RNA–Protein interactions for RNA: ENST00000590630.5

LIG3-213, Transcript of DNA ligase 3, humanhuman

TSL 5

Gene LIG3, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-213ENST00000590630 CNIH1O95406 144 aa9.32□□□□□ -0.92
LIG3-213ENST00000590630 IGLV1-40P01703 118 aa9.32□□□□□ -0.92
LIG3-213ENST00000590630 IFNA6P05013 189 aa9.32□□□□□ -0.92
LIG3-213ENST00000590630 PF4V1P10720 104 aa9.32□□□□□ -0.92
LIG3-213ENST00000590630 PSMB8P28062 276 aa9.32□□□□□ -0.92
LIG3-213ENST00000590630 TNFSF8P32971 234 aa9.32□□□□□ -0.92
LIG3-213ENST00000590630 BRWD1-AS2P59051 145 aa9.32□□□□□ -0.92
LIG3-213ENST00000590630 TAS2R19P59542 299 aa9.32□□□□□ -0.92
LIG3-213ENST00000590630 DGCR2P98153 550 aa9.32□□□□□ -0.92
LIG3-213ENST00000590630 FXYD3Q14802 87 aa9.32□□□□□ -0.92
LIG3-213ENST00000590630 AKIRIN2Q53H80 203 aa9.32□□□□□ -0.92
LIG3-213ENST00000590630 C19orf54Q5BKX5 351 aa9.32□□□□□ -0.92
LIG3-213ENST00000590630 ARRDC1Q8N5I2 433 aa9.32□□□□□ -0.92
LIG3-213ENST00000590630 VSTM2AQ8TAG5 236 aa9.32□□□□□ -0.92
LIG3-213ENST00000590630 CD300LFQ8TDQ1 290 aa9.32□□□□□ -0.92
LIG3-213ENST00000590630 GPHA2Q96T91 129 aa9.32□□□□□ -0.92
LIG3-213ENST00000590630 AIFM2Q9BRQ8 373 aa9.32□□□□□ -0.92
LIG3-213ENST00000590630 FXYD6Q9H0Q3 95 aa9.32□□□□□ -0.92
LIG3-213ENST00000590630 FBXO7Q9Y3I1 522 aa9.32□□□□□ -0.92
LIG3-213ENST00000590630 NUBP2Q9Y5Y2 271 aa9.32□□□□□ -0.92
LIG3-213ENST00000590630 M0QYG6 137 aa9.31□□□□□ -0.92
LIG3-213ENST00000590630 GPR31O00270 319 aa9.31□□□□□ -0.92
LIG3-213ENST00000590630 HRASP01112 189 aa9.31□□□□□ -0.92
LIG3-213ENST00000590630 CD3DP04234 171 aa9.31□□□□□ -0.92
LIG3-213ENST00000590630 RPLP1P05386 114 aaKnown RBP9.31□□□□□ -0.92
LIG3-213ENST00000590630 SAA1P0DJI8 122 aaPredicted RBP9.31□□□□□ -0.92
LIG3-213ENST00000590630 EGR2P11161 476 aaPredicted RBP9.31□□□□□ -0.92
LIG3-213ENST00000590630 S100GP29377 79 aa9.31□□□□□ -0.92
LIG3-213ENST00000590630 CDX1P47902 265 aaPredicted RBP9.31□□□□□ -0.92
LIG3-213ENST00000590630 UCP3P55916 312 aa9.31□□□□□ -0.92
LIG3-213ENST00000590630 GNB1P62873 340 aa9.31□□□□□ -0.92
LIG3-213ENST00000590630 SSBP2P81877 361 aaPredicted RBP9.31□□□□□ -0.92
LIG3-213ENST00000590630 PJVKQ0ZLH3 352 aa9.31□□□□□ -0.92
LIG3-213ENST00000590630 PRSS8Q16651 343 aa9.31□□□□□ -0.92
LIG3-213ENST00000590630 ECSCRQ19T08 205 aa9.31□□□□□ -0.92
LIG3-213ENST00000590630 AADACL3Q5VUY0 350 aa9.31□□□□□ -0.92
LIG3-213ENST00000590630 TMEM65Q6PI78 240 aa9.31□□□□□ -0.92
LIG3-213ENST00000590630 IDO2Q6ZQW0 420 aa9.31□□□□□ -0.92
LIG3-213ENST00000590630 SPAG16Q8N0X2 631 aa9.31□□□□□ -0.92
LIG3-213ENST00000590630 POC5Q8NA72 575 aa9.31□□□□□ -0.92
LIG3-213ENST00000590630 TMEM229BQ8NBD8 167 aa9.31□□□□□ -0.92
LIG3-213ENST00000590630 OR51H1Q8NH63 302 aa9.31□□□□□ -0.92
LIG3-213ENST00000590630 GRPEL2Q8TAA5 225 aa9.31□□□□□ -0.92
LIG3-213ENST00000590630 NDUFA13Q9P0J0 144 aa9.31□□□□□ -0.92
LIG3-213ENST00000590630 FOXA2Q9Y261 457 aaPredicted RBP9.31□□□□□ -0.92
LIG3-213ENST00000590630 A0A1W2PN81 502 aa9.3□□□□□ -0.92
LIG3-213ENST00000590630 FABP12A6NFH5 140 aa9.3□□□□□ -0.92
LIG3-213ENST00000590630 NUDT19A8MXV4 375 aa9.3□□□□□ -0.92
LIG3-213ENST00000590630 ARPC1BO15143 372 aaKnown RBP9.3□□□□□ -0.92
LIG3-213ENST00000590630 GSTZ1O43708 216 aaPredicted RBP9.3□□□□□ -0.92
LIG3-213ENST00000590630 RAMP3O60896 148 aa9.3□□□□□ -0.92
LIG3-213ENST00000590630 PGLYRP1O75594 196 aaPredicted RBP9.3□□□□□ -0.92
LIG3-213ENST00000590630 ACTL6BO94805 426 aa9.3□□□□□ -0.92
LIG3-213ENST00000590630 KBTBD11O94819 623 aa9.3□□□□□ -0.92
LIG3-213ENST00000590630 PF4P02776 101 aa9.3□□□□□ -0.92
LIG3-213ENST00000590630 CD74P04233 296 aa9.3□□□□□ -0.92
LIG3-213ENST00000590630 RLN1P04808 185 aa9.3□□□□□ -0.92
LIG3-213ENST00000590630 S100A5P33763 92 aa9.3□□□□□ -0.92
LIG3-213ENST00000590630 CHRNA7P36544 502 aa9.3□□□□□ -0.92
LIG3-213ENST00000590630 MRGPRG-AS1Q2M3A8 158 aa9.3□□□□□ -0.92
LIG3-213ENST00000590630 UNQ5815/PRO19632Q6UWF5 114 aa9.3□□□□□ -0.92
LIG3-213ENST00000590630 ZNF695Q8IW36 515 aa9.3□□□□□ -0.92
LIG3-213ENST00000590630 MMD2Q8IY49 270 aa9.3□□□□□ -0.92
LIG3-213ENST00000590630 SLC38A6Q8IZM9 456 aa9.3□□□□□ -0.92
LIG3-213ENST00000590630 KLHL30-AS1Q8NEE0 82 aa9.3□□□□□ -0.92
LIG3-213ENST00000590630 LFNGQ8NES3 379 aa9.3□□□□□ -0.92
LIG3-213ENST00000590630 OR5M8Q8NGP6 311 aa9.3□□□□□ -0.92
LIG3-213ENST00000590630 MYOZ3Q8TDC0 251 aa9.3□□□□□ -0.92
LIG3-213ENST00000590630 DGCR14Q96DF8 476 aaKnown RBP9.3□□□□□ -0.92
LIG3-213ENST00000590630 RHOVQ96L33 236 aa9.3□□□□□ -0.92
LIG3-213ENST00000590630 TMEM68Q96MH6 324 aa9.3□□□□□ -0.92
LIG3-213ENST00000590630 SOSTQ9BQB4 213 aa9.3□□□□□ -0.92
LIG3-213ENST00000590630 FAM103A1Q9BTL3 118 aaKnown RBP9.3□□□□□ -0.92
LIG3-213ENST00000590630 RSRP1Q9BUV0 290 aa9.3□□□□□ -0.92
LIG3-213ENST00000590630 TINAGL1Q9GZM7 467 aaPredicted RBP9.3□□□□□ -0.92
LIG3-213ENST00000590630 PLEKHA2Q9HB19 425 aa9.3□□□□□ -0.92
LIG3-213ENST00000590630 OR2A4O95047 310 aa9.29□□□□□ -0.92
LIG3-213ENST00000590630 RAB3DO95716 219 aa9.29□□□□□ -0.92
LIG3-213ENST00000590630 HPRT1P00492 218 aa9.29□□□□□ -0.92
LIG3-213ENST00000590630 F2RP25116 425 aa9.29□□□□□ -0.92
LIG3-213ENST00000590630 CD40LGP29965 261 aa9.29□□□□□ -0.92
LIG3-213ENST00000590630 RAB9AP51151 201 aa9.29□□□□□ -0.92
LIG3-213ENST00000590630 TAS2R31P59538 309 aa9.29□□□□□ -0.92
LIG3-213ENST00000590630 MEF2DQ14814 521 aa9.29□□□□□ -0.92
LIG3-213ENST00000590630 TNXAQ16473 311 aa9.29□□□□□ -0.92
LIG3-213ENST00000590630 STEAP1BQ6NZ63 245 aa9.29□□□□□ -0.92
LIG3-213ENST00000590630 LCNL1Q6ZST4 164 aa9.29□□□□□ -0.92
LIG3-213ENST00000590630 LHFPL1Q86WI0 220 aa9.29□□□□□ -0.92
LIG3-213ENST00000590630 VKORC1L1Q8N0U8 176 aa9.29□□□□□ -0.92
LIG3-213ENST00000590630 PUSL1Q8N0Z8 303 aaKnown RBP9.29□□□□□ -0.92
LIG3-213ENST00000590630 UBE2E2Q96LR5 201 aa9.29□□□□□ -0.92
LIG3-213ENST00000590630 OR2A7Q96R45 310 aa9.29□□□□□ -0.92
LIG3-213ENST00000590630 ZNF430Q9H8G1 570 aaPredicted RBP9.29□□□□□ -0.92
LIG3-213ENST00000590630 COMMD9Q9P000 198 aa9.29□□□□□ -0.92
LIG3-213ENST00000590630 SOX15O60248 233 aa9.28□□□□□ -0.92
LIG3-213ENST00000590630 NQO2P16083 231 aa9.28□□□□□ -0.92
LIG3-213ENST00000590630 MAS1LP35410 378 aa9.28□□□□□ -0.92
LIG3-213ENST00000590630 POU2AF1Q16633 256 aa9.28□□□□□ -0.92
LIG3-213ENST00000590630 PHLDA2Q53GA4 152 aa9.28□□□□□ -0.92
LIG3-213ENST00000590630 C8orf86Q6ZUL3 223 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms