa12.89□□□□□ -0.35
NR1H3-235ENST00000616973 C7orf77A4D0Y5 90 aa12.89□□□□□ -0.35
NR1H3-235ENST00000616973 CCL21O00585 134 aa12.89□□□□□ -0.35
NR1H3-235ENST00000616973 IL6RP08887 468 aaPredicted RBP12.89□□□□□ -0.35
NR1H3-235ENST00000616973 TMEM200BQ69YZ2 307 aa12.89□□□□□ -0.35
NR1H3-235ENST00000616973 OR4A47Q6IF82 309 aa12.89□□□□□ -0.35
NR1H3-235ENST00000616973 ZNF833PQ6ZTB9 187 aa12.89□□□□□ -0.35
NR1H3-235ENST00000616973 AIFM2Q9BRQ8 373 aa12.89□□□□□ -0.35
NR1H3-235ENST00000616973 TUBA4BQ9H853 241 aa12.89□□□□□ -0.35
NR1H3-235ENST00000616973 TMEM14BQ9NUH8 114 aa12.89□□□□□ -0.35
NR1H3-235ENST00000616973 TCF19Q9Y242 345 aa12.89□□□□□ -0.35
NR1H3-235ENST00000616973 TRAV3A0A0B4J244 114 aa12.88□□□□□ -0.35
NR1H3-235ENST00000616973 H7C2Y5 167 aa12.88□□□□□ -0.35
NR1H3-235ENST00000616973 CT45A6P0DMU7 189 aa12.88□□□□□ -0.35
NR1H3-235ENST00000616973 CT45A5P0DMU8 189 aa12.88□□□□□ -0.35
NR1H3-235ENST00000616973 CT45A7P0DMV0 189 aa12.88□□□□□ -0.35
NR1H3-235ENST00000616973 SSX7Q7RTT5 188 aa12.88□□□□□ -0.35
NR1H3-235ENST00000616973 C8orf31Q8N9H6 132 aa12.88□□□□□ -0.35
NR1H3-235ENST00000616973 ZNF596Q8TC21 504 aa12.88□□□□□ -0.35
NR1H3-235ENST00000616973 RAB39BQ96DA2 213 aa12.88□□□□□ -0.35
NR1H3-235ENST00000616973 NPCDR1Q9BY65 106 aa12.88□□□□□ -0.35
NR1H3-235ENST00000616973 RPS10P5Q9NQ39 176 aa12.88□□□□□ -0.35
NR1H3-235ENST00000616973 HEYLQ9NQ87 328 aaPredicted RBP12.88□□□□□ -0.35
NR1H3-235ENST00000616973 CISD1Q9NZ45 108 aaKnown RBP12.88□□□□□ -0.35
NR1H3-235ENST00000616973 ATMQ13315 3056 aa12.88□□□□□ -0.35
NR1H3-235ENST00000616973 POLEQ07864 2286 aa12.88□□□□□ -0.35
NR1H3-235ENST00000616973 C17orf112F2Z3M2 114 aa12.88□□□□□ -0.35
NR1H3-235ENST00000616973 SOX15O60248 233 aa12.88□□□□□ -0.35
NR1H3-235ENST00000616973 ELLP55199 621 aaPredicted RBP12.88□□□□□ -0.35
NR1H3-235ENST00000616973 HSPE1P61604 102 aaKnown RBP12.88□□□□□ -0.35
NR1H3-235ENST00000616973 RTL8BQ17RB0 113 aa12.88□□□□□ -0.35
NR1H3-235ENST00000616973 ACSM6Q6P461 480 aa12.88□□□□□ -0.35
NR1H3-235ENST00000616973 LCN15Q6UWW0 184 aa12.88□□□□□ -0.35
NR1H3-235ENST00000616973 LYPD2Q6UXB3 125 aa12.88□□□□□ -0.35
NR1H3-235ENST00000616973 RPP25LQ8N5L8 163 aaKnown RBP12.88□□□□□ -0.35
NR1H3-235ENST00000616973 C15orf54Q8N8G6 183 aa12.88□□□□□ -0.35
NR1H3-235ENST00000616973 LINC01560Q8TB33 94 aa12.88□□□□□ -0.35
NR1H3-235ENST00000616973 WDR83OSQ9Y284 106 aa12.88□□□□□ -0.35
NR1H3-235ENST00000616973 IGHV1-69-2A0A0G2JMI3 117 aa12.87□□□□□ -0.35
NR1H3-235ENST00000616973 MAP1LC3B2A6NCE7 125 aa12.87□□□□□ -0.35
NR1H3-235ENST00000616973 FAM90A27PA6NNH2 459 aa12.87□□□□□ -0.35
NR1H3-235ENST00000616973 PRSS46E5RG02 174 aa12.87□□□□□ -0.35
NR1H3-235ENST00000616973 M0R036 132 aa12.87□□□□□ -0.35
NR1H3-235ENST00000616973 FSTL3O95633 263 aa12.87□□□□□ -0.35
NR1H3-235ENST00000616973 IFNA10P01566 189 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 784.9 ms