RNA–Protein interactions for RNA: ENST00000611963.4

TARDBP-213, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-213ENST00000611963 H0YJW9 148 aa6.55□□□□□ -1.36
TARDBP-213ENST00000611963 K7EPK0 472 aa6.55□□□□□ -1.36
TARDBP-213ENST00000611963 ARPC5O15511 151 aa6.55□□□□□ -1.36
TARDBP-213ENST00000611963 RBFOX2O43251 390 aaKnown RBP eCLIP6.55□□□□□ -1.36
TARDBP-213ENST00000611963 TOX4O94842 621 aa6.55□□□□□ -1.36
TARDBP-213ENST00000611963 KRASP01116 189 aa6.55□□□□□ -1.36
TARDBP-213ENST00000611963 APOA2P02652 100 aa6.55□□□□□ -1.36
TARDBP-213ENST00000611963 MBPP02686 304 aaPredicted RBP6.55□□□□□ -1.36
TARDBP-213ENST00000611963 P0C879 139 aa6.55□□□□□ -1.36
TARDBP-213ENST00000611963 SLC25A16P16260 332 aa6.55□□□□□ -1.36
TARDBP-213ENST00000611963 CXCL2P19875 107 aa6.55□□□□□ -1.36
TARDBP-213ENST00000611963 USF1P22415 310 aaPredicted RBP6.55□□□□□ -1.36
TARDBP-213ENST00000611963 PAX6P26367 422 aa6.55□□□□□ -1.36
TARDBP-213ENST00000611963 ZNF137PP52743 207 aa6.55□□□□□ -1.36
TARDBP-213ENST00000611963 FGL1Q08830 312 aa6.55□□□□□ -1.36
TARDBP-213ENST00000611963 SMCO1Q147U7 214 aa6.55□□□□□ -1.36
TARDBP-213ENST00000611963 LGALSLQ3ZCW2 172 aaPredicted RBP6.55□□□□□ -1.36
TARDBP-213ENST00000611963 CXorf66Q5JRM2 361 aaPredicted RBP6.55□□□□□ -1.36
TARDBP-213ENST00000611963 LDLRAD2Q5SZI1 272 aa6.55□□□□□ -1.36
TARDBP-213ENST00000611963 C11orf87Q6NUJ2 197 aa6.55□□□□□ -1.36
TARDBP-213ENST00000611963 FAM71F2Q6NXP2 309 aa6.55□□□□□ -1.36
TARDBP-213ENST00000611963 Q71RC1 249 aaPredicted RBP6.55□□□□□ -1.36
TARDBP-213ENST00000611963 TGIF2LXQ8IUE1 241 aa6.55□□□□□ -1.36
TARDBP-213ENST00000611963 VKORC1L1Q8N0U8 176 aa6.55□□□□□ -1.36
TARDBP-213ENST00000611963 FAM71E2Q8N5Q1 922 aa6.55□□□□□ -1.36
TARDBP-213ENST00000611963 MAPK1IP1LQ8NDC0 245 aa6.55□□□□□ -1.36
TARDBP-213ENST00000611963 OR1S1Q8NH92 325 aa6.55□□□□□ -1.36
TARDBP-213ENST00000611963 CD300LFQ8TDQ1 290 aa6.55□□□□□ -1.36
TARDBP-213ENST00000611963 DCUN1D4Q92564 292 aa6.55□□□□□ -1.36
TARDBP-213ENST00000611963 TNFRSF14Q92956 283 aa6.55□□□□□ -1.36
TARDBP-213ENST00000611963 LSM10Q969L4 123 aaKnown RBP6.55□□□□□ -1.36
TARDBP-213ENST00000611963 TMEM186Q96B77 213 aa6.55□□□□□ -1.36
TARDBP-213ENST00000611963 TBX15Q96SF7 602 aa6.55□□□□□ -1.36
TARDBP-213ENST00000611963 RNF126Q9BV68 326 aa6.55□□□□□ -1.36
TARDBP-213ENST00000611963 HEXA-AS1Q9H8Q6 139 aa6.55□□□□□ -1.36
TARDBP-213ENST00000611963 FAM212BQ9NTI7 297 aaPredicted RBP6.55□□□□□ -1.36
TARDBP-213ENST00000611963 RCL1Q9Y2P8 373 aaKnown RBP6.55□□□□□ -1.36
TARDBP-213ENST00000611963 POLR3KQ9Y2Y1 108 aaPredicted RBP6.55□□□□□ -1.36
TARDBP-213ENST00000611963 AMMECR1Q9Y4X0 333 aaPredicted RBP6.55□□□□□ -1.36
TARDBP-213ENST00000611963 INSIG2Q9Y5U4 225 aa6.55□□□□□ -1.36
TARDBP-213ENST00000611963 A0A1B0GU03 582 aa6.54□□□□□ -1.36
TARDBP-213ENST00000611963 BUB1B-PAK6H3BSN5 160 aa6.54□□□□□ -1.36
TARDBP-213ENST00000611963 H7C2Y5 167 aa6.54□□□□□ -1.36
TARDBP-213ENST00000611963 PITX3O75364 302 aa6.54□□□□□ -1.36
TARDBP-213ENST00000611963 LY6G6DO95868 133 aa6.54□□□□□ -1.36
TARDBP-213ENST00000611963 HPRT1P00492 218 aa6.54□□□□□ -1.36
TARDBP-213ENST00000611963 IGKV1-16P04430 117 aa6.54□□□□□ -1.36
TARDBP-213ENST00000611963 OR9G9P0C7N8 305 aa6.54□□□□□ -1.36
TARDBP-213ENST00000611963 SLC25A4P12235 298 aa6.54□□□□□ -1.36
TARDBP-213ENST00000611963 ERVK-16P61578 105 aa6.54□□□□□ -1.36
TARDBP-213ENST00000611963 POLR2GP62487 172 aaKnown RBP eCLIP6.54□□□□□ -1.36
TARDBP-213ENST00000611963 RTL8BQ17RB0 113 aa6.54□□□□□ -1.36
TARDBP-213ENST00000611963 PRSS54Q6PEW0 395 aa6.54□□□□□ -1.36
TARDBP-213ENST00000611963 C1orf122Q6ZSJ8 110 aa6.54□□□□□ -1.36
TARDBP-213ENST00000611963 H2BFWTQ7Z2G1 175 aa6.54□□□□□ -1.36
TARDBP-213ENST00000611963 LHFPL4Q7Z7J7 247 aa6.54□□□□□ -1.36
TARDBP-213ENST00000611963 ZNF546Q86UE3 836 aa6.54□□□□□ -1.36
TARDBP-213ENST00000611963 DMBX1Q8NFW5 382 aa6.54□□□□□ -1.36
TARDBP-213ENST00000611963 OR11H6Q8NGC7 330 aa6.54□□□□□ -1.36
TARDBP-213ENST00000611963 THAP6Q8TBB0 222 aa6.54□□□□□ -1.36
TARDBP-213ENST00000611963 LHX4Q969G2 390 aa6.54□□□□□ -1.36
TARDBP-213ENST00000611963 RPEQ96AT9 228 aa6.54□□□□□ -1.36
TARDBP-213ENST00000611963 MAGT1Q9H0U3 335 aa6.54□□□□□ -1.36
TARDBP-213ENST00000611963 UNKLQ9H9P5 680 aaKnown RBP6.54□□□□□ -1.36
TARDBP-213ENST00000611963 PLEKHA2Q9HB19 425 aa6.54□□□□□ -1.36
TARDBP-213ENST00000611963 NSG2Q9Y328 171 aa6.54□□□□□ -1.36
TARDBP-213ENST00000611963 MMP24Q9Y5R2 645 aa6.54□□□□□ -1.36
TARDBP-213ENST00000611963 POMT1Q9Y6A1 747 aa6.54□□□□□ -1.36
TARDBP-213ENST00000611963 FN1P02751 2386 aaKnown RBP6.53□□□□□ -1.36
TARDBP-213ENST00000611963 SVEP1Q4LDE5 3571 aa6.53□□□□□ -1.36
TARDBP-213ENST00000611963 TRAV3A0A0B4J244 114 aa6.53□□□□□ -1.36
TARDBP-213ENST00000611963 PIGBOS1A0A0B4J2F0 54 aa6.53□□□□□ -1.36
TARDBP-213ENST00000611963 IGHV1-3A0A0C4DH29 117 aa6.53□□□□□ -1.36
TARDBP-213ENST00000611963 MSGN1A6NI15 193 aa6.53□□□□□ -1.36
TARDBP-213ENST00000611963 MARCH11A6NNE9 402 aa6.53□□□□□ -1.36
TARDBP-213ENST00000611963 HMSDA8MTL9 139 aa6.53□□□□□ -1.36
TARDBP-213ENST00000611963 LY6LH3BQJ8 138 aa6.53□□□□□ -1.36
TARDBP-213ENST00000611963 L7N2F9 121 aa6.53□□□□□ -1.36
TARDBP-213ENST00000611963 SMAD7O15105 426 aaKnown RBP6.53□□□□□ -1.36
TARDBP-213ENST00000611963 ST8SIA3O43173 380 aa6.53□□□□□ -1.36
TARDBP-213ENST00000611963 SSSCA1O60232 199 aa6.53□□□□□ -1.36
TARDBP-213ENST00000611963 TSC22D2O75157 780 aa6.53□□□□□ -1.36
TARDBP-213ENST00000611963 DEDDO75618 318 aa6.53□□□□□ -1.36
TARDBP-213ENST00000611963 ATG12O94817 140 aa6.53□□□□□ -1.36
TARDBP-213ENST00000611963 GHRHP01286 108 aa6.53□□□□□ -1.36
TARDBP-213ENST00000611963 SLC25A6P12236 298 aa6.53□□□□□ -1.36
TARDBP-213ENST00000611963 NQO2P16083 231 aa6.53□□□□□ -1.36
TARDBP-213ENST00000611963 HTR1DP28221 377 aa6.53□□□□□ -1.36
TARDBP-213ENST00000611963 NKX2-1P43699 371 aaPredicted RBP6.53□□□□□ -1.36
TARDBP-213ENST00000611963 AP2S1P53680 142 aaPredicted RBP6.53□□□□□ -1.36
TARDBP-213ENST00000611963 OR2B8PP59922 312 aa6.53□□□□□ -1.36
TARDBP-213ENST00000611963 PAX8Q06710 450 aa6.53□□□□□ -1.36
TARDBP-213ENST00000611963 KRTAP1-1Q07627 177 aa6.53□□□□□ -1.36
TARDBP-213ENST00000611963 KRTAP21-3Q3LHN1 58 aa6.53□□□□□ -1.36
TARDBP-213ENST00000611963 MIDNQ504T8 468 aa6.53□□□□□ -1.36
TARDBP-213ENST00000611963 TPTE2P1Q5T6R2 138 aa6.53□□□□□ -1.36
TARDBP-213ENST00000611963 TMEM65Q6PI78 240 aa6.53□□□□□ -1.36
TARDBP-213ENST00000611963 CLEC9AQ6UXN8 241 aa6.53□□□□□ -1.36
TARDBP-213ENST00000611963 MOB3BQ86TA1 216 aa6.53□□□□□ -1.36
TARDBP-213ENST00000611963 OR5AN1Q8NGI8 311 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms