RNA–Protein interactions for RNA: ENST00000602716.5

PPFIA3-207, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 2,020 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-207ENST00000602716 C15orf54Q8N8G6 183 aa14.18□□□□□ -0.14
PPFIA3-207ENST00000602716 LY6G5BQ8NDX9 201 aa14.18□□□□□ -0.14
PPFIA3-207ENST00000602716 CT45A3Q8NHU0 189 aa14.18□□□□□ -0.14
PPFIA3-207ENST00000602716 RBMXL1Q96E39 390 aaKnown RBP14.18□□□□□ -0.14
PPFIA3-207ENST00000602716 CLCC1Q96S66 551 aa14.18□□□□□ -0.14
PPFIA3-207ENST00000602716 PROP1O75360 226 aa14.17□□□□□ -0.14
PPFIA3-207ENST00000602716 PRH1P02810 166 aa14.17□□□□□ -0.14
PPFIA3-207ENST00000602716 RPL35P42766 123 aaKnown RBP14.17□□□□□ -0.14
PPFIA3-207ENST00000602716 LCN2P80188 198 aa14.17□□□□□ -0.14
PPFIA3-207ENST00000602716 SELENOHQ8IZQ5 122 aaKnown RBP14.17□□□□□ -0.14
PPFIA3-207ENST00000602716 OR51H1Q8NH63 302 aa14.17□□□□□ -0.14
PPFIA3-207ENST00000602716 ABHD14AQ9BUJ0 271 aa14.17□□□□□ -0.14
PPFIA3-207ENST00000602716 APCP25054 2843 aa14.17□□□□□ -0.14
PPFIA3-207ENST00000602716 IGSF23A1L1A6 192 aa14.17□□□□□ -0.14
PPFIA3-207ENST00000602716 ZNF98A6NK75 572 aa14.17□□□□□ -0.14
PPFIA3-207ENST00000602716 PGLYRP1O75594 196 aaPredicted RBP14.17□□□□□ -0.14
PPFIA3-207ENST00000602716 NKX2-1P43699 371 aaPredicted RBP14.17□□□□□ -0.14
PPFIA3-207ENST00000602716 AKR1D1P51857 326 aa14.17□□□□□ -0.14
PPFIA3-207ENST00000602716 Q3ZCU0 254 aa14.17□□□□□ -0.14
PPFIA3-207ENST00000602716 RPL39P5Q59GN2 51 aa14.17□□□□□ -0.14
PPFIA3-207ENST00000602716 ZNF695Q8IW36 515 aa14.17□□□□□ -0.14
PPFIA3-207ENST00000602716 SPIN2AQ99865 258 aa14.17□□□□□ -0.14
PPFIA3-207ENST00000602716 SPIN2BQ9BPZ2 258 aa14.17□□□□□ -0.14
PPFIA3-207ENST00000602716 ZMAT5Q9UDW3 170 aaKnown RBP14.17□□□□□ -0.14
PPFIA3-207ENST00000602716 ARHGAP32A7KAX9 2087 aa14.16□□□□□ -0.14
PPFIA3-207ENST00000602716 LOC105371242A0A075B767 164 aa14.16□□□□□ -0.14
PPFIA3-207ENST00000602716 FAM24AA6NFZ4 105 aa14.16□□□□□ -0.14
PPFIA3-207ENST00000602716 C17orf98A8MV24 154 aa14.16□□□□□ -0.14
PPFIA3-207ENST00000602716 PITX3O75364 302 aa14.16□□□□□ -0.14
PPFIA3-207ENST00000602716 IGHV1-8P0DP01 117 aa14.16□□□□□ -0.14
PPFIA3-207ENST00000602716 EIF4EBP1Q13541 118 aaPredicted RBP14.16□□□□□ -0.14
PPFIA3-207ENST00000602716 AKIRIN2Q53H80 203 aa14.16□□□□□ -0.14
PPFIA3-207ENST00000602716 AWAT1Q58HT5 328 aa14.16□□□□□ -0.14
PPFIA3-207ENST00000602716 ZNF645Q8N7E2 425 aa14.16□□□□□ -0.14
PPFIA3-207ENST00000602716 EIF5A2Q9GZV4 153 aaKnown RBP14.16□□□□□ -0.14
PPFIA3-207ENST00000602716 LPAR2Q9HBW0 351 aa14.16□□□□□ -0.14
PPFIA3-207ENST00000602716 RPS10P5Q9NQ39 176 aa14.16□□□□□ -0.14
PPFIA3-207ENST00000602716 ONECUT1Q9UBC0 465 aa14.16□□□□□ -0.14
PPFIA3-207ENST00000602716 FASNP49327 2511 aaKnown RBP14.16□□□□□ -0.14
PPFIA3-207ENST00000602716 GPR37O15354 613 aa14.15□□□□□ -0.14
PPFIA3-207ENST00000602716 AKR1C3P42330 323 aa14.15□□□□□ -0.14
PPFIA3-207ENST00000602716 POLR2GP62487 172 aaKnown RBP eCLIP14.15□□□□□ -0.14
PPFIA3-207ENST00000602716 RPL30P62888 115 aaKnown RBP14.15□□□□□ -0.14
PPFIA3-207ENST00000602716 HABP2Q14520 560 aaPredicted RBP14.15□□□□□ -0.14
PPFIA3-207ENST00000602716 TMEM182Q6ZP80 229 aaPredicted RBP14.15□□□□□ -0.14
PPFIA3-207ENST00000602716 ODF3L1Q8IXM7 274 aa14.15□□□□□ -0.14
PPFIA3-207ENST00000602716 ZFP82Q8N141 532 aa14.15□□□□□ -0.14
PPFIA3-207ENST00000602716 Q8N7P7 452 aa14.15□□□□□ -0.14
PPFIA3-207ENST00000602716 C2CD4CQ8TF44 421 aa14.15□□□□□ -0.14
PPFIA3-207ENST00000602716 COA4Q9NYJ1 87 aa14.15□□□□□ -0.14
PPFIA3-207ENST00000602716 A0A1B0GW64 132 aa14.15□□□□□ -0.14
PPFIA3-207ENST00000602716 DUXBA0A1W2PPF3 345 aa14.15□□□□□ -0.14
PPFIA3-207ENST00000602716 PAX2Q02962 417 aa14.15□□□□□ -0.14
PPFIA3-207ENST00000602716 NMSQ5H8A3 153 aa14.15□□□□□ -0.14
PPFIA3-207ENST00000602716 EDARADDQ8WWZ3 215 aa14.15□□□□□ -0.14
PPFIA3-207ENST00000602716 HIST1H2BAQ96A08 127 aa14.15□□□□□ -0.14
PPFIA3-207ENST00000602716 LYRM2Q9NU23 88 aaPredicted RBP14.15□□□□□ -0.14
PPFIA3-207ENST00000602716 ABCA2Q9BZC7 2435 aa14.15□□□□□ -0.14
PPFIA3-207ENST00000602716 SAA2-SAA4A0A096LPE2 208 aa14.14□□□□□ -0.15
PPFIA3-207ENST00000602716 C7orf77A4D0Y5 90 aa14.14□□□□□ -0.15
PPFIA3-207ENST00000602716 SSSCA1O60232 199 aa14.14□□□□□ -0.15
PPFIA3-207ENST00000602716 SAA2P0DJI9 122 aaPredicted RBP14.14□□□□□ -0.15
PPFIA3-207ENST00000602716 UCP1P25874 307 aa14.14□□□□□ -0.15
PPFIA3-207ENST00000602716 B2MP61769 119 aa14.14□□□□□ -0.15
PPFIA3-207ENST00000602716 ARF6P62330 175 aa14.14□□□□□ -0.15
PPFIA3-207ENST00000602716 ZNF266Q14584 549 aa14.14□□□□□ -0.15
PPFIA3-207ENST00000602716 CLINT1Q14677 625 aa14.14□□□□□ -0.15
PPFIA3-207ENST00000602716 CLEC12BQ2HXU8 276 aa14.14□□□□□ -0.15
PPFIA3-207ENST00000602716 DEFB113Q30KQ7 82 aa14.14□□□□□ -0.15
PPFIA3-207ENST00000602716 OR2B11Q5JQS5 317 aa14.14□□□□□ -0.15
PPFIA3-207ENST00000602716 LFNGQ8NES3 379 aa14.14□□□□□ -0.15
PPFIA3-207ENST00000602716 FAM213BQ8TBF2 198 aa14.14□□□□□ -0.15
PPFIA3-207ENST00000602716 PBDC1Q9BVG4 233 aa14.14□□□□□ -0.15
PPFIA3-207ENST00000602716 RAB9BQ9NP90 201 aa14.14□□□□□ -0.15
PPFIA3-207ENST00000602716 YLPM1P49750 1951 aaKnown RBP14.14□□□□□ -0.15
PPFIA3-207ENST00000602716 NAV2Q8IVL1 2488 aa14.14□□□□□ -0.15
PPFIA3-207ENST00000602716 NDUFS8O00217 210 aa14.14□□□□□ -0.15
PPFIA3-207ENST00000602716 LIPFP07098 398 aa14.14□□□□□ -0.15
PPFIA3-207ENST00000602716 SNRNP70P08621 437 aaKnown RBP14.14□□□□□ -0.15
PPFIA3-207ENST00000602716 CXorf66Q5JRM2 361 aaPredicted RBP14.14□□□□□ -0.15
PPFIA3-207ENST00000602716 SLC25A48Q6ZT89 311 aaKnown RBP14.14□□□□□ -0.15
PPFIA3-207ENST00000602716 CMTM1Q8IZ96 169 aa14.14□□□□□ -0.15
PPFIA3-207ENST00000602716 OR10A7Q8NGE5 316 aa14.14□□□□□ -0.15
PPFIA3-207ENST00000602716 SLC25A31Q9H0C2 315 aa14.14□□□□□ -0.15
PPFIA3-207ENST00000602716 SLC35B3Q9H1N7 401 aa14.14□□□□□ -0.15
PPFIA3-207ENST00000602716 TUBA4BQ9H853 241 aa14.14□□□□□ -0.15
PPFIA3-207ENST00000602716 LINC00473A8K010 186 aa14.13□□□□□ -0.15
PPFIA3-207ENST00000602716 ANKRD17O75179 2603 aaKnown RBP14.13□□□□□ -0.15
PPFIA3-207ENST00000602716 IFNA4P05014 189 aa14.13□□□□□ -0.15
PPFIA3-207ENST00000602716 ATP6V0CP27449 155 aa14.13□□□□□ -0.15
PPFIA3-207ENST00000602716 GPR12P47775 334 aa14.13□□□□□ -0.15
PPFIA3-207ENST00000602716 RAB5BP61020 215 aa14.13□□□□□ -0.15
PPFIA3-207ENST00000602716 LYG1Q8N1E2 194 aa14.13□□□□□ -0.15
PPFIA3-207ENST00000602716 TMEM252Q8N6L7 170 aa14.13□□□□□ -0.15
PPFIA3-207ENST00000602716 ZNF251Q9BRH9 671 aa14.13□□□□□ -0.15
PPFIA3-207ENST00000602716 MAGT1Q9H0U3 335 aa14.13□□□□□ -0.15
PPFIA3-207ENST00000602716 SIRT7Q9NRC8 400 aa14.13□□□□□ -0.15
PPFIA3-207ENST00000602716 MED13LQ71F56 2210 aa14.13□□□□□ -0.15
PPFIA3-207ENST00000602716 PCP4L1A6NKN8 68 aa14.12□□□□□ -0.15
PPFIA3-207ENST00000602716 UMAD1C9J7I0 102 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms