RNA–Protein interactions for RNA: ENST00000600791.5

SHKBP1-226, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 494 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-226ENST00000600791 GNG2P59768 71 aa11.48□□□□□ -0.57
SHKBP1-226ENST00000600791 RPL30P62888 115 aaKnown RBP11.48□□□□□ -0.57
SHKBP1-226ENST00000600791 CDK10Q15131 360 aa11.48□□□□□ -0.57
SHKBP1-226ENST00000600791 OR2B11Q5JQS5 317 aa11.48□□□□□ -0.57
SHKBP1-226ENST00000600791 CNIH2Q6PI25 160 aa11.48□□□□□ -0.57
SHKBP1-226ENST00000600791 IL34Q6ZMJ4 242 aa11.48□□□□□ -0.57
SHKBP1-226ENST00000600791 USMG5Q96IX5 58 aa11.48□□□□□ -0.57
SHKBP1-226ENST00000600791 OR51E2Q9H255 320 aa11.48□□□□□ -0.57
SHKBP1-226ENST00000600791 Q9H521 79 aa11.48□□□□□ -0.57
SHKBP1-226ENST00000600791 SSR3Q9UNL2 185 aa11.48□□□□□ -0.57
SHKBP1-226ENST00000600791 RBMX2Q9Y388 322 aaKnown RBP11.48□□□□□ -0.57
SHKBP1-226ENST00000600791 MPPED1O15442 326 aa11.47□□□□□ -0.57
SHKBP1-226ENST00000600791 CREBL2O60519 120 aaPredicted RBP11.47□□□□□ -0.57
SHKBP1-226ENST00000600791 TUSC2O75896 110 aa11.47□□□□□ -0.57
SHKBP1-226ENST00000600791 PRH1P02810 166 aa11.47□□□□□ -0.57
SHKBP1-226ENST00000600791 IGHV4-30-4P0DP06 118 aa11.47□□□□□ -0.57
SHKBP1-226ENST00000600791 SDC2P34741 201 aa11.47□□□□□ -0.57
SHKBP1-226ENST00000600791 MXD1Q05195 221 aa11.47□□□□□ -0.57
SHKBP1-226ENST00000600791 C10orf55Q5SWW7 151 aa11.47□□□□□ -0.57
SHKBP1-226ENST00000600791 ZNF773Q6PK81 442 aa11.47□□□□□ -0.57
SHKBP1-226ENST00000600791 Q8N1Y9 231 aa11.47□□□□□ -0.57
SHKBP1-226ENST00000600791 DCUN1D5Q9BTE7 237 aa11.47□□□□□ -0.57
SHKBP1-226ENST00000600791 YTHDF1Q9BYJ9 559 aaKnown RBP11.47□□□□□ -0.57
SHKBP1-226ENST00000600791 RNF167Q9H6Y7 350 aa11.47□□□□□ -0.57
SHKBP1-226ENST00000600791 AKIP1Q9NQ31 210 aa11.47□□□□□ -0.57
SHKBP1-226ENST00000600791 RHBDL2Q9NX52 303 aa11.47□□□□□ -0.57
SHKBP1-226ENST00000600791 ANXA10Q9UJ72 324 aa11.47□□□□□ -0.57
SHKBP1-226ENST00000600791 MRPS7Q9Y2R9 242 aaKnown RBP11.47□□□□□ -0.57
SHKBP1-226ENST00000600791 PRELID3BQ9Y3B1 194 aa11.47□□□□□ -0.57
SHKBP1-226ENST00000600791 C3orf84H3BNL1 204 aa11.46□□□□□ -0.57
SHKBP1-226ENST00000600791 SLC22A5O76082 557 aa11.46□□□□□ -0.57
SHKBP1-226ENST00000600791 ACTL6BO94805 426 aa11.46□□□□□ -0.57
SHKBP1-226ENST00000600791 CLEC2LP0C7M8 214 aa11.46□□□□□ -0.57
SHKBP1-226ENST00000600791 RHOGP84095 191 aa11.46□□□□□ -0.57
SHKBP1-226ENST00000600791 ZNF45Q02386 682 aa11.46□□□□□ -0.57
SHKBP1-226ENST00000600791 EIF4EBP1Q13541 118 aaPredicted RBP11.46□□□□□ -0.57
SHKBP1-226ENST00000600791 RPEL1Q2QD12 228 aa11.46□□□□□ -0.57
SHKBP1-226ENST00000600791 MMD2Q8IY49 270 aa11.46□□□□□ -0.57
SHKBP1-226ENST00000600791 VKORC1L1Q8N0U8 176 aa11.46□□□□□ -0.57
SHKBP1-226ENST00000600791 SLC25A38Q96DW6 304 aa11.46□□□□□ -0.57
SHKBP1-226ENST00000600791 SPIN2AQ99865 258 aa11.46□□□□□ -0.57
SHKBP1-226ENST00000600791 SPIN2BQ9BPZ2 258 aa11.46□□□□□ -0.57
SHKBP1-226ENST00000600791 TRBV9A0A0B4J1U6 114 aa11.45□□□□□ -0.58
SHKBP1-226ENST00000600791 FAM223BA6NKX1 122 aa11.45□□□□□ -0.58
SHKBP1-226ENST00000600791 EXOSC2Q13868 293 aaKnown RBP11.45□□□□□ -0.58
SHKBP1-226ENST00000600791 FAM223AQ8IWN6 122 aa11.45□□□□□ -0.58
SHKBP1-226ENST00000600791 OR5H6Q8NGV6 325 aa11.45□□□□□ -0.58
SHKBP1-226ENST00000600791 OR4S2Q8NH73 311 aa11.45□□□□□ -0.58
SHKBP1-226ENST00000600791 MUC7Q8TAX7 377 aa11.45□□□□□ -0.58
SHKBP1-226ENST00000600791 TCTEX1D2Q8WW35 142 aa11.45□□□□□ -0.58
SHKBP1-226ENST00000600791 SNAPC3Q92966 411 aa11.45□□□□□ -0.58
SHKBP1-226ENST00000600791 HSD17B10Q99714 261 aaKnown RBP11.45□□□□□ -0.58
SHKBP1-226ENST00000600791 ZMAT4Q9H898 229 aa11.45□□□□□ -0.58
SHKBP1-226ENST00000600791 SPATA2Q9UM82 520 aa11.45□□□□□ -0.58
SHKBP1-226ENST00000600791 DYNC2H1Q8NCM8 4307 aaKnown RBP11.44□□□□□ -0.58
SHKBP1-226ENST00000600791 LOC100506127A0A0U1RQW1 187 aa11.44□□□□□ -0.58
SHKBP1-226ENST00000600791 A8MZ25 164 aa11.44□□□□□ -0.58
SHKBP1-226ENST00000600791 BMPR1BO00238 502 aa11.44□□□□□ -0.58
SHKBP1-226ENST00000600791 OR2A4O95047 310 aa11.44□□□□□ -0.58
SHKBP1-226ENST00000600791 CSN3P07498 182 aa11.44□□□□□ -0.58
SHKBP1-226ENST00000600791 SCAND1P57086 179 aa11.44□□□□□ -0.58
SHKBP1-226ENST00000600791 BRWD1-AS2P59051 145 aa11.44□□□□□ -0.58
SHKBP1-226ENST00000600791 TATDN3Q17R31 274 aa11.44□□□□□ -0.58
SHKBP1-226ENST00000600791 SGPP2Q8IWX5 399 aa11.44□□□□□ -0.58
SHKBP1-226ENST00000600791 TTC9CQ8N5M4 171 aa11.44□□□□□ -0.58
SHKBP1-226ENST00000600791 GPHA2Q96T91 129 aa11.44□□□□□ -0.58
SHKBP1-226ENST00000600791 TM2D3Q9BRN9 247 aa11.44□□□□□ -0.58
SHKBP1-226ENST00000600791 C19orf73Q9NVV2 129 aa11.44□□□□□ -0.58
SHKBP1-226ENST00000600791 TAS2R8Q9NYW2 309 aa11.44□□□□□ -0.58
SHKBP1-226ENST00000600791 SIGLEC8Q9NYZ4 499 aa11.44□□□□□ -0.58
SHKBP1-226ENST00000600791 ETV7Q9Y603 341 aa11.44□□□□□ -0.58
SHKBP1-226ENST00000600791 TRAV18A0A075B6X5 111 aa11.43□□□□□ -0.58
SHKBP1-226ENST00000600791 HMX3A6NHT5 357 aa11.43□□□□□ -0.58
SHKBP1-226ENST00000600791 TEX22C9J3V5 150 aa11.43□□□□□ -0.58
SHKBP1-226ENST00000600791 H0Y980 276 aa11.43□□□□□ -0.58
SHKBP1-226ENST00000600791 KBTBD11O94819 623 aa11.43□□□□□ -0.58
SHKBP1-226ENST00000600791 PTHLHP12272 177 aa11.43□□□□□ -0.58
SHKBP1-226ENST00000600791 ARPC4P59998 168 aa11.43□□□□□ -0.58
SHKBP1-226ENST00000600791 ATP5G2Q06055 141 aa11.43□□□□□ -0.58
SHKBP1-226ENST00000600791 IDNKQ5T6J7 187 aa11.43□□□□□ -0.58
SHKBP1-226ENST00000600791 PUSL1Q8N0Z8 303 aaKnown RBP11.43□□□□□ -0.58
SHKBP1-226ENST00000600791 GVQW1Q8N7I0 195 aa11.43□□□□□ -0.58
SHKBP1-226ENST00000600791 BEST4Q8NFU0 473 aa11.43□□□□□ -0.58
SHKBP1-226ENST00000600791 VSTM2AQ8TAG5 236 aa11.43□□□□□ -0.58
SHKBP1-226ENST00000600791 TMEM167AQ8TBQ9 72 aa11.43□□□□□ -0.58
SHKBP1-226ENST00000600791 OR2A7Q96R45 310 aa11.43□□□□□ -0.58
SHKBP1-226ENST00000600791 THAP7Q9BT49 309 aaPredicted RBP11.43□□□□□ -0.58
SHKBP1-226ENST00000600791 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.42□□□□□ -0.58
SHKBP1-226ENST00000600791 OR2J3O76001 311 aa11.42□□□□□ -0.58
SHKBP1-226ENST00000600791 FCGR2CP31995 323 aa11.42□□□□□ -0.58
SHKBP1-226ENST00000600791 NEDD8Q15843 81 aa11.42□□□□□ -0.58
SHKBP1-226ENST00000600791 C15orf32Q32M92 178 aa11.42□□□□□ -0.58
SHKBP1-226ENST00000600791 CASC10Q5T4H9 136 aa11.42□□□□□ -0.58
SHKBP1-226ENST00000600791 LCN12Q6JVE5 192 aa11.42□□□□□ -0.58
SHKBP1-226ENST00000600791 ZNF66Q6ZN08 573 aa11.42□□□□□ -0.58
SHKBP1-226ENST00000600791 C19orf35Q6ZS72 473 aa11.42□□□□□ -0.58
SHKBP1-226ENST00000600791 HOGA1Q86XE5 327 aa11.42□□□□□ -0.58
SHKBP1-226ENST00000600791 MFSD4AQ8N468 514 aa11.42□□□□□ -0.58
SHKBP1-226ENST00000600791 NECAP1Q8NC96 275 aa11.42□□□□□ -0.58
SHKBP1-226ENST00000600791 OR13F1Q8NGS4 319 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms