RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 H2BFWTQ7Z2G1 175 aa12.31□□□□□ -0.44
VRK3-207ENST00000594092 TGIF2LXQ8IUE1 241 aa12.31□□□□□ -0.44
VRK3-207ENST00000594092 R3HDM4Q96D70 268 aa12.31□□□□□ -0.44
VRK3-207ENST00000594092 NABP2Q9BQ15 211 aa12.31□□□□□ -0.44
VRK3-207ENST00000594092 MAGT1Q9H0U3 335 aa12.31□□□□□ -0.44
VRK3-207ENST00000594092 SLC35D1Q9NTN3 355 aa12.31□□□□□ -0.44
VRK3-207ENST00000594092 AMMECR1Q9Y4X0 333 aaPredicted RBP12.31□□□□□ -0.44
VRK3-207ENST00000594092 MARCH11A6NNE9 402 aa12.3□□□□□ -0.44
VRK3-207ENST00000594092 RNASEK-C17orf49H0YIS7 233 aa12.3□□□□□ -0.44
VRK3-207ENST00000594092 H0YJW9 148 aa12.3□□□□□ -0.44
VRK3-207ENST00000594092 LY6LH3BQJ8 138 aa12.3□□□□□ -0.44
VRK3-207ENST00000594092 TAAR5O14804 337 aa12.3□□□□□ -0.44
VRK3-207ENST00000594092 GPR137BO60478 399 aa12.3□□□□□ -0.44
VRK3-207ENST00000594092 CRYZL1O95825 349 aa12.3□□□□□ -0.44
VRK3-207ENST00000594092 ARG1P05089 322 aa12.3□□□□□ -0.44
VRK3-207ENST00000594092 Q5PR19 223 aa12.3□□□□□ -0.44
VRK3-207ENST00000594092 GPR157Q5UAW9 335 aa12.3□□□□□ -0.44
VRK3-207ENST00000594092 OR5AN1Q8NGI8 311 aa12.3□□□□□ -0.44
VRK3-207ENST00000594092 ST8SIA2Q92186 375 aa12.3□□□□□ -0.44
VRK3-207ENST00000594092 RBMXL1Q96E39 390 aaKnown RBP12.3□□□□□ -0.44
VRK3-207ENST00000594092 TBX15Q96SF7 602 aa12.3□□□□□ -0.44
VRK3-207ENST00000594092 PCGF1Q9BSM1 259 aa12.3□□□□□ -0.44
VRK3-207ENST00000594092 HTR2BP41595 481 aa12.3□□□□□ -0.44
VRK3-207ENST00000594092 ERVK-16P61578 105 aa12.3□□□□□ -0.44
VRK3-207ENST00000594092 PAX8Q06710 450 aa12.3□□□□□ -0.44
VRK3-207ENST00000594092 RTL8BQ17RB0 113 aa12.3□□□□□ -0.44
VRK3-207ENST00000594092 LDLRAD2Q5SZI1 272 aa12.3□□□□□ -0.44
VRK3-207ENST00000594092 PDZD9Q8IXQ8 264 aa12.3□□□□□ -0.44
VRK3-207ENST00000594092 OR8H3Q8N146 312 aa12.3□□□□□ -0.44
VRK3-207ENST00000594092 C11orf1Q9H5F2 150 aa12.3□□□□□ -0.44
VRK3-207ENST00000594092 FAM90A26D6RGX4 464 aa12.29□□□□□ -0.44
VRK3-207ENST00000594092 CHST1O43916 411 aa12.29□□□□□ -0.44
VRK3-207ENST00000594092 APOA2P02652 100 aa12.29□□□□□ -0.44
VRK3-207ENST00000594092 IGKV1-16P04430 117 aa12.29□□□□□ -0.44
VRK3-207ENST00000594092 TAGLNQ01995 201 aaKnown RBP12.29□□□□□ -0.44
VRK3-207ENST00000594092 OR2C3Q8N628 320 aa12.29□□□□□ -0.44
VRK3-207ENST00000594092 C1orf159Q96HA4 380 aa12.29□□□□□ -0.44
VRK3-207ENST00000594092 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.29□□□□□ -0.44
VRK3-207ENST00000594092 UNC79Q9P2D8 2635 aa12.28□□□□□ -0.44
VRK3-207ENST00000594092 A0A1W2PRD5 423 aa12.28□□□□□ -0.44
VRK3-207ENST00000594092 A0A1W2PRF3 423 aa12.28□□□□□ -0.44
VRK3-207ENST00000594092 A0A1W2PRM7 423 aa12.28□□□□□ -0.44
VRK3-207ENST00000594092 ATP6V1G1O75348 118 aa12.28□□□□□ -0.44
VRK3-207ENST00000594092 GAPDHP04406 335 aaKnown RBP12.28□□□□□ -0.44
VRK3-207ENST00000594092 MSMBP08118 114 aa12.28□□□□□ -0.44
VRK3-207ENST00000594092 NQO2P16083 231 aa12.28□□□□□ -0.44
VRK3-207ENST00000594092 HTR1DP28221 377 aa12.28□□□□□ -0.44
VRK3-207ENST00000594092 CAV2P51636 162 aa12.28□□□□□ -0.44
VRK3-207ENST00000594092 MIDNQ504T8 468 aa12.28□□□□□ -0.44
VRK3-207ENST00000594092 DHRS7BQ6IAN0 325 aaPredicted RBP12.28□□□□□ -0.44
VRK3-207ENST00000594092 PRSS57Q6UWY2 283 aa12.28□□□□□ -0.44
VRK3-207ENST00000594092 KRTAP1-3Q8IUG1 177 aa12.28□□□□□ -0.44
VRK3-207ENST00000594092 STOML3Q8TAV4 291 aa12.28□□□□□ -0.44
VRK3-207ENST00000594092 RPEQ96AT9 228 aa12.28□□□□□ -0.44
VRK3-207ENST00000594092 RAB40CQ96S21 281 aa12.28□□□□□ -0.44
VRK3-207ENST00000594092 SLC25A31Q9H0C2 315 aa12.28□□□□□ -0.44
VRK3-207ENST00000594092 LYRM2Q9NU23 88 aaPredicted RBP12.28□□□□□ -0.44
VRK3-207ENST00000594092 DPM3Q9P2X0 92 aa12.28□□□□□ -0.44
VRK3-207ENST00000594092 FAM90A9PA6NNJ1 464 aa12.27□□□□□ -0.44
VRK3-207ENST00000594092 B4DSR2 109 aa12.27□□□□□ -0.44
VRK3-207ENST00000594092 SYNGR2O43760 224 aa12.27□□□□□ -0.44
VRK3-207ENST00000594092 RRASP10301 218 aa12.27□□□□□ -0.44
VRK3-207ENST00000594092 TPT1P13693 172 aaKnown RBP12.27□□□□□ -0.44
VRK3-207ENST00000594092 ARHGDIBP52566 201 aa12.27□□□□□ -0.44
VRK3-207ENST00000594092 RPL23AP62750 156 aaKnown RBP12.27□□□□□ -0.44
VRK3-207ENST00000594092 TPTE2P1Q5T6R2 138 aa12.27□□□□□ -0.44
VRK3-207ENST00000594092 ALKAL2Q6UX46 152 aa12.27□□□□□ -0.44
VRK3-207ENST00000594092 SSX9Q7RTT3 188 aa12.27□□□□□ -0.44
VRK3-207ENST00000594092 VKORC1L1Q8N0U8 176 aa12.27□□□□□ -0.44
VRK3-207ENST00000594092 SCARB1Q8WTV0 552 aa12.27□□□□□ -0.44
VRK3-207ENST00000594092 CYTL1Q9NRR1 136 aa12.27□□□□□ -0.44
VRK3-207ENST00000594092 FBXL17Q9UF56 701 aa12.27□□□□□ -0.44
VRK3-207ENST00000594092 IGHV1-3A0A0C4DH29 117 aa12.27□□□□□ -0.45
VRK3-207ENST00000594092 LEUTXA8MZ59 168 aa12.27□□□□□ -0.45
VRK3-207ENST00000594092 RNF223E7ERA6 249 aa12.27□□□□□ -0.45
VRK3-207ENST00000594092 H7C2Y5 167 aa12.27□□□□□ -0.45
VRK3-207ENST00000594092 RBMXL2O75526 392 aaKnown RBP12.27□□□□□ -0.45
VRK3-207ENST00000594092 MED6O75586 246 aa12.27□□□□□ -0.45
VRK3-207ENST00000594092 RAB14P61106 215 aa12.27□□□□□ -0.45
VRK3-207ENST00000594092 EIF5AP63241 154 aaKnown RBP12.27□□□□□ -0.45
VRK3-207ENST00000594092 LOXL1Q08397 574 aaPredicted RBP12.27□□□□□ -0.45
VRK3-207ENST00000594092 LHFPL4Q7Z7J7 247 aa12.27□□□□□ -0.45
VRK3-207ENST00000594092 LHX4Q969G2 390 aa12.27□□□□□ -0.45
VRK3-207ENST00000594092 PHYHIPLQ96FC7 376 aa12.27□□□□□ -0.45
VRK3-207ENST00000594092 REG4Q9BYZ8 158 aa12.27□□□□□ -0.45
VRK3-207ENST00000594092 FAM24AA6NFZ4 105 aa12.26□□□□□ -0.45
VRK3-207ENST00000594092 SRRM4A7MD48 611 aaKnown RBP12.26□□□□□ -0.45
VRK3-207ENST00000594092 TXNL1O43396 289 aa12.26□□□□□ -0.45
VRK3-207ENST00000594092 CEACAM3P40198 252 aa12.26□□□□□ -0.45
VRK3-207ENST00000594092 UBE2E1P51965 193 aa12.26□□□□□ -0.45
VRK3-207ENST00000594092 EWSR1Q01844 656 aaKnown RBP eCLIP12.26□□□□□ -0.45
VRK3-207ENST00000594092 TNFRSF9Q07011 255 aa12.26□□□□□ -0.45
VRK3-207ENST00000594092 POU2AF1Q16633 256 aa12.26□□□□□ -0.45
VRK3-207ENST00000594092 TMEM177Q53S58 311 aa12.26□□□□□ -0.45
VRK3-207ENST00000594092 PDPNQ86YL7 162 aa12.26□□□□□ -0.45
VRK3-207ENST00000594092 RHOVQ96L33 236 aa12.26□□□□□ -0.45
VRK3-207ENST00000594092 HSPB7Q9UBY9 170 aa12.26□□□□□ -0.45
VRK3-207ENST00000594092 WASHC3Q9Y3C0 194 aa12.26□□□□□ -0.45
VRK3-207ENST00000594092 WSB1Q9Y6I7 421 aa12.26□□□□□ -0.45
VRK3-207ENST00000594092 CSMD1Q96PZ7 3565 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms