RNA–Protein interactions for RNA: ENST00000587988.5

SMARCA4-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 552 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-213ENST00000587988 M0QZK8 103 aa8.48□□□□□ -1.05
SMARCA4-213ENST00000587988 ARPC1BO15143 372 aaKnown RBP8.48□□□□□ -1.05
SMARCA4-213ENST00000587988 NDUFA7O95182 113 aa8.48□□□□□ -1.05
SMARCA4-213ENST00000587988 TCRBP04435 133 aa8.48□□□□□ -1.05
SMARCA4-213ENST00000587988 OR5AC1P0C628 307 aa8.48□□□□□ -1.05
SMARCA4-213ENST00000587988 SAA1P0DJI8 122 aaPredicted RBP8.48□□□□□ -1.05
SMARCA4-213ENST00000587988 RPA2P15927 270 aa8.48□□□□□ -1.05
SMARCA4-213ENST00000587988 SUPT4H1P63272 117 aaKnown RBP8.48□□□□□ -1.05
SMARCA4-213ENST00000587988 MRGPRG-AS1Q2M3A8 158 aa8.48□□□□□ -1.05
SMARCA4-213ENST00000587988 TMEM95Q3KNT9 176 aa8.48□□□□□ -1.05
SMARCA4-213ENST00000587988 MZT2BQ6NZ67 158 aa8.48□□□□□ -1.05
SMARCA4-213ENST00000587988 SSX9Q7RTT3 188 aa8.48□□□□□ -1.05
SMARCA4-213ENST00000587988 Q8N2B8 174 aa8.48□□□□□ -1.05
SMARCA4-213ENST00000587988 CD300LFQ8TDQ1 290 aa8.48□□□□□ -1.05
SMARCA4-213ENST00000587988 GLYATL2Q8WU03 294 aa8.48□□□□□ -1.05
SMARCA4-213ENST00000587988 HSPB9Q9BQS6 159 aa8.48□□□□□ -1.05
SMARCA4-213ENST00000587988 PRSS22Q9GZN4 317 aa8.48□□□□□ -1.05
SMARCA4-213ENST00000587988 RANBP3Q9H6Z4 567 aaPredicted RBP8.48□□□□□ -1.05
SMARCA4-213ENST00000587988 PLEKHA2Q9HB19 425 aa8.48□□□□□ -1.05
SMARCA4-213ENST00000587988 PRR13Q9NZ81 148 aa8.48□□□□□ -1.05
SMARCA4-213ENST00000587988 PLXNB1O43157 2135 aa8.47□□□□□ -1.05
SMARCA4-213ENST00000587988 FAM240BA0A1B0GVZ2 78 aa8.47□□□□□ -1.05
SMARCA4-213ENST00000587988 SPDEFO95238 335 aa8.47□□□□□ -1.05
SMARCA4-213ENST00000587988 HRASP01112 189 aa8.47□□□□□ -1.05
SMARCA4-213ENST00000587988 ANXA7P20073 488 aaKnown RBP8.47□□□□□ -1.05
SMARCA4-213ENST00000587988 MDKP21741 143 aaPredicted RBP8.47□□□□□ -1.05
SMARCA4-213ENST00000587988 UCP1P25874 307 aa8.47□□□□□ -1.05
SMARCA4-213ENST00000587988 G6PCP35575 357 aa8.47□□□□□ -1.05
SMARCA4-213ENST00000587988 RAG2P55895 527 aa8.47□□□□□ -1.05
SMARCA4-213ENST00000587988 TAS2R31P59538 309 aa8.47□□□□□ -1.05
SMARCA4-213ENST00000587988 UBE2KP61086 200 aa8.47□□□□□ -1.05
SMARCA4-213ENST00000587988 DHODHQ02127 395 aa8.47□□□□□ -1.05
SMARCA4-213ENST00000587988 PJVKQ0ZLH3 352 aa8.47□□□□□ -1.05
SMARCA4-213ENST00000587988 PLGLAQ15195 96 aa8.47□□□□□ -1.05
SMARCA4-213ENST00000587988 VMA21Q3ZAQ7 101 aa8.47□□□□□ -1.05
SMARCA4-213ENST00000587988 LIN54Q6MZP7 749 aa8.47□□□□□ -1.05
SMARCA4-213ENST00000587988 NRARPQ7Z6K4 114 aa8.47□□□□□ -1.05
SMARCA4-213ENST00000587988 SLC25A42Q86VD7 318 aa8.47□□□□□ -1.05
SMARCA4-213ENST00000587988 SGPP2Q8IWX5 399 aa8.47□□□□□ -1.05
SMARCA4-213ENST00000587988 PUSL1Q8N0Z8 303 aaKnown RBP8.47□□□□□ -1.05
SMARCA4-213ENST00000587988 CENPSQ8N2Z9 138 aa8.47□□□□□ -1.05
SMARCA4-213ENST00000587988 TCTEX1D1Q8N7M0 179 aa8.47□□□□□ -1.05
SMARCA4-213ENST00000587988 TEX45Q8NA69 505 aa8.47□□□□□ -1.05
SMARCA4-213ENST00000587988 LINC01006Q8NI28 216 aa8.47□□□□□ -1.05
SMARCA4-213ENST00000587988 R3HDM4Q96D70 268 aa8.47□□□□□ -1.05
SMARCA4-213ENST00000587988 RHOVQ96L33 236 aa8.47□□□□□ -1.05
SMARCA4-213ENST00000587988 C19orf24Q9BVV8 132 aa8.47□□□□□ -1.05
SMARCA4-213ENST00000587988 C20orf85Q9H1P6 137 aa8.47□□□□□ -1.05
SMARCA4-213ENST00000587988 C16orf95Q9H693 158 aa8.47□□□□□ -1.05
SMARCA4-213ENST00000587988 BEX1Q9HBH7 125 aa8.47□□□□□ -1.05
SMARCA4-213ENST00000587988 FAM212BQ9NTI7 297 aaPredicted RBP8.47□□□□□ -1.05
SMARCA4-213ENST00000587988 TRAV6A0A075B6T7 132 aa8.46□□□□□ -1.06
SMARCA4-213ENST00000587988 IGHV7-81A0A0B4J1V7 117 aa8.46□□□□□ -1.06
SMARCA4-213ENST00000587988 TRAV3A0A0B4J244 114 aa8.46□□□□□ -1.06
SMARCA4-213ENST00000587988 TMEM89A2RUT3 159 aa8.46□□□□□ -1.06
SMARCA4-213ENST00000587988 CA2P00918 260 aa8.46□□□□□ -1.06
SMARCA4-213ENST00000587988 KRASP01116 189 aa8.46□□□□□ -1.06
SMARCA4-213ENST00000587988 IGHG2P01859 326 aa8.46□□□□□ -1.06
SMARCA4-213ENST00000587988 HLA-DRB1P01911 266 aa8.46□□□□□ -1.06
SMARCA4-213ENST00000587988 IL6RP08887 468 aaPredicted RBP8.46□□□□□ -1.06
SMARCA4-213ENST00000587988 NQO2P16083 231 aa8.46□□□□□ -1.06
SMARCA4-213ENST00000587988 SSBP2P81877 361 aaPredicted RBP8.46□□□□□ -1.06
SMARCA4-213ENST00000587988 PPP1R1AQ13522 171 aa8.46□□□□□ -1.06
SMARCA4-213ENST00000587988 TMEM187Q14656 261 aa8.46□□□□□ -1.06
SMARCA4-213ENST00000587988 POU2AF1Q16633 256 aa8.46□□□□□ -1.06
SMARCA4-213ENST00000587988 TMEM128Q5BJH2 165 aa8.46□□□□□ -1.06
SMARCA4-213ENST00000587988 OR4A47Q6IF82 309 aa8.46□□□□□ -1.06
SMARCA4-213ENST00000587988 PPP1R27Q86WC6 154 aa8.46□□□□□ -1.06
SMARCA4-213ENST00000587988 LHFPL5Q8TAF8 219 aa8.46□□□□□ -1.06
SMARCA4-213ENST00000587988 TMEM158Q8WZ71 300 aa8.46□□□□□ -1.06
SMARCA4-213ENST00000587988 GALNT14Q96FL9 552 aa8.46□□□□□ -1.06
SMARCA4-213ENST00000587988 SEC22AQ96IW7 307 aa8.46□□□□□ -1.06
SMARCA4-213ENST00000587988 MDFIQ99750 246 aa8.46□□□□□ -1.06
SMARCA4-213ENST00000587988 TMEM222Q9H0R3 208 aa8.46□□□□□ -1.06
SMARCA4-213ENST00000587988 SERTAD4Q9NUC0 356 aa8.46□□□□□ -1.06
SMARCA4-213ENST00000587988 COMMD9Q9P000 198 aa8.46□□□□□ -1.06
SMARCA4-213ENST00000587988 LINC00527Q9UJ94 153 aa8.46□□□□□ -1.06
SMARCA4-213ENST00000587988 MARCH11A6NNE9 402 aa8.45□□□□□ -1.06
SMARCA4-213ENST00000587988 KBTBD11O94819 623 aa8.45□□□□□ -1.06
SMARCA4-213ENST00000587988 OR2A4O95047 310 aa8.45□□□□□ -1.06
SMARCA4-213ENST00000587988 SFT2D2O95562 160 aa8.45□□□□□ -1.06
SMARCA4-213ENST00000587988 CDS2O95674 445 aa8.45□□□□□ -1.06
SMARCA4-213ENST00000587988 SERPINE2P07093 398 aa8.45□□□□□ -1.06
SMARCA4-213ENST00000587988 SPNP16150 400 aa8.45□□□□□ -1.06
SMARCA4-213ENST00000587988 VDAC2P45880 294 aaPredicted RBP8.45□□□□□ -1.06
SMARCA4-213ENST00000587988 DEFA1P59665 94 aa8.45□□□□□ -1.06
SMARCA4-213ENST00000587988 DEFA3P59666 94 aa8.45□□□□□ -1.06
SMARCA4-213ENST00000587988 CX3CL1P78423 397 aa8.45□□□□□ -1.06
SMARCA4-213ENST00000587988 NDPQ00604 133 aa8.45□□□□□ -1.06
SMARCA4-213ENST00000587988 PRSS8Q16651 343 aa8.45□□□□□ -1.06
SMARCA4-213ENST00000587988 TRIM16LQ309B1 348 aa8.45□□□□□ -1.06
SMARCA4-213ENST00000587988 SLC35E3Q7Z769 313 aa8.45□□□□□ -1.06
SMARCA4-213ENST00000587988 SELENOHQ8IZQ5 122 aaKnown RBP8.45□□□□□ -1.06
SMARCA4-213ENST00000587988 DUSP18Q8NEJ0 188 aa8.45□□□□□ -1.06
SMARCA4-213ENST00000587988 DMBX1Q8NFW5 382 aa8.45□□□□□ -1.06
SMARCA4-213ENST00000587988 OR4F5Q8NH21 305 aa8.45□□□□□ -1.06
SMARCA4-213ENST00000587988 OR2T6Q8NHC8 308 aa8.45□□□□□ -1.06
SMARCA4-213ENST00000587988 ENKURQ8TC29 256 aa8.45□□□□□ -1.06
SMARCA4-213ENST00000587988 NOL4LQ96MY1 436 aaPredicted RBP8.45□□□□□ -1.06
SMARCA4-213ENST00000587988 OR2A7Q96R45 310 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms