RNA–Protein interactions for RNA: ENST00000594965.1

GTF2F1-204, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-204ENST00000594965 COMMD3Q9UBI1 195 aa17.25■□□□□ 0.35
GTF2F1-204ENST00000594965 SCOCQ9UIL1 159 aa17.25■□□□□ 0.35
GTF2F1-204ENST00000594965 MRPS7Q9Y2R9 242 aaKnown RBP17.25■□□□□ 0.35
GTF2F1-204ENST00000594965 IGHV4OR15-8A0A075B7B6 117 aa17.24■□□□□ 0.35
GTF2F1-204ENST00000594965 A0A087WW49 117 aa17.24■□□□□ 0.35
GTF2F1-204ENST00000594965 TRGV3P03979 118 aa17.24■□□□□ 0.35
GTF2F1-204ENST00000594965 NAT1P18440 290 aa17.24■□□□□ 0.35
GTF2F1-204ENST00000594965 MSMO1Q15800 293 aa17.24■□□□□ 0.35
GTF2F1-204ENST00000594965 C9orf66Q5T8R8 295 aa17.24■□□□□ 0.35
GTF2F1-204ENST00000594965 TCTEX1D2Q8WW35 142 aa17.24■□□□□ 0.35
GTF2F1-204ENST00000594965 DCUN1D4Q92564 292 aa17.24■□□□□ 0.35
GTF2F1-204ENST00000594965 TMEM68Q96MH6 324 aa17.24■□□□□ 0.35
GTF2F1-204ENST00000594965 CMTM3Q96MX0 182 aa17.24■□□□□ 0.35
GTF2F1-204ENST00000594965 ZNF430Q9H8G1 570 aaPredicted RBP17.24■□□□□ 0.35
GTF2F1-204ENST00000594965 IFT46Q9NQC8 304 aa17.24■□□□□ 0.35
GTF2F1-204ENST00000594965 MSGN1A6NI15 193 aa17.23■□□□□ 0.35
GTF2F1-204ENST00000594965 SEC14L6B5MCN3 397 aa17.23■□□□□ 0.35
GTF2F1-204ENST00000594965 H3BUA1 57 aa17.23■□□□□ 0.35
GTF2F1-204ENST00000594965 TNFSF12O43508 249 aa17.23■□□□□ 0.35
GTF2F1-204ENST00000594965 APELAP0DMC3 54 aa17.23■□□□□ 0.35
GTF2F1-204ENST00000594965 SLURP1P55000 103 aa17.23■□□□□ 0.35
GTF2F1-204ENST00000594965 TNXAQ16473 311 aa17.23■□□□□ 0.35
GTF2F1-204ENST00000594965 VKORC1L1Q8N0U8 176 aa17.23■□□□□ 0.35
GTF2F1-204ENST00000594965 SRSF12Q8WXF0 261 aaKnown RBP17.23■□□□□ 0.35
GTF2F1-204ENST00000594965 LINC01619G3V211 115 aa17.22■□□□□ 0.35
GTF2F1-204ENST00000594965 BRI3O95415 125 aa17.22■□□□□ 0.35
GTF2F1-204ENST00000594965 APOA1P02647 267 aa17.22■□□□□ 0.35
GTF2F1-204ENST00000594965 CD40LGP29965 261 aa17.22■□□□□ 0.35
GTF2F1-204ENST00000594965 PRSS3P35030 304 aa17.22■□□□□ 0.35
GTF2F1-204ENST00000594965 RFX2P48378 723 aa17.22■□□□□ 0.35
GTF2F1-204ENST00000594965 ALDH3B2P48448 385 aa17.22■□□□□ 0.35
GTF2F1-204ENST00000594965 FXYD4P59646 89 aa17.22■□□□□ 0.35
GTF2F1-204ENST00000594965 ZBTB34Q8NCN2 500 aa17.22■□□□□ 0.35
GTF2F1-204ENST00000594965 OR4S2Q8NH73 311 aa17.22■□□□□ 0.35
GTF2F1-204ENST00000594965 DLX4Q92988 240 aaPredicted RBP17.22■□□□□ 0.35
GTF2F1-204ENST00000594965 MRPS26Q9BYN8 205 aaKnown RBP17.22■□□□□ 0.35
GTF2F1-204ENST00000594965 SLC5A7Q9GZV3 580 aa17.22■□□□□ 0.35
GTF2F1-204ENST00000594965 ZNF355PQ9NSJ1 428 aa17.22■□□□□ 0.35
GTF2F1-204ENST00000594965 HPGDSO60760 199 aa17.21■□□□□ 0.35
GTF2F1-204ENST00000594965 ELK1P19419 428 aa17.21■□□□□ 0.35
GTF2F1-204ENST00000594965 RORCP51449 518 aa17.21■□□□□ 0.35
GTF2F1-204ENST00000594965 DGCR2P98153 550 aa17.21■□□□□ 0.35
GTF2F1-204ENST00000594965 GPR107Q5VW38 600 aa17.21■□□□□ 0.35
GTF2F1-204ENST00000594965 DHRS11Q6UWP2 260 aa17.21■□□□□ 0.35
GTF2F1-204ENST00000594965 LYSMD2Q8IV50 215 aa17.21■□□□□ 0.35
GTF2F1-204ENST00000594965 PUSL1Q8N0Z8 303 aaKnown RBP17.21■□□□□ 0.35
GTF2F1-204ENST00000594965 GPX8Q8TED1 209 aa17.21■□□□□ 0.35
GTF2F1-204ENST00000594965 ACOT12Q8WYK0 555 aa17.21■□□□□ 0.35
GTF2F1-204ENST00000594965 EHFQ9NZC4 300 aa17.21■□□□□ 0.35
GTF2F1-204ENST00000594965 RAMP3O60896 148 aa17.2■□□□□ 0.34
GTF2F1-204ENST00000594965 RBMXL2O75526 392 aaKnown RBP17.2■□□□□ 0.34
GTF2F1-204ENST00000594965 PMP2P02689 132 aa17.2■□□□□ 0.34
GTF2F1-204ENST00000594965 HSPB1P04792 205 aaKnown RBP17.2■□□□□ 0.34
GTF2F1-204ENST00000594965 DEFA5Q01523 94 aa17.2■□□□□ 0.34
GTF2F1-204ENST00000594965 DYRK1AQ13627 763 aa17.2■□□□□ 0.34
GTF2F1-204ENST00000594965 C10orf55Q5SWW7 151 aa17.2■□□□□ 0.34
GTF2F1-204ENST00000594965 ZNF818PQ6ZRF7 136 aa17.2■□□□□ 0.34
GTF2F1-204ENST00000594965 MMD2Q8IY49 270 aa17.2■□□□□ 0.34
GTF2F1-204ENST00000594965 ADAD2Q8NCV1 583 aaKnown RBP17.2■□□□□ 0.34
GTF2F1-204ENST00000594965 PHB2Q99623 299 aa17.2■□□□□ 0.34
GTF2F1-204ENST00000594965 TINAGL1Q9GZM7 467 aaPredicted RBP17.2■□□□□ 0.34
GTF2F1-204ENST00000594965 OVOL1O14753 267 aa17.19■□□□□ 0.34
GTF2F1-204ENST00000594965 TMEM17Q86X19 198 aa17.19■□□□□ 0.34
GTF2F1-204ENST00000594965 KBTBD11O94819 623 aa17.18■□□□□ 0.34
GTF2F1-204ENST00000594965 OR2A4O95047 310 aa17.18■□□□□ 0.34
GTF2F1-204ENST00000594965 GNRHRP30968 328 aa17.18■□□□□ 0.34
GTF2F1-204ENST00000594965 KIR2DS2P43631 304 aa17.18■□□□□ 0.34
GTF2F1-204ENST00000594965 SPAG16Q8N0X2 631 aa17.18■□□□□ 0.34
GTF2F1-204ENST00000594965 TMEM167AQ8TBQ9 72 aa17.18■□□□□ 0.34
GTF2F1-204ENST00000594965 MOB3AQ96BX8 217 aa17.18■□□□□ 0.34
GTF2F1-204ENST00000594965 OR2A7Q96R45 310 aa17.18■□□□□ 0.34
GTF2F1-204ENST00000594965 ZNF2Q9BSG1 426 aaPredicted RBP17.18■□□□□ 0.34
GTF2F1-204ENST00000594965 COA4Q9NYJ1 87 aa17.18■□□□□ 0.34
GTF2F1-204ENST00000594965 SMIM31A0A1B0GVY4 71 aa17.17■□□□□ 0.34
GTF2F1-204ENST00000594965 E7EUB6 86 aa17.17■□□□□ 0.34
GTF2F1-204ENST00000594965 SULT1C2O00338 296 aa17.17■□□□□ 0.34
GTF2F1-204ENST00000594965 CREBL2O60519 120 aaPredicted RBP17.17■□□□□ 0.34
GTF2F1-204ENST00000594965 OR9G9P0C7N8 305 aa17.17■□□□□ 0.34
GTF2F1-204ENST00000594965 TAS2R46P59540 309 aa17.17■□□□□ 0.34
GTF2F1-204ENST00000594965 DEFB121Q5J5C9 76 aa17.17■□□□□ 0.34
GTF2F1-204ENST00000594965 SNX29P2Q8IUI4 249 aa17.17■□□□□ 0.34
GTF2F1-204ENST00000594965 OR5H2Q8NGV7 314 aa17.17■□□□□ 0.34
GTF2F1-204ENST00000594965 VSTM2AQ8TAG5 236 aa17.17■□□□□ 0.34
GTF2F1-204ENST00000594965 A0A0G2JLM5 398 aa17.16■□□□□ 0.34
GTF2F1-204ENST00000594965 C13orf42A0A1B0GVH6 325 aa17.16■□□□□ 0.34
GTF2F1-204ENST00000594965 A0A1B0GW64 132 aa17.16■□□□□ 0.34
GTF2F1-204ENST00000594965 RBFOX2O43251 390 aaKnown RBP eCLIP17.16■□□□□ 0.341e-5■■■■□ 20.3
GTF2F1-204ENST00000594965 ACTL6BO94805 426 aa17.16■□□□□ 0.34
GTF2F1-204ENST00000594965 ZNF182P17025 639 aaPredicted RBP17.16■□□□□ 0.34
GTF2F1-204ENST00000594965 HLA-DMAP28067 261 aa17.16■□□□□ 0.34
GTF2F1-204ENST00000594965 HRH1P35367 487 aa17.16■□□□□ 0.34
GTF2F1-204ENST00000594965 ECI1P42126 302 aa17.16■□□□□ 0.34
GTF2F1-204ENST00000594965 HERV-K104P61576 105 aa17.16■□□□□ 0.34
GTF2F1-204ENST00000594965 ZNF45Q02386 682 aa17.16■□□□□ 0.34
GTF2F1-204ENST00000594965 SSX9Q7RTT3 188 aa17.16■□□□□ 0.34
GTF2F1-204ENST00000594965 GPR141Q7Z602 305 aa17.16■□□□□ 0.34
GTF2F1-204ENST00000594965 FXYD6Q9H0Q3 95 aa17.16■□□□□ 0.34
GTF2F1-204ENST00000594965 SCPEP1Q9HB40 452 aa17.16■□□□□ 0.34
GTF2F1-204ENST00000594965 ZMAT5Q9UDW3 170 aaKnown RBP17.16■□□□□ 0.34
GTF2F1-204ENST00000594965 ADAM30Q9UKF2 790 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms