RNA–Protein interactions for RNA: ENST00000595803.5

SHKBP1-209, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-209ENST00000595803 IGHV1-3A0A0C4DH29 117 aa10.55□□□□□ -0.72
SHKBP1-209ENST00000595803 H0YJW9 148 aa10.55□□□□□ -0.72
SHKBP1-209ENST00000595803 NPFFO15130 113 aa10.55□□□□□ -0.72
SHKBP1-209ENST00000595803 CRYZL1O95825 349 aa10.55□□□□□ -0.72
SHKBP1-209ENST00000595803 HRASP01112 189 aa10.55□□□□□ -0.72
SHKBP1-209ENST00000595803 KRASP01116 189 aa10.55□□□□□ -0.72
SHKBP1-209ENST00000595803 IGKV1-39P01597 117 aa10.55□□□□□ -0.72
SHKBP1-209ENST00000595803 IGHV1-69P01742 117 aa10.55□□□□□ -0.72
SHKBP1-209ENST00000595803 IGKV1D-39P04432 117 aa10.55□□□□□ -0.72
SHKBP1-209ENST00000595803 G6PCP35575 357 aa10.55□□□□□ -0.72
SHKBP1-209ENST00000595803 H2BFSP57053 126 aa10.55□□□□□ -0.72
SHKBP1-209ENST00000595803 SRSF4Q08170 494 aaKnown RBP10.55□□□□□ -0.72
SHKBP1-209ENST00000595803 CD300CQ08708 224 aa10.55□□□□□ -0.72
SHKBP1-209ENST00000595803 GPR157Q5UAW9 335 aa10.55□□□□□ -0.72
SHKBP1-209ENST00000595803 CCDC144NLQ6NUI1 221 aa10.55□□□□□ -0.72
SHKBP1-209ENST00000595803 H2BFWTQ7Z2G1 175 aa10.55□□□□□ -0.72
SHKBP1-209ENST00000595803 LHFPL4Q7Z7J7 247 aa10.55□□□□□ -0.72
SHKBP1-209ENST00000595803 PDPNQ86YL7 162 aa10.55□□□□□ -0.72
SHKBP1-209ENST00000595803 TCTE3Q8IZS6 198 aa10.55□□□□□ -0.72
SHKBP1-209ENST00000595803 OR8H3Q8N146 312 aa10.55□□□□□ -0.72
SHKBP1-209ENST00000595803 GPR146Q96CH1 333 aa10.55□□□□□ -0.72
SHKBP1-209ENST00000595803 FLYWCH2Q96CP2 140 aaKnown RBP10.55□□□□□ -0.72
SHKBP1-209ENST00000595803 R3HDM4Q96D70 268 aa10.55□□□□□ -0.72
SHKBP1-209ENST00000595803 RANBP3Q9H6Z4 567 aaPredicted RBP10.55□□□□□ -0.72
SHKBP1-209ENST00000595803 WASHC3Q9Y3C0 194 aa10.55□□□□□ -0.72
SHKBP1-209ENST00000595803 MPTX1A8MV57 137 aa10.54□□□□□ -0.72
SHKBP1-209ENST00000595803 HNRNPCP07910 306 aaKnown RBP eCLIP10.54□□□□□ -0.72
SHKBP1-209ENST00000595803 NQO2P16083 231 aa10.54□□□□□ -0.72
SHKBP1-209ENST00000595803 RAB13P51153 203 aa10.54□□□□□ -0.72
SHKBP1-209ENST00000595803 RPS16P62249 146 aaKnown RBP10.54□□□□□ -0.72
SHKBP1-209ENST00000595803 SSX2Q16385 188 aa10.54□□□□□ -0.72
SHKBP1-209ENST00000595803 FAM219AQ8IW50 185 aa10.54□□□□□ -0.72
SHKBP1-209ENST00000595803 ZBTB8BQ8NAP8 495 aaPredicted RBP10.54□□□□□ -0.72
SHKBP1-209ENST00000595803 DMBX1Q8NFW5 382 aa10.54□□□□□ -0.72
SHKBP1-209ENST00000595803 OR2T35Q8NGX2 323 aa10.54□□□□□ -0.72
SHKBP1-209ENST00000595803 WDR89Q96FK6 387 aaPredicted RBP10.54□□□□□ -0.72
SHKBP1-209ENST00000595803 NMES1Q9C002 83 aa10.54□□□□□ -0.72
SHKBP1-209ENST00000595803 MMP24Q9Y5R2 645 aa10.54□□□□□ -0.72
SHKBP1-209ENST00000595803 PKD1L1Q8TDX9 2849 aa10.54□□□□□ -0.72
SHKBP1-209ENST00000595803 IGHV3OR16-10A0A075B7F0 116 aa10.53□□□□□ -0.72
SHKBP1-209ENST00000595803 IGHV3-72A0A0B4J1Y9 119 aa10.53□□□□□ -0.72
SHKBP1-209ENST00000595803 A0A1B0GU03 582 aa10.53□□□□□ -0.72
SHKBP1-209ENST00000595803 SHOXO15266 292 aa10.53□□□□□ -0.72
SHKBP1-209ENST00000595803 IGKV1-5P01602 117 aa10.53□□□□□ -0.72
SHKBP1-209ENST00000595803 SLC25A6P12236 298 aa10.53□□□□□ -0.72
SHKBP1-209ENST00000595803 ARHGDIBP52566 201 aa10.53□□□□□ -0.72
SHKBP1-209ENST00000595803 FGL1Q08830 312 aa10.53□□□□□ -0.72
SHKBP1-209ENST00000595803 TMEM177Q53S58 311 aa10.53□□□□□ -0.72
SHKBP1-209ENST00000595803 NMSQ5H8A3 153 aa10.53□□□□□ -0.72
SHKBP1-209ENST00000595803 LDLRAD2Q5SZI1 272 aa10.53□□□□□ -0.72
SHKBP1-209ENST00000595803 OR4C13Q8NGP0 309 aa10.53□□□□□ -0.72
SHKBP1-209ENST00000595803 OR1S1Q8NH92 325 aa10.53□□□□□ -0.72
SHKBP1-209ENST00000595803 OSR1Q8TAX0 266 aaPredicted RBP10.53□□□□□ -0.72
SHKBP1-209ENST00000595803 TRAV40A0A0B4J280 105 aa10.52□□□□□ -0.73
SHKBP1-209ENST00000595803 A0A1W2PPI3 338 aa10.52□□□□□ -0.73
SHKBP1-209ENST00000595803 SMLR1H3BR10 107 aa10.52□□□□□ -0.73
SHKBP1-209ENST00000595803 SCGB1D2O95969 90 aa10.52□□□□□ -0.73
SHKBP1-209ENST00000595803 RLN2P04090 185 aa10.52□□□□□ -0.73
SHKBP1-209ENST00000595803 PSMB6P28072 239 aa10.52□□□□□ -0.73
SHKBP1-209ENST00000595803 CD1BP29016 333 aa10.52□□□□□ -0.73
SHKBP1-209ENST00000595803 SAA4P35542 130 aa10.52□□□□□ -0.73
SHKBP1-209ENST00000595803 LGALS7P47929 136 aa10.52□□□□□ -0.73
SHKBP1-209ENST00000595803 SMCO1Q147U7 214 aa10.52□□□□□ -0.73
SHKBP1-209ENST00000595803 ZFP69Q49AA0 526 aa10.52□□□□□ -0.73
SHKBP1-209ENST00000595803 RUSC1-AS1Q66K80 236 aa10.52□□□□□ -0.73
SHKBP1-209ENST00000595803 SSX9Q7RTT3 188 aa10.52□□□□□ -0.73
SHKBP1-209ENST00000595803 ZFP57Q9NU63 452 aa10.52□□□□□ -0.73
SHKBP1-209ENST00000595803 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.52□□□□□ -0.733e-7■■□□□ 13.4
SHKBP1-209ENST00000595803 A0A0G2JRQ6 117 aa10.51□□□□□ -0.73
SHKBP1-209ENST00000595803 MARCH11A6NNE9 402 aa10.51□□□□□ -0.73
SHKBP1-209ENST00000595803 TIMM23O14925 209 aa10.51□□□□□ -0.73
SHKBP1-209ENST00000595803 SNAPC5O75971 98 aa10.51□□□□□ -0.73
SHKBP1-209ENST00000595803 AVPP01185 164 aa10.51□□□□□ -0.73
SHKBP1-209ENST00000595803 IGKV1-16P04430 117 aa10.51□□□□□ -0.73
SHKBP1-209ENST00000595803 FAM157CP0CG43 387 aa10.51□□□□□ -0.73
SHKBP1-209ENST00000595803 IGHV4-38-2P0DP08 117 aa10.51□□□□□ -0.73
SHKBP1-209ENST00000595803 BRS3P32247 399 aa10.51□□□□□ -0.73
SHKBP1-209ENST00000595803 BPIFB3P59826 476 aa10.51□□□□□ -0.73
SHKBP1-209ENST00000595803 LRRC37A5PQ49AS3 106 aa10.51□□□□□ -0.73
SHKBP1-209ENST00000595803 VKORC1L1Q8N0U8 176 aa10.51□□□□□ -0.73
SHKBP1-209ENST00000595803 PIP4P2Q8N4L2 257 aa10.51□□□□□ -0.73
SHKBP1-209ENST00000595803 OR4A16Q8NH70 328 aa10.51□□□□□ -0.73
SHKBP1-209ENST00000595803 THAP6Q8TBB0 222 aa10.51□□□□□ -0.73
SHKBP1-209ENST00000595803 PPP1R1CQ8WVI7 109 aa10.51□□□□□ -0.73
SHKBP1-209ENST00000595803 C17orf50Q8WW18 174 aa10.51□□□□□ -0.73
SHKBP1-209ENST00000595803 RHOVQ96L33 236 aa10.51□□□□□ -0.73
SHKBP1-209ENST00000595803 HARBI1Q96MB7 349 aa10.51□□□□□ -0.73
SHKBP1-209ENST00000595803 RNF5Q99942 180 aa10.51□□□□□ -0.73
SHKBP1-209ENST00000595803 MS4A7Q9GZW8 240 aaPredicted RBP10.51□□□□□ -0.73
SHKBP1-209ENST00000595803 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.51□□□□□ -0.73
SHKBP1-209ENST00000595803 CACNG5Q9UF02 275 aa10.51□□□□□ -0.73
SHKBP1-209ENST00000595803 FAM96BQ9Y3D0 163 aa10.51□□□□□ -0.73
SHKBP1-209ENST00000595803 CR1P17927 2039 aa10.51□□□□□ -0.73
SHKBP1-209ENST00000595803 ABCA1O95477 2261 aa10.51□□□□□ -0.73
SHKBP1-209ENST00000595803 WNK2Q9Y3S1 2297 aa10.5□□□□□ -0.73
SHKBP1-209ENST00000595803 FAM90A9PA6NNJ1 464 aa10.5□□□□□ -0.73
SHKBP1-209ENST00000595803 ST8SIA3O43173 380 aa10.5□□□□□ -0.73
SHKBP1-209ENST00000595803 RBMXL2O75526 392 aaKnown RBP10.5□□□□□ -0.73
SHKBP1-209ENST00000595803 C1QBP02746 253 aa10.5□□□□□ -0.73
SHKBP1-209ENST00000595803 NKX2-1P43699 371 aaPredicted RBP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms