RNA–Protein interactions for RNA: ENST00000598209.5

UPF1-205, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-205ENST00000598209 BRWD1-AS2P59051 145 aa10.81□□□□□ -0.68
UPF1-205ENST00000598209 CATR1Q13166 79 aa10.81□□□□□ -0.68
UPF1-205ENST00000598209 MRGPRG-AS1Q2M3A8 158 aa10.81□□□□□ -0.68
UPF1-205ENST00000598209 AKIRIN2Q53H80 203 aa10.81□□□□□ -0.68
UPF1-205ENST00000598209 C1QL4Q86Z23 238 aa10.81□□□□□ -0.68
UPF1-205ENST00000598209 LFNGQ8NES3 379 aa10.81□□□□□ -0.68
UPF1-205ENST00000598209 MYOZ3Q8TDC0 251 aa10.81□□□□□ -0.68
UPF1-205ENST00000598209 BORCS5Q969J3 196 aa10.81□□□□□ -0.68
UPF1-205ENST00000598209 SLIRPQ9GZT3 109 aaKnown RBP10.81□□□□□ -0.68
UPF1-205ENST00000598209 C6orf62Q9GZU0 229 aaPredicted RBP10.81□□□□□ -0.68
UPF1-205ENST00000598209 FXYD6Q9H0Q3 95 aa10.81□□□□□ -0.68
UPF1-205ENST00000598209 KLK11Q9UBX7 282 aa10.81□□□□□ -0.68
UPF1-205ENST00000598209 NOTCH3Q9UM47 2321 aa10.81□□□□□ -0.68
UPF1-205ENST00000598209 G3V4G9 280 aa10.8□□□□□ -0.68
UPF1-205ENST00000598209 GNRHRP30968 328 aa10.8□□□□□ -0.68
UPF1-205ENST00000598209 RAB9AP51151 201 aa10.8□□□□□ -0.68
UPF1-205ENST00000598209 TSPAN5P62079 268 aa10.8□□□□□ -0.68
UPF1-205ENST00000598209 KIAA0141Q14154 515 aaPredicted RBP10.8□□□□□ -0.68
UPF1-205ENST00000598209 PRSS8Q16651 343 aa10.8□□□□□ -0.68
UPF1-205ENST00000598209 ACTBL2Q562R1 376 aa10.8□□□□□ -0.68
UPF1-205ENST00000598209 VKORC1L1Q8N0U8 176 aa10.8□□□□□ -0.68
UPF1-205ENST00000598209 SPAG16Q8N0X2 631 aa10.8□□□□□ -0.68
UPF1-205ENST00000598209 WFDC9Q8NEX5 89 aa10.8□□□□□ -0.68
UPF1-205ENST00000598209 OR5M8Q8NGP6 311 aa10.8□□□□□ -0.68
UPF1-205ENST00000598209 OR51H1Q8NH63 302 aa10.8□□□□□ -0.68
UPF1-205ENST00000598209 FCAMRQ8WWV6 532 aa10.8□□□□□ -0.68
UPF1-205ENST00000598209 DIRAS2Q96HU8 199 aa10.8□□□□□ -0.68
UPF1-205ENST00000598209 DUX3Q96PT4 197 aa10.8□□□□□ -0.68
UPF1-205ENST00000598209 MTFP1Q9UDX5 166 aa10.8□□□□□ -0.68
UPF1-205ENST00000598209 GABARAPH6UMI1 98 aa10.79□□□□□ -0.68
UPF1-205ENST00000598209 M0QYG6 137 aa10.79□□□□□ -0.68
UPF1-205ENST00000598209 CCL24O00175 119 aa10.79□□□□□ -0.68
UPF1-205ENST00000598209 CREBL2O60519 120 aaPredicted RBP10.79□□□□□ -0.68
UPF1-205ENST00000598209 RAMP3O60896 148 aa10.79□□□□□ -0.68
UPF1-205ENST00000598209 MYCNOSP40205 109 aa10.79□□□□□ -0.68
UPF1-205ENST00000598209 DGCR2P98153 550 aa10.79□□□□□ -0.68
UPF1-205ENST00000598209 DEFA6Q01524 100 aa10.79□□□□□ -0.68
UPF1-205ENST00000598209 TNXAQ16473 311 aa10.79□□□□□ -0.68
UPF1-205ENST00000598209 DEFB136Q30KP8 78 aa10.79□□□□□ -0.68
UPF1-205ENST00000598209 OXLD1Q5BKU9 147 aa10.79□□□□□ -0.68
UPF1-205ENST00000598209 VAX1Q5SQQ9 334 aa10.79□□□□□ -0.68
UPF1-205ENST00000598209 SAMD5Q5TGI4 173 aa10.79□□□□□ -0.68
UPF1-205ENST00000598209 AADACL3Q5VUY0 350 aa10.79□□□□□ -0.68
UPF1-205ENST00000598209 PYHIN1Q6K0P9 492 aa10.79□□□□□ -0.68
UPF1-205ENST00000598209 MRPL41Q8IXM3 137 aaKnown RBP10.79□□□□□ -0.68
UPF1-205ENST00000598209 LINC00482Q8N8I6 264 aa10.79□□□□□ -0.68
UPF1-205ENST00000598209 ZNF491Q8N8L2 437 aa10.79□□□□□ -0.68
UPF1-205ENST00000598209 CASTOR1Q8WTX7 329 aa10.79□□□□□ -0.68
UPF1-205ENST00000598209 C4orf3Q8WVX3 66 aa10.79□□□□□ -0.68
UPF1-205ENST00000598209 RAX2Q96IS3 184 aa10.79□□□□□ -0.68
UPF1-205ENST00000598209 UBE2E2Q96LR5 201 aa10.79□□□□□ -0.68
UPF1-205ENST00000598209 P2RX4Q99571 388 aa10.79□□□□□ -0.68
UPF1-205ENST00000598209 RBM38Q9H0Z9 239 aaKnown RBP10.79□□□□□ -0.68
UPF1-205ENST00000598209 ZNF430Q9H8G1 570 aaPredicted RBP10.79□□□□□ -0.68
UPF1-205ENST00000598209 GNB4Q9HAV0 340 aa10.79□□□□□ -0.68
UPF1-205ENST00000598209 GPR31O00270 319 aa10.78□□□□□ -0.68
UPF1-205ENST00000598209 RBFOX2O43251 390 aaKnown RBP eCLIP10.78□□□□□ -0.68
UPF1-205ENST00000598209 PGLYRP1O75594 196 aaPredicted RBP10.78□□□□□ -0.68
UPF1-205ENST00000598209 HRASP01112 189 aa10.78□□□□□ -0.68
UPF1-205ENST00000598209 MRPS10P82664 201 aaKnown RBP10.78□□□□□ -0.68
UPF1-205ENST00000598209 IL18Q14116 193 aa10.78□□□□□ -0.68
UPF1-205ENST00000598209 RNASE10Q5GAN6 216 aaKnown RBP10.78□□□□□ -0.68
UPF1-205ENST00000598209 MMD2Q8IY49 270 aa10.78□□□□□ -0.68
UPF1-205ENST00000598209 PUSL1Q8N0Z8 303 aaKnown RBP10.78□□□□□ -0.68
UPF1-205ENST00000598209 MCFD2Q8NI22 146 aa10.78□□□□□ -0.68
UPF1-205ENST00000598209 VSTM2AQ8TAG5 236 aa10.78□□□□□ -0.68
UPF1-205ENST00000598209 SRSF12Q8WXF0 261 aaKnown RBP10.78□□□□□ -0.68
UPF1-205ENST00000598209 RHOVQ96L33 236 aa10.78□□□□□ -0.68
UPF1-205ENST00000598209 PHB2Q99623 299 aa10.78□□□□□ -0.68
UPF1-205ENST00000598209 TINAGL1Q9GZM7 467 aaPredicted RBP10.78□□□□□ -0.68
UPF1-205ENST00000598209 NXF2Q9GZY0 626 aaKnown RBP10.78□□□□□ -0.68
UPF1-205ENST00000598209 RSL24D1Q9UHA3 163 aaKnown RBP10.78□□□□□ -0.68
UPF1-205ENST00000598209 VSIG4Q9Y279 399 aa10.78□□□□□ -0.68
UPF1-205ENST00000598209 NOTCH1P46531 2555 aa10.77□□□□□ -0.68
UPF1-205ENST00000598209 MSGN1A6NI15 193 aa10.77□□□□□ -0.69
UPF1-205ENST00000598209 ACTL6BO94805 426 aa10.77□□□□□ -0.69
UPF1-205ENST00000598209 KBTBD11O94819 623 aa10.77□□□□□ -0.69
UPF1-205ENST00000598209 OR2A4O95047 310 aa10.77□□□□□ -0.69
UPF1-205ENST00000598209 CD3DP04234 171 aa10.77□□□□□ -0.69
UPF1-205ENST00000598209 RLN1P04808 185 aa10.77□□□□□ -0.69
UPF1-205ENST00000598209 IFNA6P05013 189 aa10.77□□□□□ -0.69
UPF1-205ENST00000598209 IGLL1P15814 213 aa10.77□□□□□ -0.69
UPF1-205ENST00000598209 TBPP20226 339 aa10.77□□□□□ -0.69
UPF1-205ENST00000598209 CD40LGP29965 261 aa10.77□□□□□ -0.69
UPF1-205ENST00000598209 BEAN1Q3B7T3 259 aa10.77□□□□□ -0.69
UPF1-205ENST00000598209 PHLDA2Q53GA4 152 aa10.77□□□□□ -0.69
UPF1-205ENST00000598209 ASPHD1Q5U4P2 390 aa10.77□□□□□ -0.69
UPF1-205ENST00000598209 LPCAT3Q6P1A2 487 aa10.77□□□□□ -0.69
UPF1-205ENST00000598209 SSX9Q7RTT3 188 aa10.77□□□□□ -0.69
UPF1-205ENST00000598209 CMTM1Q8IZ96 169 aa10.77□□□□□ -0.69
UPF1-205ENST00000598209 POC5Q8NA72 575 aa10.77□□□□□ -0.69
UPF1-205ENST00000598209 TMEM229BQ8NBD8 167 aa10.77□□□□□ -0.69
UPF1-205ENST00000598209 OR5T1Q8NG75 326 aa10.77□□□□□ -0.69
UPF1-205ENST00000598209 CD300LFQ8TDQ1 290 aa10.77□□□□□ -0.69
UPF1-205ENST00000598209 SMIM4Q8WVI0 70 aa10.77□□□□□ -0.69
UPF1-205ENST00000598209 TMEM68Q96MH6 324 aa10.77□□□□□ -0.69
UPF1-205ENST00000598209 MS4A10Q96PG2 267 aa10.77□□□□□ -0.69
UPF1-205ENST00000598209 OR5B12Q96R08 314 aa10.77□□□□□ -0.69
UPF1-205ENST00000598209 OR2A7Q96R45 310 aa10.77□□□□□ -0.69
UPF1-205ENST00000598209 ZNF355PQ9NSJ1 428 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms