RNA–Protein interactions for RNA: ENST00000615061.4

CBWD3-211, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,771 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-211ENST00000615061 KIAA0141Q14154 515 aaPredicted RBP13.04□□□□□ -0.32
CBWD3-211ENST00000615061 OXLD1Q5BKU9 147 aa13.04□□□□□ -0.32
CBWD3-211ENST00000615061 ZNF66Q6ZN08 573 aa13.04□□□□□ -0.32
CBWD3-211ENST00000615061 MOB3AQ96BX8 217 aa13.04□□□□□ -0.32
CBWD3-211ENST00000615061 FXYD6Q9H0Q3 95 aa13.04□□□□□ -0.32
CBWD3-211ENST00000615061 M0QYG6 137 aa13.04□□□□□ -0.32
CBWD3-211ENST00000615061 CNIH1O95406 144 aa13.04□□□□□ -0.32
CBWD3-211ENST00000615061 DEFA6Q01524 100 aa13.04□□□□□ -0.32
CBWD3-211ENST00000615061 VMA21Q3ZAQ7 101 aa13.04□□□□□ -0.32
CBWD3-211ENST00000615061 UNQ5815/PRO19632Q6UWF5 114 aa13.04□□□□□ -0.32
CBWD3-211ENST00000615061 RBM38Q9H0Z9 239 aaKnown RBP13.04□□□□□ -0.32
CBWD3-211ENST00000615061 APELAP0DMC3 54 aa13.03□□□□□ -0.32
CBWD3-211ENST00000615061 CDX1P47902 265 aaPredicted RBP13.03□□□□□ -0.32
CBWD3-211ENST00000615061 DGCR2P98153 550 aa13.03□□□□□ -0.32
CBWD3-211ENST00000615061 MSMO1Q15800 293 aa13.03□□□□□ -0.32
CBWD3-211ENST00000615061 ACTBL2Q562R1 376 aa13.03□□□□□ -0.32
CBWD3-211ENST00000615061 TEX45Q8NA69 505 aa13.03□□□□□ -0.32
CBWD3-211ENST00000615061 ZBTB34Q8NCN2 500 aa13.03□□□□□ -0.32
CBWD3-211ENST00000615061 OR6F1Q8NGZ6 308 aa13.03□□□□□ -0.32
CBWD3-211ENST00000615061 OR51H1Q8NH63 302 aa13.03□□□□□ -0.32
CBWD3-211ENST00000615061 OR4S2Q8NH73 311 aa13.03□□□□□ -0.32
CBWD3-211ENST00000615061 MYOZ3Q8TDC0 251 aa13.03□□□□□ -0.32
CBWD3-211ENST00000615061 RAX2Q96IS3 184 aa13.03□□□□□ -0.32
CBWD3-211ENST00000615061 GNB4Q9HAV0 340 aa13.03□□□□□ -0.32
CBWD3-211ENST00000615061 FOXA2Q9Y261 457 aaPredicted RBP13.03□□□□□ -0.32
CBWD3-211ENST00000615061 CD33P20138 364 aa13.02□□□□□ -0.32
CBWD3-211ENST00000615061 RAB9AP51151 201 aa13.02□□□□□ -0.32
CBWD3-211ENST00000615061 TSPAN5P62079 268 aa13.02□□□□□ -0.32
CBWD3-211ENST00000615061 TMEM267Q0VDI3 215 aaPredicted RBP13.02□□□□□ -0.32
CBWD3-211ENST00000615061 PRSS8Q16651 343 aa13.02□□□□□ -0.32
CBWD3-211ENST00000615061 AKIRIN2Q53H80 203 aa13.02□□□□□ -0.32
CBWD3-211ENST00000615061 SAMD5Q5TGI4 173 aa13.02□□□□□ -0.32
CBWD3-211ENST00000615061 TMEM65Q6PI78 240 aa13.02□□□□□ -0.32
CBWD3-211ENST00000615061 MRPL41Q8IXM3 137 aaKnown RBP13.02□□□□□ -0.32
CBWD3-211ENST00000615061 SPAG16Q8N0X2 631 aa13.02□□□□□ -0.32
CBWD3-211ENST00000615061 LINC00482Q8N8I6 264 aa13.02□□□□□ -0.32
CBWD3-211ENST00000615061 WFDC9Q8NEX5 89 aa13.02□□□□□ -0.32
CBWD3-211ENST00000615061 DIRAS2Q96HU8 199 aa13.02□□□□□ -0.32
CBWD3-211ENST00000615061 OR5B12Q96R08 314 aa13.02□□□□□ -0.32
CBWD3-211ENST00000615061 TINAGL1Q9GZM7 467 aaPredicted RBP13.02□□□□□ -0.32
CBWD3-211ENST00000615061 ZNF430Q9H8G1 570 aaPredicted RBP13.02□□□□□ -0.32
CBWD3-211ENST00000615061 MTFP1Q9UDX5 166 aa13.02□□□□□ -0.32
CBWD3-211ENST00000615061 CD3DP04234 171 aa13.02□□□□□ -0.33
CBWD3-211ENST00000615061 TNXAQ16473 311 aa13.02□□□□□ -0.33
CBWD3-211ENST00000615061 ASPHD1Q5U4P2 390 aa13.02□□□□□ -0.33
CBWD3-211ENST00000615061 SSX9Q7RTT3 188 aa13.02□□□□□ -0.33
CBWD3-211ENST00000615061 ZNF491Q8N8L2 437 aa13.02□□□□□ -0.33
CBWD3-211ENST00000615061 MS4A10Q96PG2 267 aa13.02□□□□□ -0.33
CBWD3-211ENST00000615061 RLN1P04808 185 aa13.01□□□□□ -0.33
CBWD3-211ENST00000615061 IGLL1P15814 213 aa13.01□□□□□ -0.33
CBWD3-211ENST00000615061 C10orf55Q5SWW7 151 aa13.01□□□□□ -0.33
CBWD3-211ENST00000615061 AADACL3Q5VUY0 350 aa13.01□□□□□ -0.33
CBWD3-211ENST00000615061 OR5T1Q8NG75 326 aa13.01□□□□□ -0.33
CBWD3-211ENST00000615061 OR4D10Q8NGI6 311 aa13.01□□□□□ -0.33
CBWD3-211ENST00000615061 MCFD2Q8NI22 146 aa13.01□□□□□ -0.33
CBWD3-211ENST00000615061 FCAMRQ8WWV6 532 aa13.01□□□□□ -0.33
CBWD3-211ENST00000615061 P2RX4Q99571 388 aa13.01□□□□□ -0.33
CBWD3-211ENST00000615061 CCL24O00175 119 aa13□□□□□ -0.33
CBWD3-211ENST00000615061 TPPPO94811 219 aa13□□□□□ -0.33
CBWD3-211ENST00000615061 CATR1Q13166 79 aa13□□□□□ -0.33
CBWD3-211ENST00000615061 IL18Q14116 193 aa13□□□□□ -0.33
CBWD3-211ENST00000615061 VAX1Q5SQQ9 334 aa13□□□□□ -0.33
CBWD3-211ENST00000615061 TCTEX1D1Q8N7M0 179 aa13□□□□□ -0.33
CBWD3-211ENST00000615061 RHOVQ96L33 236 aa13□□□□□ -0.33
CBWD3-211ENST00000615061 NXF2Q9GZY0 626 aaKnown RBP13□□□□□ -0.33
CBWD3-211ENST00000615061 MSGN1A6NI15 193 aa12.99□□□□□ -0.33
CBWD3-211ENST00000615061 GABARAPH6UMI1 98 aa12.99□□□□□ -0.33
CBWD3-211ENST00000615061 PGLYRP1O75594 196 aaPredicted RBP12.99□□□□□ -0.33
CBWD3-211ENST00000615061 SLC6A1P30531 599 aa12.99□□□□□ -0.33
CBWD3-211ENST00000615061 PHLDA2Q53GA4 152 aa12.99□□□□□ -0.33
CBWD3-211ENST00000615061 C4orf3Q8WVX3 66 aa12.99□□□□□ -0.33
CBWD3-211ENST00000615061 SRSF12Q8WXF0 261 aaKnown RBP12.99□□□□□ -0.33
CBWD3-211ENST00000615061 UBE2E2Q96LR5 201 aa12.99□□□□□ -0.33
CBWD3-211ENST00000615061 ALX4Q9H161 411 aaPredicted RBP12.99□□□□□ -0.33
CBWD3-211ENST00000615061 RSL24D1Q9UHA3 163 aaKnown RBP12.99□□□□□ -0.33
CBWD3-211ENST00000615061 OR2A4O95047 310 aa12.99□□□□□ -0.33
CBWD3-211ENST00000615061 TNFSF8P32971 234 aa12.99□□□□□ -0.33
CBWD3-211ENST00000615061 MYCNOSP40205 109 aa12.99□□□□□ -0.33
CBWD3-211ENST00000615061 KIR2DS2P43631 304 aa12.99□□□□□ -0.33
CBWD3-211ENST00000615061 DEFA5Q01523 94 aa12.99□□□□□ -0.33
CBWD3-211ENST00000615061 BEAN1Q3B7T3 259 aa12.99□□□□□ -0.33
CBWD3-211ENST00000615061 RNASE10Q5GAN6 216 aaKnown RBP12.99□□□□□ -0.33
CBWD3-211ENST00000615061 PUSL1Q8N0Z8 303 aaKnown RBP12.99□□□□□ -0.33
CBWD3-211ENST00000615061 OR5M8Q8NGP6 311 aa12.99□□□□□ -0.33
CBWD3-211ENST00000615061 C15orf40Q8WUR7 153 aa12.99□□□□□ -0.33
CBWD3-211ENST00000615061 OR2A7Q96R45 310 aa12.99□□□□□ -0.33
CBWD3-211ENST00000615061 VSIG4Q9Y279 399 aa12.99□□□□□ -0.33
CBWD3-211ENST00000615061 I3L521 148 aa12.98□□□□□ -0.33
CBWD3-211ENST00000615061 GPR31O00270 319 aa12.98□□□□□ -0.33
CBWD3-211ENST00000615061 RBFOX2O43251 390 aaKnown RBP eCLIP12.98□□□□□ -0.33
CBWD3-211ENST00000615061 KBTBD11O94819 623 aa12.98□□□□□ -0.33
CBWD3-211ENST00000615061 S1PR2O95136 353 aa12.98□□□□□ -0.33
CBWD3-211ENST00000615061 PRB2P02812 416 aaPredicted RBP12.98□□□□□ -0.33
CBWD3-211ENST00000615061 MYOD1P15172 320 aa12.98□□□□□ -0.33
CBWD3-211ENST00000615061 RAB25P57735 213 aa12.98□□□□□ -0.33
CBWD3-211ENST00000615061 PYHIN1Q6K0P9 492 aa12.98□□□□□ -0.33
CBWD3-211ENST00000615061 FAAP20Q6NZ36 180 aa12.98□□□□□ -0.33
CBWD3-211ENST00000615061 OR11H1Q8NG94 326 aa12.98□□□□□ -0.33
CBWD3-211ENST00000615061 SMIM4Q8WVI0 70 aa12.98□□□□□ -0.33
CBWD3-211ENST00000615061 PHB2Q99623 299 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms