RNA–Protein interactions for RNA: ENST00000597023.1

PPFIA4-208, Transcript of PTPRF interacting protein alpha 4, humanhuman

TSL 4

Gene PPFIA4, Length 496 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA4-208ENST00000597023 C10orf55Q5SWW7 151 aa11.96□□□□□ -0.49
PPFIA4-208ENST00000597023 VKORC1L1Q8N0U8 176 aa11.96□□□□□ -0.49
PPFIA4-208ENST00000597023 RSRP1Q9BUV0 290 aa11.96□□□□□ -0.49
PPFIA4-208ENST00000597023 ADAM30Q9UKF2 790 aa11.96□□□□□ -0.49
PPFIA4-208ENST00000597023 SPATA2Q9UM82 520 aa11.96□□□□□ -0.49
PPFIA4-208ENST00000597023 H3BUA1 57 aa11.95□□□□□ -0.5
PPFIA4-208ENST00000597023 TRBV12-3P01733 135 aa11.95□□□□□ -0.5
PPFIA4-208ENST00000597023 KCTD9Q7L273 389 aa11.95□□□□□ -0.5
PPFIA4-208ENST00000597023 OSR1Q8TAX0 266 aaPredicted RBP11.95□□□□□ -0.5
PPFIA4-208ENST00000597023 SRSF12Q8WXF0 261 aaKnown RBP11.95□□□□□ -0.5
PPFIA4-208ENST00000597023 S100A16Q96FQ6 103 aaKnown RBP11.95□□□□□ -0.5
PPFIA4-208ENST00000597023 OR4C12Q96R67 309 aa11.95□□□□□ -0.5
PPFIA4-208ENST00000597023 AIFM2Q9BRQ8 373 aa11.95□□□□□ -0.5
PPFIA4-208ENST00000597023 TINAGL1Q9GZM7 467 aaPredicted RBP11.95□□□□□ -0.5
PPFIA4-208ENST00000597023 ZNF430Q9H8G1 570 aaPredicted RBP11.95□□□□□ -0.5
PPFIA4-208ENST00000597023 RANGRFQ9HD47 186 aaPredicted RBP11.95□□□□□ -0.5
PPFIA4-208ENST00000597023 TAS2R8Q9NYW2 309 aa11.95□□□□□ -0.5
PPFIA4-208ENST00000597023 MRPS7Q9Y2R9 242 aaKnown RBP11.95□□□□□ -0.5
PPFIA4-208ENST00000597023 A0A0G2JLM5 398 aa11.94□□□□□ -0.5
PPFIA4-208ENST00000597023 MEIS3P1A6NDR6 274 aa11.94□□□□□ -0.5
PPFIA4-208ENST00000597023 MPPED1O15442 326 aa11.94□□□□□ -0.5
PPFIA4-208ENST00000597023 TNFSF12O43508 249 aa11.94□□□□□ -0.5
PPFIA4-208ENST00000597023 AIREO43918 545 aa11.94□□□□□ -0.5
PPFIA4-208ENST00000597023 GP9P14770 177 aa11.94□□□□□ -0.5
PPFIA4-208ENST00000597023 ARPC4P59998 168 aa11.94□□□□□ -0.5
PPFIA4-208ENST00000597023 LSM3P62310 102 aaKnown RBP11.94□□□□□ -0.5
PPFIA4-208ENST00000597023 OVCH2Q7RTZ1 564 aa11.94□□□□□ -0.5
PPFIA4-208ENST00000597023 BEST4Q8NFU0 473 aa11.94□□□□□ -0.5
PPFIA4-208ENST00000597023 TCTEX1D2Q8WW35 142 aa11.94□□□□□ -0.5
PPFIA4-208ENST00000597023 BORCS5Q969J3 196 aa11.94□□□□□ -0.5
PPFIA4-208ENST00000597023 KCTD12Q96CX2 325 aaKnown RBP11.94□□□□□ -0.5
PPFIA4-208ENST00000597023 CCL28Q9NRJ3 127 aa11.94□□□□□ -0.5
PPFIA4-208ENST00000597023 SMAD5-AS1Q9Y6J3 95 aa11.94□□□□□ -0.5
PPFIA4-208ENST00000597023 TRIM64CA6NLI5 447 aa11.93□□□□□ -0.5
PPFIA4-208ENST00000597023 OR9G9P0C7N8 305 aa11.93□□□□□ -0.5
PPFIA4-208ENST00000597023 AADACP22760 399 aa11.93□□□□□ -0.5
PPFIA4-208ENST00000597023 FCGR2CP31995 323 aa11.93□□□□□ -0.5
PPFIA4-208ENST00000597023 BRWD1-AS2P59051 145 aa11.93□□□□□ -0.5
PPFIA4-208ENST00000597023 DYRK1AQ13627 763 aa11.93□□□□□ -0.5
PPFIA4-208ENST00000597023 CDK10Q15131 360 aa11.93□□□□□ -0.5
PPFIA4-208ENST00000597023 MSMO1Q15800 293 aa11.93□□□□□ -0.5
PPFIA4-208ENST00000597023 MFSD4AQ8N468 514 aa11.93□□□□□ -0.5
PPFIA4-208ENST00000597023 ADAD2Q8NCV1 583 aaKnown RBP11.93□□□□□ -0.5
PPFIA4-208ENST00000597023 OR6Q1Q8NGQ2 317 aa11.93□□□□□ -0.5
PPFIA4-208ENST00000597023 SECTM1Q8WVN6 248 aa11.93□□□□□ -0.5
PPFIA4-208ENST00000597023 WWC2-AS2Q96NR7 200 aa11.93□□□□□ -0.5
PPFIA4-208ENST00000597023 HSD17B10Q99714 261 aaKnown RBP11.93□□□□□ -0.5
PPFIA4-208ENST00000597023 U3KQK5 164 aa11.93□□□□□ -0.5
PPFIA4-208ENST00000597023 COL7A1Q02388 2944 aa11.92□□□□□ -0.5
PPFIA4-208ENST00000597023 HMX3A6NHT5 357 aa11.92□□□□□ -0.5
PPFIA4-208ENST00000597023 ACTL6BO94805 426 aa11.92□□□□□ -0.5
PPFIA4-208ENST00000597023 BRI3O95415 125 aa11.92□□□□□ -0.5
PPFIA4-208ENST00000597023 NHLRC4P0CG21 123 aaPredicted RBP11.92□□□□□ -0.5
PPFIA4-208ENST00000597023 SYNJ2BPP57105 145 aa11.92□□□□□ -0.5
PPFIA4-208ENST00000597023 EIF4EBP1Q13541 118 aaPredicted RBP11.92□□□□□ -0.5
PPFIA4-208ENST00000597023 C19orf35Q6ZS72 473 aa11.92□□□□□ -0.5
PPFIA4-208ENST00000597023 SSX9Q7RTT3 188 aa11.92□□□□□ -0.5
PPFIA4-208ENST00000597023 HOGA1Q86XE5 327 aa11.92□□□□□ -0.5
PPFIA4-208ENST00000597023 ZBTB34Q8NCN2 500 aa11.92□□□□□ -0.5
PPFIA4-208ENST00000597023 VSTM2AQ8TAG5 236 aa11.92□□□□□ -0.5
PPFIA4-208ENST00000597023 CMTM3Q96MX0 182 aa11.92□□□□□ -0.5
PPFIA4-208ENST00000597023 ELOVL1Q9BW60 279 aa11.92□□□□□ -0.5
PPFIA4-208ENST00000597023 AUNIPQ9H7T9 357 aa11.92□□□□□ -0.5
PPFIA4-208ENST00000597023 PEF1Q9UBV8 284 aaKnown RBP11.92□□□□□ -0.5
PPFIA4-208ENST00000597023 XRCC3O43542 346 aa11.91□□□□□ -0.5
PPFIA4-208ENST00000597023 ZP3P21754 424 aa11.91□□□□□ -0.5
PPFIA4-208ENST00000597023 RPS19P39019 145 aaKnown RBP11.91□□□□□ -0.5
PPFIA4-208ENST00000597023 KIR2DS2P43631 304 aa11.91□□□□□ -0.5
PPFIA4-208ENST00000597023 FXYD4P59646 89 aa11.91□□□□□ -0.5
PPFIA4-208ENST00000597023 RHOGP84095 191 aa11.91□□□□□ -0.5
PPFIA4-208ENST00000597023 ZNF45Q02386 682 aa11.91□□□□□ -0.5
PPFIA4-208ENST00000597023 KLF5Q13887 457 aaPredicted RBP11.91□□□□□ -0.5
PPFIA4-208ENST00000597023 ZNF343Q6P1L6 599 aa11.91□□□□□ -0.5
PPFIA4-208ENST00000597023 ANKRD13BQ86YJ7 626 aa11.91□□□□□ -0.5
PPFIA4-208ENST00000597023 SBSPONQ8IVN8 264 aa11.91□□□□□ -0.5
PPFIA4-208ENST00000597023 MMD2Q8IY49 270 aa11.91□□□□□ -0.5
PPFIA4-208ENST00000597023 OR13F1Q8NGS4 319 aa11.91□□□□□ -0.5
PPFIA4-208ENST00000597023 SNAPC3Q92966 411 aa11.91□□□□□ -0.5
PPFIA4-208ENST00000597023 AKIP1Q9NQ31 210 aa11.91□□□□□ -0.5
PPFIA4-208ENST00000597023 SMIM31A0A1B0GVY4 71 aa11.9□□□□□ -0.5
PPFIA4-208ENST00000597023 E7EUB6 86 aa11.9□□□□□ -0.5
PPFIA4-208ENST00000597023 PPYP01298 95 aa11.9□□□□□ -0.5
PPFIA4-208ENST00000597023 MYOD1P15172 320 aa11.9□□□□□ -0.5
PPFIA4-208ENST00000597023 FAM209BQ5JX69 171 aa11.9□□□□□ -0.5
PPFIA4-208ENST00000597023 ZNF66Q6ZN08 573 aa11.9□□□□□ -0.5
PPFIA4-208ENST00000597023 OR4S2Q8NH73 311 aa11.9□□□□□ -0.5
PPFIA4-208ENST00000597023 YIPF6Q96EC8 236 aa11.9□□□□□ -0.5
PPFIA4-208ENST00000597023 USMG5Q96IX5 58 aa11.9□□□□□ -0.5
PPFIA4-208ENST00000597023 FYTTD1Q96QD9 318 aaKnown RBP11.9□□□□□ -0.5
PPFIA4-208ENST00000597023 SLC5A7Q9GZV3 580 aa11.9□□□□□ -0.5
PPFIA4-208ENST00000597023 SULT1C2O00338 296 aa11.89□□□□□ -0.51
PPFIA4-208ENST00000597023 OR2J3O76001 311 aa11.89□□□□□ -0.51
PPFIA4-208ENST00000597023 OR2A4O95047 310 aa11.89□□□□□ -0.51
PPFIA4-208ENST00000597023 IGLV1-51P01701 117 aa11.89□□□□□ -0.51
PPFIA4-208ENST00000597023 IL6RP08887 468 aaPredicted RBP11.89□□□□□ -0.51
PPFIA4-208ENST00000597023 FRMD6-AS1P0C7T7 363 aa11.89□□□□□ -0.51
PPFIA4-208ENST00000597023 ATP5G2Q06055 141 aa11.89□□□□□ -0.51
PPFIA4-208ENST00000597023 RPEL1Q2QD12 228 aa11.89□□□□□ -0.51
PPFIA4-208ENST00000597023 UBE2NLQ5JXB2 153 aa11.89□□□□□ -0.51
PPFIA4-208ENST00000597023 IL34Q6ZMJ4 242 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms