RNA–Protein interactions for RNA: ENST00000604367.1

CCDC12-211, Transcript of coiled-coil domain containing 12, humanhuman

Gene CCDC12, Length 2,412 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-211ENST00000604367 FAM74A7A6NL05 159 aa12.38□□□□□ -0.43
CCDC12-211ENST00000604367 FAM157AC9JC47 383 aa12.38□□□□□ -0.43
CCDC12-211ENST00000604367 LYNX1G3V0Z9 82 aa12.38□□□□□ -0.43
CCDC12-211ENST00000604367 DVL1O14640 695 aa12.38□□□□□ -0.43
CCDC12-211ENST00000604367 LYNX1P0DP58 116 aa12.38□□□□□ -0.43
CCDC12-211ENST00000604367 EFNB3Q15768 340 aa12.38□□□□□ -0.43
CCDC12-211ENST00000604367 FAM74A3Q4VXF1 159 aa12.38□□□□□ -0.43
CCDC12-211ENST00000604367 ZNF383Q8NA42 475 aa12.38□□□□□ -0.43
CCDC12-211ENST00000604367 SFT2D1Q8WV19 159 aa12.38□□□□□ -0.43
CCDC12-211ENST00000604367 ZCCHC14Q8WYQ9 949 aaKnown RBP12.38□□□□□ -0.43
CCDC12-211ENST00000604367 ZNF714Q96N38 554 aa12.38□□□□□ -0.43
CCDC12-211ENST00000604367 RBM14Q96PK6 669 aaKnown RBP12.38□□□□□ -0.43
CCDC12-211ENST00000604367 LINC00574Q9H8X3 128 aa12.38□□□□□ -0.43
CCDC12-211ENST00000604367 TMEM140Q9NV12 185 aa12.38□□□□□ -0.43
CCDC12-211ENST00000604367 RBFOX2O43251 390 aaKnown RBP eCLIP12.37□□□□□ -0.43
CCDC12-211ENST00000604367 LRRC10Q5BKY1 277 aa12.37□□□□□ -0.43
CCDC12-211ENST00000604367 OR4S2Q8NH73 311 aa12.37□□□□□ -0.43
CCDC12-211ENST00000604367 FAM122AQ96E09 287 aa12.37□□□□□ -0.43
CCDC12-211ENST00000604367 GAL3ST2Q9H3Q3 398 aa12.37□□□□□ -0.43
CCDC12-211ENST00000604367 GAB2Q9UQC2 676 aa12.37□□□□□ -0.43
CCDC12-211ENST00000604367 SPTBN1Q01082 2364 aaKnown RBP12.37□□□□□ -0.43
CCDC12-211ENST00000604367 LRRC75BQ2VPJ9 315 aa12.37□□□□□ -0.43
CCDC12-211ENST00000604367 HFEQ30201 348 aa12.37□□□□□ -0.43
CCDC12-211ENST00000604367 TMEM88Q6PEY1 159 aa12.37□□□□□ -0.43
CCDC12-211ENST00000604367 UNQ6494/PRO21346Q6UXR6 183 aa12.37□□□□□ -0.43
CCDC12-211ENST00000604367 COMMD1Q8N668 190 aa12.37□□□□□ -0.43
CCDC12-211ENST00000604367 CIB3Q96Q77 187 aaPredicted RBP12.37□□□□□ -0.43
CCDC12-211ENST00000604367 SCRT1Q9BWW7 348 aa12.37□□□□□ -0.43
CCDC12-211ENST00000604367 WDR61Q9GZS3 305 aaKnown RBP12.37□□□□□ -0.43
CCDC12-211ENST00000604367 VSIRQ9H7M9 311 aa12.37□□□□□ -0.43
CCDC12-211ENST00000604367 ITPR1Q14643 2758 aa12.37□□□□□ -0.43
CCDC12-211ENST00000604367 THBS3P49746 956 aa12.36□□□□□ -0.43
CCDC12-211ENST00000604367 PEA15Q15121 130 aa12.36□□□□□ -0.43
CCDC12-211ENST00000604367 SPSB3Q6PJ21 355 aa12.36□□□□□ -0.43
CCDC12-211ENST00000604367 SLC25A48Q6ZT89 311 aaKnown RBP12.36□□□□□ -0.43
CCDC12-211ENST00000604367 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.36□□□□□ -0.43
CCDC12-211ENST00000604367 RARRES2Q99969 163 aa12.36□□□□□ -0.43
CCDC12-211ENST00000604367 TMEM238LA0A1B0GVL6 79 aa12.36□□□□□ -0.43
CCDC12-211ENST00000604367 DNASE2O00115 360 aaPredicted RBP12.36□□□□□ -0.43
CCDC12-211ENST00000604367 TNFRSF13BO14836 293 aaPredicted RBP12.36□□□□□ -0.43
CCDC12-211ENST00000604367 KIR2DS2P43631 304 aa12.36□□□□□ -0.43
CCDC12-211ENST00000604367 NPBWR1P48145 328 aa12.36□□□□□ -0.43
CCDC12-211ENST00000604367 MEF2CQ06413 473 aaPredicted RBP12.36□□□□□ -0.43
CCDC12-211ENST00000604367 OR10P1Q8NGE3 313 aa12.36□□□□□ -0.43
CCDC12-211ENST00000604367 RHOVQ96L33 236 aa12.36□□□□□ -0.43
CCDC12-211ENST00000604367 TET2Q6N021 2002 aaPredicted RBP12.35□□□□□ -0.43
CCDC12-211ENST00000604367 PMS2P5A8MQ11 134 aa12.35□□□□□ -0.43
CCDC12-211ENST00000604367 PLA2G5P39877 138 aa12.35□□□□□ -0.43
CCDC12-211ENST00000604367 ELLP55199 621 aaPredicted RBP12.35□□□□□ -0.43
CCDC12-211ENST00000604367 RELBQ01201 579 aa12.35□□□□□ -0.43
CCDC12-211ENST00000604367 LFNGQ8NES3 379 aa12.35□□□□□ -0.43
CCDC12-211ENST00000604367 RPRMQ9NS64 109 aa12.35□□□□□ -0.43
CCDC12-211ENST00000604367 DCHS2Q6V1P9 2916 aa12.35□□□□□ -0.43
CCDC12-211ENST00000604367 PPIHO43447 177 aaKnown RBP12.35□□□□□ -0.43
CCDC12-211ENST00000604367 SNAPINO95295 136 aa12.35□□□□□ -0.43
CCDC12-211ENST00000604367 CT45A6P0DMU7 189 aa12.35□□□□□ -0.43
CCDC12-211ENST00000604367 CT45A5P0DMU8 189 aa12.35□□□□□ -0.43
CCDC12-211ENST00000604367 CT45A7P0DMV0 189 aa12.35□□□□□ -0.43
CCDC12-211ENST00000604367 TLE4Q04727 773 aa12.35□□□□□ -0.43
CCDC12-211ENST00000604367 OR4A47Q6IF82 309 aa12.35□□□□□ -0.43
CCDC12-211ENST00000604367 HEPN1Q6WQI6 88 aa12.35□□□□□ -0.43
CCDC12-211ENST00000604367 ZNF600Q6ZNG1 722 aa12.35□□□□□ -0.43
CCDC12-211ENST00000604367 TAF15Q92804 592 aaKnown RBP eCLIP12.35□□□□□ -0.43
CCDC12-211ENST00000604367 PBDC1Q9BVG4 233 aa12.35□□□□□ -0.43
CCDC12-211ENST00000604367 HIVEP3Q5T1R4 2406 aa12.34□□□□□ -0.43
CCDC12-211ENST00000604367 EIF3GO75821 320 aaKnown RBP eCLIP12.34□□□□□ -0.43
CCDC12-211ENST00000604367 DAOP14920 347 aa12.34□□□□□ -0.43
CCDC12-211ENST00000604367 COL8A2P25067 703 aa12.34□□□□□ -0.43
CCDC12-211ENST00000604367 HAGHQ16775 308 aa12.34□□□□□ -0.43
CCDC12-211ENST00000604367 AKIRIN2Q53H80 203 aa12.34□□□□□ -0.43
CCDC12-211ENST00000604367 IGKV1-16P04430 117 aa12.33□□□□□ -0.43
CCDC12-211ENST00000604367 SPCS3P61009 180 aa12.33□□□□□ -0.43
CCDC12-211ENST00000604367 TMEM30BQ3MIR4 351 aa12.33□□□□□ -0.43
CCDC12-211ENST00000604367 ZNF672Q499Z4 452 aaPredicted RBP12.33□□□□□ -0.43
CCDC12-211ENST00000604367 PINX1Q96BK5 328 aaKnown RBP12.33□□□□□ -0.43
CCDC12-211ENST00000604367 HEYLQ9NQ87 328 aaPredicted RBP12.33□□□□□ -0.43
CCDC12-211ENST00000604367 FAM90A9PA6NNJ1 464 aa12.33□□□□□ -0.44
CCDC12-211ENST00000604367 C15orf62A8K5M9 175 aa12.33□□□□□ -0.44
CCDC12-211ENST00000604367 IFNA10P01566 189 aa12.33□□□□□ -0.44
CCDC12-211ENST00000604367 LOXP28300 417 aaPredicted RBP12.33□□□□□ -0.44
CCDC12-211ENST00000604367 REG1BP48304 166 aa12.33□□□□□ -0.44
CCDC12-211ENST00000604367 CBLN2Q8IUK8 224 aa12.33□□□□□ -0.44
CCDC12-211ENST00000604367 ADTRPQ96IZ2 230 aa12.33□□□□□ -0.44
CCDC12-211ENST00000604367 PSMG3Q9BT73 122 aaPredicted RBP12.33□□□□□ -0.44
CCDC12-211ENST00000604367 PRORYQ9H606 182 aa12.33□□□□□ -0.44
CCDC12-211ENST00000604367 OR13C7P0DN81 318 aa12.32□□□□□ -0.44
CCDC12-211ENST00000604367 MYOD1P15172 320 aa12.32□□□□□ -0.44
CCDC12-211ENST00000604367 LCN15Q6UWW0 184 aa12.32□□□□□ -0.44
CCDC12-211ENST00000604367 CLCC1Q96S66 551 aa12.32□□□□□ -0.44
CCDC12-211ENST00000604367 TMEM147Q9BVK8 224 aa12.32□□□□□ -0.44
CCDC12-211ENST00000604367 SLC35D1Q9NTN3 355 aa12.32□□□□□ -0.44
CCDC12-211ENST00000604367 RBFOX3A6NFN3 312 aa12.32□□□□□ -0.44
CCDC12-211ENST00000604367 LY6HO94772 140 aa12.32□□□□□ -0.44
CCDC12-211ENST00000604367 ATF4P18848 351 aaPredicted RBP12.32□□□□□ -0.44
CCDC12-211ENST00000604367 FGF7P21781 194 aa12.32□□□□□ -0.44
CCDC12-211ENST00000604367 AARDQ4LEZ3 155 aa12.32□□□□□ -0.44
CCDC12-211ENST00000604367 DPPA3Q6W0C5 159 aa12.32□□□□□ -0.44
CCDC12-211ENST00000604367 ABHD12Q8N2K0 398 aa12.32□□□□□ -0.44
CCDC12-211ENST00000604367 HIPK2Q9H2X6 1198 aa12.32□□□□□ -0.44
CCDC12-211ENST00000604367 KAAG1Q9UBP8 84 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms