RNA–Protein interactions for RNA: ENST00000613758.4

TMEM254-213, Transcript of transmembrane protein 254, humanhuman

TSL 1 (best) BASIC

Gene TMEM254, Length 2,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-213ENST00000613758 NPFFO15130 113 aa11.13□□□□□ -0.63
TMEM254-213ENST00000613758 RBFOX2O43251 390 aaKnown RBP eCLIP11.13□□□□□ -0.63
TMEM254-213ENST00000613758 SCGB1D2O95969 90 aa11.13□□□□□ -0.63
TMEM254-213ENST00000613758 IGHV1-69P01742 117 aa11.13□□□□□ -0.63
TMEM254-213ENST00000613758 TAGLNQ01995 201 aaKnown RBP11.13□□□□□ -0.63
TMEM254-213ENST00000613758 MIDNQ504T8 468 aa11.13□□□□□ -0.63
TMEM254-213ENST00000613758 GPR146Q96CH1 333 aa11.13□□□□□ -0.63
TMEM254-213ENST00000613758 SLC35D1Q9NTN3 355 aa11.13□□□□□ -0.63
TMEM254-213ENST00000613758 LSM5Q9Y4Y9 91 aaKnown RBP11.13□□□□□ -0.63
TMEM254-213ENST00000613758 VPS13CQ709C8 3753 aa11.13□□□□□ -0.63
TMEM254-213ENST00000613758 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.12□□□□□ -0.63
TMEM254-213ENST00000613758 TRAV40A0A0B4J280 105 aa11.12□□□□□ -0.63
TMEM254-213ENST00000613758 IGHV1-3A0A0C4DH29 117 aa11.12□□□□□ -0.63
TMEM254-213ENST00000613758 H0YJW9 148 aa11.12□□□□□ -0.63
TMEM254-213ENST00000613758 TXNL1O43396 289 aa11.12□□□□□ -0.63
TMEM254-213ENST00000613758 S1PR2O95136 353 aa11.12□□□□□ -0.63
TMEM254-213ENST00000613758 IGKV1-5P01602 117 aa11.12□□□□□ -0.63
TMEM254-213ENST00000613758 APOA2P02652 100 aa11.12□□□□□ -0.63
TMEM254-213ENST00000613758 PET100P0DJ07 73 aa11.12□□□□□ -0.63
TMEM254-213ENST00000613758 SAA4P35542 130 aa11.12□□□□□ -0.63
TMEM254-213ENST00000613758 EXOSC2Q13868 293 aaKnown RBP11.12□□□□□ -0.63
TMEM254-213ENST00000613758 GPR157Q5UAW9 335 aa11.12□□□□□ -0.63
TMEM254-213ENST00000613758 MOB3BQ86TA1 216 aa11.12□□□□□ -0.63
TMEM254-213ENST00000613758 INO80EQ8NBZ0 244 aaPredicted RBP11.12□□□□□ -0.63
TMEM254-213ENST00000613758 C17orf50Q8WW18 174 aa11.12□□□□□ -0.63
TMEM254-213ENST00000613758 AQP10Q96PS8 301 aa11.12□□□□□ -0.63
TMEM254-213ENST00000613758 C11orf1Q9H5F2 150 aa11.12□□□□□ -0.63
TMEM254-213ENST00000613758 BCL2L11O43521 198 aa11.11□□□□□ -0.63
TMEM254-213ENST00000613758 HPRT1P00492 218 aa11.11□□□□□ -0.63
TMEM254-213ENST00000613758 RRASP10301 218 aa11.11□□□□□ -0.63
TMEM254-213ENST00000613758 SSX2Q16385 188 aa11.11□□□□□ -0.63
TMEM254-213ENST00000613758 RTL8BQ17RB0 113 aa11.11□□□□□ -0.63
TMEM254-213ENST00000613758 Q6ZRM9 215 aa11.11□□□□□ -0.63
TMEM254-213ENST00000613758 PIP4P2Q8N4L2 257 aa11.11□□□□□ -0.63
TMEM254-213ENST00000613758 DMBX1Q8NFW5 382 aa11.11□□□□□ -0.63
TMEM254-213ENST00000613758 OR4S2Q8NH73 311 aa11.11□□□□□ -0.63
TMEM254-213ENST00000613758 LSM10Q969L4 123 aaKnown RBP11.11□□□□□ -0.63
TMEM254-213ENST00000613758 RBMXL1Q96E39 390 aaKnown RBP11.11□□□□□ -0.63
TMEM254-213ENST00000613758 SPIN2AQ99865 258 aa11.11□□□□□ -0.63
TMEM254-213ENST00000613758 SPIN2BQ9BPZ2 258 aa11.11□□□□□ -0.63
TMEM254-213ENST00000613758 PIGBOS1A0A0B4J2F0 54 aa11.11□□□□□ -0.63
TMEM254-213ENST00000613758 H7C2Y5 167 aa11.11□□□□□ -0.63
TMEM254-213ENST00000613758 ATP6V1G1O75348 118 aa11.11□□□□□ -0.63
TMEM254-213ENST00000613758 PITX3O75364 302 aa11.11□□□□□ -0.63
TMEM254-213ENST00000613758 CRYZL1O95825 349 aa11.11□□□□□ -0.63
TMEM254-213ENST00000613758 IGHV4-38-2P0DP08 117 aa11.11□□□□□ -0.63
TMEM254-213ENST00000613758 HKR1P10072 659 aa11.11□□□□□ -0.63
TMEM254-213ENST00000613758 MC5RP33032 325 aa11.11□□□□□ -0.63
TMEM254-213ENST00000613758 RUSC1-AS1Q66K80 236 aa11.11□□□□□ -0.63
TMEM254-213ENST00000613758 SLC51BQ86UW2 128 aa11.11□□□□□ -0.63
TMEM254-213ENST00000613758 MALSU1Q96EH3 234 aa11.11□□□□□ -0.63
TMEM254-213ENST00000613758 AJUBAQ96IF1 538 aa11.11□□□□□ -0.63
TMEM254-213ENST00000613758 PLEKHA2Q9HB19 425 aa11.11□□□□□ -0.63
TMEM254-213ENST00000613758 RCL1Q9Y2P8 373 aaKnown RBP11.11□□□□□ -0.63
TMEM254-213ENST00000613758 POMT1Q9Y6A1 747 aa11.11□□□□□ -0.63
TMEM254-213ENST00000613758 IGHV3-72A0A0B4J1Y9 119 aa11.1□□□□□ -0.63
TMEM254-213ENST00000613758 A0A1W2PPI3 338 aa11.1□□□□□ -0.63
TMEM254-213ENST00000613758 OOSP1A8MZH6 123 aa11.1□□□□□ -0.63
TMEM254-213ENST00000613758 ST8SIA3O43173 380 aa11.1□□□□□ -0.63
TMEM254-213ENST00000613758 SLC25A6P12236 298 aa11.1□□□□□ -0.63
TMEM254-213ENST00000613758 PAX6P26367 422 aa11.1□□□□□ -0.63
TMEM254-213ENST00000613758 IZUMO4Q1ZYL8 232 aa11.1□□□□□ -0.63
TMEM254-213ENST00000613758 CXorf66Q5JRM2 361 aaPredicted RBP11.1□□□□□ -0.63
TMEM254-213ENST00000613758 KLF17Q5JT82 389 aaPredicted RBP11.1□□□□□ -0.63
TMEM254-213ENST00000613758 SLC7A5P1Q8MH63 180 aa11.1□□□□□ -0.63
TMEM254-213ENST00000613758 OR8H3Q8N146 312 aa11.1□□□□□ -0.63
TMEM254-213ENST00000613758 DYNAPQ8N1N2 210 aa11.1□□□□□ -0.63
TMEM254-213ENST00000613758 WASHC3Q9Y3C0 194 aa11.1□□□□□ -0.63
TMEM254-213ENST00000613758 CSMD1Q96PZ7 3565 aa11.1□□□□□ -0.63
TMEM254-213ENST00000613758 ATG12O94817 140 aa11.1□□□□□ -0.63
TMEM254-213ENST00000613758 KRASP01116 189 aa11.1□□□□□ -0.63
TMEM254-213ENST00000613758 RLN2P04090 185 aa11.1□□□□□ -0.63
TMEM254-213ENST00000613758 IGKV1-16P04430 117 aa11.1□□□□□ -0.63
TMEM254-213ENST00000613758 G6PCP35575 357 aa11.1□□□□□ -0.63
TMEM254-213ENST00000613758 HTR2BP41595 481 aa11.1□□□□□ -0.63
TMEM254-213ENST00000613758 ID3Q02535 119 aa11.1□□□□□ -0.63
TMEM254-213ENST00000613758 SMCO1Q147U7 214 aa11.1□□□□□ -0.63
TMEM254-213ENST00000613758 DHRS7BQ6IAN0 325 aaPredicted RBP11.1□□□□□ -0.63
TMEM254-213ENST00000613758 CCDC144NLQ6NUI1 221 aa11.1□□□□□ -0.63
TMEM254-213ENST00000613758 BRD3OSQ6XYD6 125 aa11.1□□□□□ -0.63
TMEM254-213ENST00000613758 PDPNQ86YL7 162 aa11.1□□□□□ -0.63
TMEM254-213ENST00000613758 A0A1B0GU03 582 aa11.09□□□□□ -0.63
TMEM254-213ENST00000613758 KANTRA0A1W2PQU2 76 aa11.09□□□□□ -0.63
TMEM254-213ENST00000613758 TIMM23O14925 209 aa11.09□□□□□ -0.63
TMEM254-213ENST00000613758 NKX2-1P43699 371 aaPredicted RBP11.09□□□□□ -0.63
TMEM254-213ENST00000613758 RAB13P51153 203 aa11.09□□□□□ -0.63
TMEM254-213ENST00000613758 AKR1C2P52895 323 aa11.09□□□□□ -0.63
TMEM254-213ENST00000613758 RNASE11Q8TAA1 199 aaKnown RBP11.09□□□□□ -0.63
TMEM254-213ENST00000613758 FLYWCH2Q96CP2 140 aaKnown RBP11.09□□□□□ -0.63
TMEM254-213ENST00000613758 R3HDM4Q96D70 268 aa11.09□□□□□ -0.63
TMEM254-213ENST00000613758 CYTL1Q9NRR1 136 aa11.09□□□□□ -0.63
TMEM254-213ENST00000613758 ZFP57Q9NU63 452 aa11.09□□□□□ -0.63
TMEM254-213ENST00000613758 CREBBPQ92793 2442 aa11.09□□□□□ -0.63
TMEM254-213ENST00000613758 NOTCH2Q04721 2471 aa11.09□□□□□ -0.63
TMEM254-213ENST00000613758 ITPR3Q14573 2671 aa11.09□□□□□ -0.63
TMEM254-213ENST00000613758 E5RGE8 158 aa11.09□□□□□ -0.63
TMEM254-213ENST00000613758 IFNA7P01567 189 aa11.09□□□□□ -0.63
TMEM254-213ENST00000613758 P0C879 139 aa11.09□□□□□ -0.63
TMEM254-213ENST00000613758 POLR2GP62487 172 aaKnown RBP eCLIP11.09□□□□□ -0.63
TMEM254-213ENST00000613758 THOC7Q6I9Y2 204 aaKnown RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms