RNA–Protein interactions for RNA: ENST00000609104.5

USP6NL-205, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP6NL, Length 11,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-205ENST00000609104 AQP10Q96PS8 301 aa11.24□□□□□ -0.61
USP6NL-205ENST00000609104 DXOO77932 396 aaKnown RBP11.24□□□□□ -0.61
USP6NL-205ENST00000609104 WDR54Q9H977 334 aa11.24□□□□□ -0.61
USP6NL-205ENST00000609104 LIMS1P48059 325 aa11.23□□□□□ -0.61
USP6NL-205ENST00000609104 C18orf15Q96N68 181 aa11.23□□□□□ -0.61
USP6NL-205ENST00000609104 WNT10AQ9GZT5 417 aa11.23□□□□□ -0.61
USP6NL-205ENST00000609104 MRPL16Q9NX20 251 aaKnown RBP11.23□□□□□ -0.61
USP6NL-205ENST00000609104 LY6EQ16553 131 aa11.23□□□□□ -0.61
USP6NL-205ENST00000609104 C5orf66Q9H5L9 145 aa11.23□□□□□ -0.61
USP6NL-205ENST00000609104 CHODLQ9H9P2 273 aa11.23□□□□□ -0.61
USP6NL-205ENST00000609104 PCP4P48539 62 aa11.23□□□□□ -0.61
USP6NL-205ENST00000609104 C1QTNF12Q5T7M4 302 aa11.23□□□□□ -0.61
USP6NL-205ENST00000609104 GOLT1AQ6ZVE7 132 aa11.23□□□□□ -0.61
USP6NL-205ENST00000609104 S1PR2O95136 353 aa11.23□□□□□ -0.61
USP6NL-205ENST00000609104 HIST1H1AQ02539 215 aaPredicted RBP11.23□□□□□ -0.61
USP6NL-205ENST00000609104 AMELYQ99218 206 aa11.23□□□□□ -0.61
USP6NL-205ENST00000609104 IGHV1-45A0A0A0MS14 117 aa11.23□□□□□ -0.61
USP6NL-205ENST00000609104 SPAARA0A1B0GVQ0 90 aa11.23□□□□□ -0.61
USP6NL-205ENST00000609104 DUX5Q96PT3 197 aa11.23□□□□□ -0.61
USP6NL-205ENST00000609104 ATXN7O15265 892 aaPredicted RBP11.23□□□□□ -0.61
USP6NL-205ENST00000609104 DMRTA1Q5VZB9 504 aa11.23□□□□□ -0.61
USP6NL-205ENST00000609104 DLL3Q9NYJ7 618 aa11.23□□□□□ -0.61
USP6NL-205ENST00000609104 XIRP1Q702N8 1843 aaKnown RBP11.23□□□□□ -0.61
USP6NL-205ENST00000609104 C1orf174Q8IYL3 243 aa11.23□□□□□ -0.61
USP6NL-205ENST00000609104 ERVH48-1M5A8F1 160 aa11.23□□□□□ -0.61
USP6NL-205ENST00000609104 MOSPD3O75425 235 aa11.23□□□□□ -0.61
USP6NL-205ENST00000609104 C14orf144Q96I85 54 aa11.23□□□□□ -0.61
USP6NL-205ENST00000609104 DPRXA6NFQ7 191 aa11.22□□□□□ -0.61
USP6NL-205ENST00000609104 THY1P04216 161 aa11.22□□□□□ -0.61
USP6NL-205ENST00000609104 LINC00470Q9BZP3 86 aa11.22□□□□□ -0.61
USP6NL-205ENST00000609104 CACNG7P62955 275 aa11.22□□□□□ -0.61
USP6NL-205ENST00000609104 TGIF1Q15583 401 aa11.22□□□□□ -0.61
USP6NL-205ENST00000609104 C1QTNF9BB2RNN3 333 aa11.22□□□□□ -0.61
USP6NL-205ENST00000609104 EGR1P18146 543 aa11.22□□□□□ -0.61
USP6NL-205ENST00000609104 CBLN1P23435 193 aa11.22□□□□□ -0.61
USP6NL-205ENST00000609104 FHITP49789 147 aa11.22□□□□□ -0.61
USP6NL-205ENST00000609104 LCN2P80188 198 aa11.22□□□□□ -0.61
USP6NL-205ENST00000609104 CENPWQ5EE01 88 aa11.22□□□□□ -0.61
USP6NL-205ENST00000609104 TMEM170BQ5T4T1 132 aa11.22□□□□□ -0.61
USP6NL-205ENST00000609104 LAMTOR1Q6IAA8 161 aa11.22□□□□□ -0.61
USP6NL-205ENST00000609104 KCNE5Q9UJ90 142 aa11.22□□□□□ -0.61
USP6NL-205ENST00000609104 C17orf51A8MQB3 221 aa11.22□□□□□ -0.61
USP6NL-205ENST00000609104 H2BFSP57053 126 aa11.22□□□□□ -0.61
USP6NL-205ENST00000609104 RPS11P62280 158 aaKnown RBP eCLIP11.22□□□□□ -0.61
USP6NL-205ENST00000609104 LINC00469Q8N7U9 141 aa11.22□□□□□ -0.61
USP6NL-205ENST00000609104 CD1AP06126 327 aa11.22□□□□□ -0.61
USP6NL-205ENST00000609104 CDX1P47902 265 aaPredicted RBP11.22□□□□□ -0.61
USP6NL-205ENST00000609104 APCDD1LQ8NCL9 501 aa11.22□□□□□ -0.61
USP6NL-205ENST00000609104 TRBV20OR9-2A0A075B6H5 130 aa11.22□□□□□ -0.61
USP6NL-205ENST00000609104 TRBV9A0A0B4J1U6 114 aa11.22□□□□□ -0.61
USP6NL-205ENST00000609104 SUMO2P61956 95 aaKnown RBP11.22□□□□□ -0.61
USP6NL-205ENST00000609104 MMD2Q8IY49 270 aa11.22□□□□□ -0.61
USP6NL-205ENST00000609104 KIR2DL4Q99706 377 aa11.22□□□□□ -0.61
USP6NL-205ENST00000609104 SSBP3Q9BWW4 388 aaPredicted RBP11.22□□□□□ -0.61
USP6NL-205ENST00000609104 ATP5G2Q06055 141 aa11.22□□□□□ -0.61
USP6NL-205ENST00000609104 ST6GALNAC3Q8NDV1 305 aa11.22□□□□□ -0.61
USP6NL-205ENST00000609104 TRAV8-6A0A0B4J262 113 aa11.22□□□□□ -0.61
USP6NL-205ENST00000609104 A1L4Q6 167 aa11.22□□□□□ -0.61
USP6NL-205ENST00000609104 MARCH11A6NNE9 402 aa11.22□□□□□ -0.61
USP6NL-205ENST00000609104 ZCCHC14Q8WYQ9 949 aaKnown RBP11.22□□□□□ -0.61
USP6NL-205ENST00000609104 PSMB11A5LHX3 300 aa11.21□□□□□ -0.61
USP6NL-205ENST00000609104 LINC00305Q7Z4B0 112 aa11.21□□□□□ -0.61
USP6NL-205ENST00000609104 LRP5O75197 1615 aa11.21□□□□□ -0.61
USP6NL-205ENST00000609104 ZFP36L2P47974 494 aaKnown RBP11.21□□□□□ -0.61
USP6NL-205ENST00000609104 DUSP15Q9H1R2 295 aaPredicted RBP11.21□□□□□ -0.61
USP6NL-205ENST00000609104 DANCRP0C864 163 aa11.21□□□□□ -0.61
USP6NL-205ENST00000609104 C10orf126Q8N4M7 172 aa11.21□□□□□ -0.61
USP6NL-205ENST00000609104 IGHV3-66A0A0C4DH42 116 aa11.21□□□□□ -0.61
USP6NL-205ENST00000609104 ABCA7Q8IZY2 2146 aa11.21□□□□□ -0.61
USP6NL-205ENST00000609104 LINC00518Q8N0U6 118 aa11.21□□□□□ -0.61
USP6NL-205ENST00000609104 TXNDC17Q9BRA2 123 aa11.21□□□□□ -0.61
USP6NL-205ENST00000609104 IGHV3-23P01764 117 aa11.21□□□□□ -0.61
USP6NL-205ENST00000609104 NUDT10Q8NFP7 164 aa11.21□□□□□ -0.61
USP6NL-205ENST00000609104 NUDT11Q96G61 164 aa11.21□□□□□ -0.61
USP6NL-205ENST00000609104 SNAI2O43623 268 aa11.21□□□□□ -0.62
USP6NL-205ENST00000609104 AKAP6Q13023 2319 aa11.21□□□□□ -0.62
USP6NL-205ENST00000609104 ODAMA1E959 279 aa11.21□□□□□ -0.62
USP6NL-205ENST00000609104 RECKO95980 971 aa11.21□□□□□ -0.62
USP6NL-205ENST00000609104 SLC25A47Q6Q0C1 308 aa11.21□□□□□ -0.62
USP6NL-205ENST00000609104 IGHV3-35A0A0C4DH35 117 aa11.21□□□□□ -0.62
USP6NL-205ENST00000609104 TRBV5-5A0A0J9YX44 114 aa11.21□□□□□ -0.62
USP6NL-205ENST00000609104 SHISA5Q8N114 240 aa11.21□□□□□ -0.62
USP6NL-205ENST00000609104 OR11H4Q8NGC9 324 aa11.21□□□□□ -0.62
USP6NL-205ENST00000609104 TRAV30A0A087WSZ9 112 aa11.21□□□□□ -0.62
USP6NL-205ENST00000609104 NGFRP08138 427 aa11.2□□□□□ -0.62
USP6NL-205ENST00000609104 C10orf128Q5T292 105 aa11.2□□□□□ -0.62
USP6NL-205ENST00000609104 MTURNQ8N3F0 131 aa11.2□□□□□ -0.62
USP6NL-205ENST00000609104 DMRT1Q9Y5R6 373 aa11.2□□□□□ -0.62
USP6NL-205ENST00000609104 APC2O95996 2303 aa11.2□□□□□ -0.62
USP6NL-205ENST00000609104 IGKV1-8A0A0C4DH67 115 aa11.2□□□□□ -0.62
USP6NL-205ENST00000609104 FAM214BQ7L5A3 538 aa11.2□□□□□ -0.62
USP6NL-205ENST00000609104 HSPE1P61604 102 aaKnown RBP11.2□□□□□ -0.62
USP6NL-205ENST00000609104 FAM159AQ6UWV7 190 aa11.2□□□□□ -0.62
USP6NL-205ENST00000609104 BEND2Q8NDZ0 799 aa11.2□□□□□ -0.62
USP6NL-205ENST00000609104 DNASE2BQ8WZ79 361 aa11.2□□□□□ -0.62
USP6NL-205ENST00000609104 GBF1Q92538 1859 aa11.2□□□□□ -0.62
USP6NL-205ENST00000609104 COL18A1P39060 1754 aa11.2□□□□□ -0.62
USP6NL-205ENST00000609104 FOXI3A8MTJ6 420 aaPredicted RBP11.2□□□□□ -0.62
USP6NL-205ENST00000609104 ZNF658BQ4V348 819 aaPredicted RBP11.2□□□□□ -0.62
USP6NL-205ENST00000609104 REC114Q7Z4M0 266 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms