RNA–Protein interactions for RNA: ENST00000611426.4

CBWD3-207, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,381 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-207ENST00000611426 RAB9BQ9NP90 201 aa17.23■□□□□ 0.35
CBWD3-207ENST00000611426 A0A1W2PPI3 338 aa17.22■□□□□ 0.35
CBWD3-207ENST00000611426 PSMB11A5LHX3 300 aa17.22■□□□□ 0.35
CBWD3-207ENST00000611426 HBZP02008 142 aa17.22■□□□□ 0.35
CBWD3-207ENST00000611426 TMEM11P17152 192 aa17.22■□□□□ 0.35
CBWD3-207ENST00000611426 PI3P19957 117 aa17.22■□□□□ 0.35
CBWD3-207ENST00000611426 GNRHRP30968 328 aa17.22■□□□□ 0.35
CBWD3-207ENST00000611426 TMEM30BQ3MIR4 351 aa17.22■□□□□ 0.35
CBWD3-207ENST00000611426 C5orf24Q7Z6I8 188 aa17.22■□□□□ 0.35
CBWD3-207ENST00000611426 OR8H3Q8N146 312 aa17.22■□□□□ 0.35
CBWD3-207ENST00000611426 CCDC71LQ8N9Z2 235 aa17.22■□□□□ 0.35
CBWD3-207ENST00000611426 SLC2A9Q9NRM0 540 aa17.22■□□□□ 0.35
CBWD3-207ENST00000611426 PIPOXQ9P0Z9 390 aa17.22■□□□□ 0.35
CBWD3-207ENST00000611426 IGKV1D-13A0A0B4J2D9 117 aa17.21■□□□□ 0.35
CBWD3-207ENST00000611426 A0A1W2PPE3 182 aa17.21■□□□□ 0.35
CBWD3-207ENST00000611426 SPINT2O43291 252 aa17.21■□□□□ 0.35
CBWD3-207ENST00000611426 IGKV1-13P0DP09 117 aa17.21■□□□□ 0.35
CBWD3-207ENST00000611426 VAMP1P23763 118 aa17.21■□□□□ 0.35
CBWD3-207ENST00000611426 FXYD4P59646 89 aa17.21■□□□□ 0.35
CBWD3-207ENST00000611426 RAP2BP61225 183 aa17.21■□□□□ 0.35
CBWD3-207ENST00000611426 HNF4GQ14541 408 aa17.21■□□□□ 0.35
CBWD3-207ENST00000611426 ZFP69Q49AA0 526 aa17.21■□□□□ 0.35
CBWD3-207ENST00000611426 SGPP2Q8IWX5 399 aa17.21■□□□□ 0.35
CBWD3-207ENST00000611426 OR1A1Q9P1Q5 309 aa17.21■□□□□ 0.35
CBWD3-207ENST00000611426 GPR31O00270 319 aa17.2■□□□□ 0.34
CBWD3-207ENST00000611426 EIF2B2P49770 351 aaKnown RBP17.2■□□□□ 0.34
CBWD3-207ENST00000611426 PIGPP57054 158 aa17.2■□□□□ 0.34
CBWD3-207ENST00000611426 KCTD9Q7L273 389 aa17.2■□□□□ 0.34
CBWD3-207ENST00000611426 C5orf56Q8N8D9 126 aa17.2■□□□□ 0.34
CBWD3-207ENST00000611426 OR5M8Q8NGP6 311 aa17.2■□□□□ 0.34
CBWD3-207ENST00000611426 OR1L1Q8NH94 360 aa17.2■□□□□ 0.34
CBWD3-207ENST00000611426 RTN4IP1Q8WWV3 396 aaPredicted RBP17.2■□□□□ 0.34
CBWD3-207ENST00000611426 ARL11Q969Q4 196 aa17.2■□□□□ 0.34
CBWD3-207ENST00000611426 NAA60Q9H7X0 242 aa17.2■□□□□ 0.34
CBWD3-207ENST00000611426 RDH8Q9NYR8 311 aa17.2■□□□□ 0.34
CBWD3-207ENST00000611426 SLC22A5O76082 557 aa17.19■□□□□ 0.34
CBWD3-207ENST00000611426 IGKV1D-33P01593 117 aa17.19■□□□□ 0.34
CBWD3-207ENST00000611426 IGKV1-33P01594 117 aa17.19■□□□□ 0.34
CBWD3-207ENST00000611426 LY6G6FQ5SQ64 297 aa17.19■□□□□ 0.34
CBWD3-207ENST00000611426 ZNF329Q86UD4 541 aa17.19■□□□□ 0.34
CBWD3-207ENST00000611426 LRTM2Q8N967 370 aa17.19■□□□□ 0.34
CBWD3-207ENST00000611426 BVESQ8NE79 360 aa17.19■□□□□ 0.34
CBWD3-207ENST00000611426 OR10V1Q8NGI7 309 aa17.19■□□□□ 0.34
CBWD3-207ENST00000611426 COQ8AQ8NI60 647 aa17.19■□□□□ 0.34
CBWD3-207ENST00000611426 IL1F10Q8WWZ1 152 aa17.19■□□□□ 0.34
CBWD3-207ENST00000611426 RCC1LQ96I51 464 aaKnown RBP17.19■□□□□ 0.34
CBWD3-207ENST00000611426 SLC5A7Q9GZV3 580 aa17.19■□□□□ 0.34
CBWD3-207ENST00000611426 ITGB1BP1O14713 200 aa17.18■□□□□ 0.34
CBWD3-207ENST00000611426 HSD17B6O14756 317 aa17.18■□□□□ 0.34
CBWD3-207ENST00000611426 FGF16O43320 207 aa17.18■□□□□ 0.34
CBWD3-207ENST00000611426 B3GALNT1O75752 331 aa17.18■□□□□ 0.34
CBWD3-207ENST00000611426 RGS11O94810 467 aa17.18■□□□□ 0.34
CBWD3-207ENST00000611426 GAPDHP04406 335 aaKnown RBP17.18■□□□□ 0.34
CBWD3-207ENST00000611426 LUMP51884 338 aaPredicted RBP17.18■□□□□ 0.34
CBWD3-207ENST00000611426 H2BFSP57053 126 aa17.18■□□□□ 0.34
CBWD3-207ENST00000611426 MOB3BQ86TA1 216 aa17.18■□□□□ 0.34
CBWD3-207ENST00000611426 NOXA1Q86UR1 476 aa17.18■□□□□ 0.34
CBWD3-207ENST00000611426 NOL4LQ96MY1 436 aaPredicted RBP17.18■□□□□ 0.34
CBWD3-207ENST00000611426 JPT1Q9UK76 154 aa17.18■□□□□ 0.34
CBWD3-207ENST00000611426 KCNIP3Q9Y2W7 256 aa17.18■□□□□ 0.34
CBWD3-207ENST00000611426 HSPA12AO43301 675 aa17.17■□□□□ 0.34
CBWD3-207ENST00000611426 REG1BP48304 166 aa17.17■□□□□ 0.34
CBWD3-207ENST00000611426 ZNF816Q0VGE8 651 aaPredicted RBP17.17■□□□□ 0.34
CBWD3-207ENST00000611426 ANKRD55Q3KP44 614 aa17.17■□□□□ 0.34
CBWD3-207ENST00000611426 OR52M1Q8NGK5 317 aa17.17■□□□□ 0.34
CBWD3-207ENST00000611426 UBALD1Q8TB05 177 aa17.17■□□□□ 0.34
CBWD3-207ENST00000611426 CASTOR1Q8WTX7 329 aa17.17■□□□□ 0.34
CBWD3-207ENST00000611426 IGHV1-3A0A0C4DH29 117 aa17.16■□□□□ 0.34
CBWD3-207ENST00000611426 TEX13DA0A0J9YY54 714 aaPredicted RBP17.16■□□□□ 0.34
CBWD3-207ENST00000611426 MPPED1O15442 326 aa17.16■□□□□ 0.34
CBWD3-207ENST00000611426 CEACAM6P40199 344 aa17.16■□□□□ 0.34
CBWD3-207ENST00000611426 ZNF818PQ6ZRF7 136 aa17.16■□□□□ 0.34
CBWD3-207ENST00000611426 CMTM1Q8IZ96 169 aa17.16■□□□□ 0.34
CBWD3-207ENST00000611426 ZBTB34Q8NCN2 500 aa17.16■□□□□ 0.34
CBWD3-207ENST00000611426 SECTM1Q8WVN6 248 aa17.16■□□□□ 0.34
CBWD3-207ENST00000611426 HYLS1Q96M11 299 aa17.16■□□□□ 0.34
CBWD3-207ENST00000611426 LINC00527Q9UJ94 153 aa17.16■□□□□ 0.34
CBWD3-207ENST00000611426 G3V3Q6 166 aa17.15■□□□□ 0.34
CBWD3-207ENST00000611426 GOSR2O14653 212 aa17.15■□□□□ 0.34
CBWD3-207ENST00000611426 YPEL1O60688 119 aa17.15■□□□□ 0.34
CBWD3-207ENST00000611426 S100GP29377 79 aa17.15■□□□□ 0.34
CBWD3-207ENST00000611426 SRPXP78539 464 aa17.15■□□□□ 0.34
CBWD3-207ENST00000611426 TMEM187Q14656 261 aa17.15■□□□□ 0.34
CBWD3-207ENST00000611426 LIN54Q6MZP7 749 aa17.15■□□□□ 0.34
CBWD3-207ENST00000611426 SLC35E3Q7Z769 313 aa17.15■□□□□ 0.34
CBWD3-207ENST00000611426 LINC00311Q8N616 119 aa17.15■□□□□ 0.34
CBWD3-207ENST00000611426 YPEL2Q96QA6 119 aa17.15■□□□□ 0.34
CBWD3-207ENST00000611426 GFOD1Q9NXC2 390 aa17.15■□□□□ 0.34
CBWD3-207ENST00000611426 IGHV3-43A0A0B4J1X8 118 aa17.15■□□□□ 0.34
CBWD3-207ENST00000611426 IGHV3-72A0A0B4J1Y9 119 aa17.15■□□□□ 0.34
CBWD3-207ENST00000611426 NCBP2LA6PVI3 153 aaKnown RBP17.15■□□□□ 0.34
CBWD3-207ENST00000611426 IGLV2-14P01704 120 aa17.15■□□□□ 0.34
CBWD3-207ENST00000611426 IGHG2P01859 326 aa17.15■□□□□ 0.34
CBWD3-207ENST00000611426 IGHV3-43DP0DP04 118 aa17.15■□□□□ 0.34
CBWD3-207ENST00000611426 IL3RAP26951 378 aa17.15■□□□□ 0.34
CBWD3-207ENST00000611426 SLC35B1P78383 322 aa17.15■□□□□ 0.34
CBWD3-207ENST00000611426 EBI3Q14213 229 aa17.15■□□□□ 0.34
CBWD3-207ENST00000611426 PHLDA2Q53GA4 152 aa17.15■□□□□ 0.34
CBWD3-207ENST00000611426 FOXRED2Q8IWF2 684 aa17.15■□□□□ 0.34
CBWD3-207ENST00000611426 PRR18Q8N4B5 295 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms