RNA–Protein interactions for RNA: ENST00000590096.1

ATG4D-212, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 1,282 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-212ENST00000590096 TERB2Q8NHR7 220 aa16.77■□□□□ 0.28
ATG4D-212ENST00000590096 CD300LFQ8TDQ1 290 aa16.77■□□□□ 0.28
ATG4D-212ENST00000590096 CITED2Q99967 270 aaPredicted RBP16.77■□□□□ 0.28
ATG4D-212ENST00000590096 RAMP3O60896 148 aa16.76■□□□□ 0.27
ATG4D-212ENST00000590096 HRASP01112 189 aa16.76■□□□□ 0.27
ATG4D-212ENST00000590096 OPN1MWP04001 364 aa16.76■□□□□ 0.27
ATG4D-212ENST00000590096 CRYGBP07316 175 aa16.76■□□□□ 0.27
ATG4D-212ENST00000590096 SAA1P0DJI8 122 aaPredicted RBP16.76■□□□□ 0.27
ATG4D-212ENST00000590096 OPN1MW2P0DN77 364 aa16.76■□□□□ 0.27
ATG4D-212ENST00000590096 OPN1MW3P0DN78 364 aa16.76■□□□□ 0.27
ATG4D-212ENST00000590096 BRWD1-AS2P59051 145 aa16.76■□□□□ 0.27
ATG4D-212ENST00000590096 AP3S2P59780 193 aa16.76■□□□□ 0.27
ATG4D-212ENST00000590096 GNB1P62873 340 aa16.76■□□□□ 0.27
ATG4D-212ENST00000590096 HIST2H2BDQ6DRA6 164 aa16.76■□□□□ 0.27
ATG4D-212ENST00000590096 ZNF486Q96H40 463 aaPredicted RBP16.76■□□□□ 0.27
ATG4D-212ENST00000590096 AIFM2Q9BRQ8 373 aa16.76■□□□□ 0.27
ATG4D-212ENST00000590096 PLXNB1O43157 2135 aa16.75■□□□□ 0.27
ATG4D-212ENST00000590096 TCRBV4S1A1TA0A5B7 111 aa16.75■□□□□ 0.27
ATG4D-212ENST00000590096 CREBL2O60519 120 aaPredicted RBP16.75■□□□□ 0.27
ATG4D-212ENST00000590096 CNIH1O95406 144 aa16.75■□□□□ 0.27
ATG4D-212ENST00000590096 HPRT1P00492 218 aa16.75■□□□□ 0.27
ATG4D-212ENST00000590096 ZNF735P0CB33 412 aa16.75■□□□□ 0.27
ATG4D-212ENST00000590096 ECI1P42126 302 aa16.75■□□□□ 0.27
ATG4D-212ENST00000590096 NDPQ00604 133 aa16.75■□□□□ 0.27
ATG4D-212ENST00000590096 CD83Q01151 205 aa16.75■□□□□ 0.27
ATG4D-212ENST00000590096 NSUN5P1Q3KNT7 163 aa16.75■□□□□ 0.27
ATG4D-212ENST00000590096 KHDC1LQ5JSQ8 128 aa16.75■□□□□ 0.27
ATG4D-212ENST00000590096 TEX38Q6PEX7 206 aa16.75■□□□□ 0.27
ATG4D-212ENST00000590096 IDO2Q6ZQW0 420 aa16.75■□□□□ 0.27
ATG4D-212ENST00000590096 NDUFA11Q86Y39 141 aa16.75■□□□□ 0.27
ATG4D-212ENST00000590096 TOMM5Q8N4H5 51 aa16.75■□□□□ 0.27
ATG4D-212ENST00000590096 VSTM2AQ8TAG5 236 aa16.75■□□□□ 0.27
ATG4D-212ENST00000590096 ZFAND1Q8TCF1 268 aa16.75■□□□□ 0.27
ATG4D-212ENST00000590096 PRRT1Q99946 306 aa16.75■□□□□ 0.27
ATG4D-212ENST00000590096 WSB1Q9Y6I7 421 aa16.75■□□□□ 0.27
ATG4D-212ENST00000590096 TRAV41A0A0B4J266 112 aa16.74■□□□□ 0.27
ATG4D-212ENST00000590096 F2RP25116 425 aa16.74■□□□□ 0.27
ATG4D-212ENST00000590096 FAUP35544 74 aaKnown RBP16.74■□□□□ 0.27
ATG4D-212ENST00000590096 TMEM267Q0VDI3 215 aaPredicted RBP16.74■□□□□ 0.27
ATG4D-212ENST00000590096 PJVKQ0ZLH3 352 aa16.74■□□□□ 0.27
ATG4D-212ENST00000590096 FXYD3Q14802 87 aa16.74■□□□□ 0.27
ATG4D-212ENST00000590096 ECSCRQ19T08 205 aa16.74■□□□□ 0.27
ATG4D-212ENST00000590096 TCTEX1D1Q8N7M0 179 aa16.74■□□□□ 0.27
ATG4D-212ENST00000590096 ARPC1AQ92747 370 aa16.74■□□□□ 0.27
ATG4D-212ENST00000590096 TRIM63Q969Q1 353 aa16.74■□□□□ 0.27
ATG4D-212ENST00000590096 BATF3Q9NR55 127 aa16.74■□□□□ 0.27
ATG4D-212ENST00000590096 SLC2A9Q9NRM0 540 aa16.74■□□□□ 0.27
ATG4D-212ENST00000590096 MCUBQ9NWR8 336 aa16.74■□□□□ 0.27
ATG4D-212ENST00000590096 TSSC4Q9Y5U2 329 aaPredicted RBP16.74■□□□□ 0.27
ATG4D-212ENST00000590096 G3V318 75 aa16.73■□□□□ 0.27
ATG4D-212ENST00000590096 TAS2R31P59538 309 aa16.73■□□□□ 0.27
ATG4D-212ENST00000590096 PRSS8Q16651 343 aa16.73■□□□□ 0.27
ATG4D-212ENST00000590096 CNPY1Q3B7I2 92 aa16.73■□□□□ 0.27
ATG4D-212ENST00000590096 TCTEX1D4Q5JR98 221 aa16.73■□□□□ 0.27
ATG4D-212ENST00000590096 SSX9Q7RTT3 188 aa16.73■□□□□ 0.27
ATG4D-212ENST00000590096 TBC1D26Q86UD7 250 aa16.73■□□□□ 0.27
ATG4D-212ENST00000590096 VKORC1L1Q8N0U8 176 aa16.73■□□□□ 0.27
ATG4D-212ENST00000590096 OR51S1Q8NGJ8 323 aa16.73■□□□□ 0.27
ATG4D-212ENST00000590096 GRPEL2Q8TAA5 225 aa16.73■□□□□ 0.27
ATG4D-212ENST00000590096 RHOVQ96L33 236 aa16.73■□□□□ 0.27
ATG4D-212ENST00000590096 FAM103A1Q9BTL3 118 aaKnown RBP16.73■□□□□ 0.27
ATG4D-212ENST00000590096 SRRQ9GZT4 340 aa16.73■□□□□ 0.27
ATG4D-212ENST00000590096 PLEKHA2Q9HB19 425 aa16.73■□□□□ 0.27
ATG4D-212ENST00000590096 SCP2D1Q9UJQ7 156 aa16.73■□□□□ 0.27
ATG4D-212ENST00000590096 FBXO7Q9Y3I1 522 aa16.73■□□□□ 0.27
ATG4D-212ENST00000590096 ACTL6BO94805 426 aa16.72■□□□□ 0.27
ATG4D-212ENST00000590096 OR2A4O95047 310 aa16.72■□□□□ 0.27
ATG4D-212ENST00000590096 NQO2P16083 231 aa16.72■□□□□ 0.27
ATG4D-212ENST00000590096 CRIP2P52943 208 aaPredicted RBP16.72■□□□□ 0.27
ATG4D-212ENST00000590096 RND3P61587 244 aa16.72■□□□□ 0.27
ATG4D-212ENST00000590096 CFHR3Q02985 330 aa16.72■□□□□ 0.27
ATG4D-212ENST00000590096 TNXAQ16473 311 aa16.72■□□□□ 0.27
ATG4D-212ENST00000590096 CXorf66Q5JRM2 361 aaPredicted RBP16.72■□□□□ 0.27
ATG4D-212ENST00000590096 MMD2Q8IY49 270 aa16.72■□□□□ 0.27
ATG4D-212ENST00000590096 GDPD1Q8N9F7 314 aa16.72■□□□□ 0.27
ATG4D-212ENST00000590096 OR13C8Q8NGS7 320 aa16.72■□□□□ 0.27
ATG4D-212ENST00000590096 MARCH1Q8TCQ1 289 aa16.72■□□□□ 0.27
ATG4D-212ENST00000590096 OR2A7Q96R45 310 aa16.72■□□□□ 0.27
ATG4D-212ENST00000590096 COMMD9Q9P000 198 aa16.72■□□□□ 0.27
ATG4D-212ENST00000590096 COPZ2Q9P299 210 aa16.72■□□□□ 0.27
ATG4D-212ENST00000590096 A0A1W2PRX2 142 aa16.71■□□□□ 0.27
ATG4D-212ENST00000590096 ARPC1BO15143 372 aaKnown RBP16.71■□□□□ 0.27
ATG4D-212ENST00000590096 KBTBD11O94819 623 aa16.71■□□□□ 0.27
ATG4D-212ENST00000590096 S1PR2O95136 353 aa16.71■□□□□ 0.27
ATG4D-212ENST00000590096 IGHG4P01861 327 aa16.71■□□□□ 0.27
ATG4D-212ENST00000590096 ELANEP08246 267 aa16.71■□□□□ 0.27
ATG4D-212ENST00000590096 PI3P19957 117 aa16.71■□□□□ 0.27
ATG4D-212ENST00000590096 INPP1P49441 399 aa16.71■□□□□ 0.27
ATG4D-212ENST00000590096 PIGPP57054 158 aa16.71■□□□□ 0.27
ATG4D-212ENST00000590096 ERVK-16P61578 105 aa16.71■□□□□ 0.27
ATG4D-212ENST00000590096 FOXE3Q13461 319 aa16.71■□□□□ 0.27
ATG4D-212ENST00000590096 KLF9Q13886 244 aaPredicted RBP16.71■□□□□ 0.27
ATG4D-212ENST00000590096 PRR31Q5SQ13 230 aa16.71■□□□□ 0.27
ATG4D-212ENST00000590096 UNQ5815/PRO19632Q6UWF5 114 aa16.71■□□□□ 0.27
ATG4D-212ENST00000590096 PUSL1Q8N0Z8 303 aaKnown RBP16.71■□□□□ 0.27
ATG4D-212ENST00000590096 CCDC71LQ8N9Z2 235 aa16.71■□□□□ 0.27
ATG4D-212ENST00000590096 ZNF430Q9H8G1 570 aaPredicted RBP16.71■□□□□ 0.27
ATG4D-212ENST00000590096 SLC2A8Q9NY64 477 aa16.71■□□□□ 0.27
ATG4D-212ENST00000590096 C14orf166Q9Y224 244 aaKnown RBP16.71■□□□□ 0.27
ATG4D-212ENST00000590096 MPPED1O15442 326 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms