RNA–Protein interactions for RNA: ENST00000594806.5

TRIM28-204, Transcript of tripartite motif containing 28, humanhuman

TSL 5

Gene TRIM28, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-204ENST00000594806 TERB2Q8NHR7 220 aa20.25■□□□□ 0.83
TRIM28-204ENST00000594806 ZNF486Q96H40 463 aaPredicted RBP20.25■□□□□ 0.83
TRIM28-204ENST00000594806 ZFP57Q9NU63 452 aa20.25■□□□□ 0.83
TRIM28-204ENST00000594806 V9GYH0 126 aa20.25■□□□□ 0.83
TRIM28-204ENST00000594806 ANKRD20A5PA0PJZ0 165 aa20.24■□□□□ 0.83
TRIM28-204ENST00000594806 DISC1C4P0D8 188 aa20.24■□□□□ 0.83
TRIM28-204ENST00000594806 HPRT1P00492 218 aa20.24■□□□□ 0.83
TRIM28-204ENST00000594806 IGHG4P01861 327 aa20.24■□□□□ 0.83
TRIM28-204ENST00000594806 ECI1P42126 302 aa20.24■□□□□ 0.83
TRIM28-204ENST00000594806 FOXE3Q13461 319 aa20.24■□□□□ 0.83
TRIM28-204ENST00000594806 PYDC2Q56P42 97 aa20.24■□□□□ 0.83
TRIM28-204ENST00000594806 C10orf99Q6UWK7 81 aa20.24■□□□□ 0.83
TRIM28-204ENST00000594806 CLCC1Q96S66 551 aa20.24■□□□□ 0.83
TRIM28-204ENST00000594806 GPHA2Q96T91 129 aa20.24■□□□□ 0.83
TRIM28-204ENST00000594806 THAP7Q9BT49 309 aaPredicted RBP20.24■□□□□ 0.83
TRIM28-204ENST00000594806 FAM212BQ9NTI7 297 aaPredicted RBP20.24■□□□□ 0.83
TRIM28-204ENST00000594806 TNCP24821 2201 aa20.23■□□□□ 0.83
TRIM28-204ENST00000594806 WNK1Q9H4A3 2382 aa20.23■□□□□ 0.83
TRIM28-204ENST00000594806 TRAV41A0A0B4J266 112 aa20.23■□□□□ 0.83
TRIM28-204ENST00000594806 FXYD3Q14802 87 aa20.23■□□□□ 0.83
TRIM28-204ENST00000594806 RNF152Q8N8N0 203 aa20.23■□□□□ 0.83
TRIM28-204ENST00000594806 OR51H1Q8NH63 302 aa20.23■□□□□ 0.83
TRIM28-204ENST00000594806 PLEKHA2Q9HB19 425 aa20.23■□□□□ 0.83
TRIM28-204ENST00000594806 TPSG1Q9NRR2 321 aa20.23■□□□□ 0.83
TRIM28-204ENST00000594806 NUBP2Q9Y5Y2 271 aa20.23■□□□□ 0.83
TRIM28-204ENST00000594806 CNIH1O95406 144 aa20.22■□□□□ 0.83
TRIM28-204ENST00000594806 SAA1P0DJI8 122 aaPredicted RBP20.22■□□□□ 0.83
TRIM28-204ENST00000594806 F2RP25116 425 aa20.22■□□□□ 0.83
TRIM28-204ENST00000594806 PPIFP30405 207 aaKnown RBP20.22■□□□□ 0.83
TRIM28-204ENST00000594806 TAS2R31P59538 309 aa20.22■□□□□ 0.83
TRIM28-204ENST00000594806 NDPQ00604 133 aa20.22■□□□□ 0.83
TRIM28-204ENST00000594806 AKIRIN2Q53H80 203 aa20.22■□□□□ 0.83
TRIM28-204ENST00000594806 CXorf66Q5JRM2 361 aaPredicted RBP20.22■□□□□ 0.83
TRIM28-204ENST00000594806 Q8N402 240 aa20.22■□□□□ 0.83
TRIM28-204ENST00000594806 OR4D10Q8NGI6 311 aa20.22■□□□□ 0.83
TRIM28-204ENST00000594806 ZFAND1Q8TCF1 268 aa20.22■□□□□ 0.83
TRIM28-204ENST00000594806 ARPC1AQ92747 370 aa20.22■□□□□ 0.83
TRIM28-204ENST00000594806 TMEM68Q96MH6 324 aa20.22■□□□□ 0.83
TRIM28-204ENST00000594806 ADARB2-AS1A8MUL3 147 aa20.21■□□□□ 0.83
TRIM28-204ENST00000594806 OR2A4O95047 310 aa20.21■□□□□ 0.83
TRIM28-204ENST00000594806 RLN1P04808 185 aa20.21■□□□□ 0.83
TRIM28-204ENST00000594806 ZNF735P0CB33 412 aa20.21■□□□□ 0.83
TRIM28-204ENST00000594806 SLC6A1P30531 599 aa20.21■□□□□ 0.83
TRIM28-204ENST00000594806 AP3S2P59780 193 aa20.21■□□□□ 0.83
TRIM28-204ENST00000594806 PRSS8Q16651 343 aa20.21■□□□□ 0.83
TRIM28-204ENST00000594806 NSUN5P1Q3KNT7 163 aa20.21■□□□□ 0.83
TRIM28-204ENST00000594806 MMD2Q8IY49 270 aa20.21■□□□□ 0.83
TRIM28-204ENST00000594806 MINDY2Q8NBR6 621 aa20.21■□□□□ 0.83
TRIM28-204ENST00000594806 OR4F17Q8NGA8 305 aa20.21■□□□□ 0.83
TRIM28-204ENST00000594806 ABHD5Q8WTS1 349 aa20.21■□□□□ 0.83
TRIM28-204ENST00000594806 DEDD2Q8WXF8 326 aa20.21■□□□□ 0.83
TRIM28-204ENST00000594806 RHOVQ96L33 236 aa20.21■□□□□ 0.83
TRIM28-204ENST00000594806 OR2A7Q96R45 310 aa20.21■□□□□ 0.83
TRIM28-204ENST00000594806 OR4F4Q96R69 305 aa20.21■□□□□ 0.83
TRIM28-204ENST00000594806 PRRT1Q99946 306 aa20.21■□□□□ 0.83
TRIM28-204ENST00000594806 COMMD9Q9P000 198 aa20.21■□□□□ 0.83
TRIM28-204ENST00000594806 A6NHS1 94 aa20.2■□□□□ 0.82
TRIM28-204ENST00000594806 RAMP3O60896 148 aa20.2■□□□□ 0.82
TRIM28-204ENST00000594806 EGR2P11161 476 aaPredicted RBP20.2■□□□□ 0.82
TRIM28-204ENST00000594806 PGAM2P15259 253 aa20.2■□□□□ 0.82
TRIM28-204ENST00000594806 NQO2P16083 231 aa20.2■□□□□ 0.82
TRIM28-204ENST00000594806 RND3P61587 244 aa20.2■□□□□ 0.82
TRIM28-204ENST00000594806 ZNF79Q15937 498 aa20.2■□□□□ 0.82
TRIM28-204ENST00000594806 POU2AF1Q16633 256 aa20.2■□□□□ 0.82
TRIM28-204ENST00000594806 TREML4Q6UXN2 200 aa20.2■□□□□ 0.82
TRIM28-204ENST00000594806 PUSL1Q8N0Z8 303 aaKnown RBP20.2■□□□□ 0.82
TRIM28-204ENST00000594806 OR4C16Q8NGL9 310 aa20.2■□□□□ 0.82
TRIM28-204ENST00000594806 OR4A5Q8NH83 315 aa20.2■□□□□ 0.82
TRIM28-204ENST00000594806 WSB1Q9Y6I7 421 aa20.2■□□□□ 0.82
TRIM28-204ENST00000594806 G3V318 75 aa20.19■□□□□ 0.82
TRIM28-204ENST00000594806 ACTL6BO94805 426 aa20.19■□□□□ 0.82
TRIM28-204ENST00000594806 PJVKQ0ZLH3 352 aa20.19■□□□□ 0.82
TRIM28-204ENST00000594806 SURF2Q15527 256 aaPredicted RBP20.19■□□□□ 0.82
TRIM28-204ENST00000594806 SCGB2B2Q4G0G5 96 aa20.19■□□□□ 0.82
TRIM28-204ENST00000594806 PHLDA2Q53GA4 152 aa20.19■□□□□ 0.82
TRIM28-204ENST00000594806 C19orf54Q5BKX5 351 aa20.19■□□□□ 0.82
TRIM28-204ENST00000594806 SLC2A9Q9NRM0 540 aa20.19■□□□□ 0.82
TRIM28-204ENST00000594806 SLC2A8Q9NY64 477 aa20.19■□□□□ 0.82
TRIM28-204ENST00000594806 BET1LQ9NYM9 111 aa20.19■□□□□ 0.82
TRIM28-204ENST00000594806 FBXO7Q9Y3I1 522 aa20.19■□□□□ 0.82
TRIM28-204ENST00000594806 ARPC1BO15143 372 aaKnown RBP20.18■□□□□ 0.82
TRIM28-204ENST00000594806 KBTBD11O94819 623 aa20.18■□□□□ 0.82
TRIM28-204ENST00000594806 IGLV1-40P01703 118 aa20.18■□□□□ 0.82
TRIM28-204ENST00000594806 PSMB8P28062 276 aa20.18■□□□□ 0.82
TRIM28-204ENST00000594806 MAS1LP35410 378 aa20.18■□□□□ 0.82
TRIM28-204ENST00000594806 FAUP35544 74 aaKnown RBP20.18■□□□□ 0.82
TRIM28-204ENST00000594806 RPL23AP62750 156 aaKnown RBP20.18■□□□□ 0.82
TRIM28-204ENST00000594806 ECSCRQ19T08 205 aa20.18■□□□□ 0.82
TRIM28-204ENST00000594806 MRGPRG-AS1Q2M3A8 158 aa20.18■□□□□ 0.82
TRIM28-204ENST00000594806 KHDC1LQ5JSQ8 128 aa20.18■□□□□ 0.82
TRIM28-204ENST00000594806 UNQ5815/PRO19632Q6UWF5 114 aa20.18■□□□□ 0.82
TRIM28-204ENST00000594806 CADM3Q8N126 398 aa20.18■□□□□ 0.82
TRIM28-204ENST00000594806 OR5M8Q8NGP6 311 aa20.18■□□□□ 0.82
TRIM28-204ENST00000594806 TMEM167AQ8TBQ9 72 aa20.18■□□□□ 0.82
TRIM28-204ENST00000594806 SCP2D1Q9UJQ7 156 aa20.18■□□□□ 0.82
TRIM28-204ENST00000594806 FOXA2Q9Y261 457 aaPredicted RBP20.18■□□□□ 0.82
TRIM28-204ENST00000594806 CD40LGP29965 261 aa20.17■□□□□ 0.82
TRIM28-204ENST00000594806 GNB1P62873 340 aa20.17■□□□□ 0.82
TRIM28-204ENST00000594806 SSBP2P81877 361 aaPredicted RBP20.17■□□□□ 0.82
TRIM28-204ENST00000594806 TMEM65Q6PI78 240 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms