RNA–Protein interactions for RNA: ENST00000586558.5

DDX39A-204, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 1,127 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-204ENST00000586558 RAMP3O60896 148 aa15.17■□□□□ 0.02
DDX39A-204ENST00000586558 HPRT1P00492 218 aa15.17■□□□□ 0.02
DDX39A-204ENST00000586558 HRASP01112 189 aa15.17■□□□□ 0.02
DDX39A-204ENST00000586558 PIGPP57054 158 aa15.17■□□□□ 0.02
DDX39A-204ENST00000586558 FOXRED2Q8IWF2 684 aa15.17■□□□□ 0.02
DDX39A-204ENST00000586558 TEX45Q8NA69 505 aa15.17■□□□□ 0.02
DDX39A-204ENST00000586558 COMMD9Q9P000 198 aa15.17■□□□□ 0.02
DDX39A-204ENST00000586558 COPZ2Q9P299 210 aa15.17■□□□□ 0.02
DDX39A-204ENST00000586558 GPR132Q9UNW8 380 aa15.17■□□□□ 0.02
DDX39A-204ENST00000586558 TENM1Q9UKZ4 2725 aa15.16■□□□□ 0.02
DDX39A-204ENST00000586558 SRRM4A7MD48 611 aaKnown RBP15.16■□□□□ 0.02
DDX39A-204ENST00000586558 AP4M1O00189 453 aa15.16■□□□□ 0.02
DDX39A-204ENST00000586558 CREBL2O60519 120 aaPredicted RBP15.16■□□□□ 0.02
DDX39A-204ENST00000586558 B3GALNT1O75752 331 aa15.16■□□□□ 0.02
DDX39A-204ENST00000586558 PI3P19957 117 aa15.16■□□□□ 0.02
DDX39A-204ENST00000586558 TAS2R31P59538 309 aa15.16■□□□□ 0.02
DDX39A-204ENST00000586558 PPP1R27Q86WC6 154 aa15.16■□□□□ 0.02
DDX39A-204ENST00000586558 SPATA3Q8NHX4 192 aa15.16■□□□□ 0.02
DDX39A-204ENST00000586558 VSTM2AQ8TAG5 236 aa15.16■□□□□ 0.02
DDX39A-204ENST00000586558 WFDC12Q8WWY7 111 aa15.16■□□□□ 0.02
DDX39A-204ENST00000586558 RHOVQ96L33 236 aa15.16■□□□□ 0.02
DDX39A-204ENST00000586558 SLC25A21Q9BQT8 299 aaPredicted RBP15.16■□□□□ 0.02
DDX39A-204ENST00000586558 WNT10AQ9GZT5 417 aa15.16■□□□□ 0.02
DDX39A-204ENST00000586558 ZNF580Q9UK33 172 aa15.16■□□□□ 0.02
DDX39A-204ENST00000586558 CRYGBP07316 175 aa15.15■□□□□ 0.02
DDX39A-204ENST00000586558 VSIG10L2P0DP72 767 aa15.15■□□□□ 0.02
DDX39A-204ENST00000586558 TMEM95Q3KNT9 176 aa15.15■□□□□ 0.02
DDX39A-204ENST00000586558 KLHDC1Q8N7A1 406 aa15.15■□□□□ 0.02
DDX39A-204ENST00000586558 C3orf56Q8N813 242 aa15.15■□□□□ 0.02
DDX39A-204ENST00000586558 HSPB9Q9BQS6 159 aa15.15■□□□□ 0.02
DDX39A-204ENST00000586558 RTBDNQ9BSG5 229 aaPredicted RBP15.15■□□□□ 0.02
DDX39A-204ENST00000586558 IGHV7-81A0A0B4J1V7 117 aa15.14■□□□□ 0.01
DDX39A-204ENST00000586558 H0Y980 276 aa15.14■□□□□ 0.01
DDX39A-204ENST00000586558 SAA1P0DJI8 122 aaPredicted RBP15.14■□□□□ 0.01
DDX39A-204ENST00000586558 NQO2P16083 231 aa15.14■□□□□ 0.01
DDX39A-204ENST00000586558 CX3CL1P78423 397 aa15.14■□□□□ 0.01
DDX39A-204ENST00000586558 POU2AF1Q16633 256 aa15.14■□□□□ 0.01
DDX39A-204ENST00000586558 ZNF562Q6V9R5 426 aa15.14■□□□□ 0.01
DDX39A-204ENST00000586558 CHPT1Q8WUD6 406 aa15.14■□□□□ 0.01
DDX39A-204ENST00000586558 ZNF747Q9BV97 191 aa15.14■□□□□ 0.01
DDX39A-204ENST00000586558 GON7Q9BXV9 100 aa15.14■□□□□ 0.01
DDX39A-204ENST00000586558 OR51J1Q9H342 316 aa15.14■□□□□ 0.01
DDX39A-204ENST00000586558 C5orf66Q9H5L9 145 aa15.14■□□□□ 0.01
DDX39A-204ENST00000586558 TPSG1Q9NRR2 321 aa15.14■□□□□ 0.01
DDX39A-204ENST00000586558 S1PR2O95136 353 aa15.13■□□□□ 0.01
DDX39A-204ENST00000586558 IGF1P05019 195 aa15.13■□□□□ 0.01
DDX39A-204ENST00000586558 SERPINE2P07093 398 aa15.13■□□□□ 0.01
DDX39A-204ENST00000586558 RPA2P15927 270 aa15.13■□□□□ 0.01
DDX39A-204ENST00000586558 LPAR6P43657 344 aa15.13■□□□□ 0.01
DDX39A-204ENST00000586558 RBMS2Q15434 407 aaKnown RBP15.13■□□□□ 0.01
DDX39A-204ENST00000586558 ZNF585BQ52M93 769 aa15.13■□□□□ 0.01
DDX39A-204ENST00000586558 CADM3Q8N126 398 aa15.13■□□□□ 0.01
DDX39A-204ENST00000586558 VSIG4Q9Y279 399 aa15.13■□□□□ 0.01
DDX39A-204ENST00000586558 TEX13DA0A0J9YY54 714 aaPredicted RBP15.12■□□□□ 0.01
DDX39A-204ENST00000586558 C3orf85A0A1B0GTC6 90 aa15.12■□□□□ 0.01
DDX39A-204ENST00000586558 LINC00854A0A1B0GVQ3 168 aa15.12■□□□□ 0.01
DDX39A-204ENST00000586558 HAX1O00165 279 aa15.12■□□□□ 0.01
DDX39A-204ENST00000586558 FCN1O00602 326 aa15.12■□□□□ 0.01
DDX39A-204ENST00000586558 OR2A4O95047 310 aa15.12■□□□□ 0.01
DDX39A-204ENST00000586558 CA2P00918 260 aa15.12■□□□□ 0.01
DDX39A-204ENST00000586558 ERVK-16P61578 105 aa15.12■□□□□ 0.01
DDX39A-204ENST00000586558 PRSS8Q16651 343 aa15.12■□□□□ 0.01
DDX39A-204ENST00000586558 MMD2Q8IY49 270 aa15.12■□□□□ 0.01
DDX39A-204ENST00000586558 PUSL1Q8N0Z8 303 aaKnown RBP15.12■□□□□ 0.01
DDX39A-204ENST00000586558 OR4A5Q8NH83 315 aa15.12■□□□□ 0.01
DDX39A-204ENST00000586558 TMEM167AQ8TBQ9 72 aa15.12■□□□□ 0.01
DDX39A-204ENST00000586558 WIPF2Q8TF74 440 aaPredicted RBP15.12■□□□□ 0.01
DDX39A-204ENST00000586558 R3HDM4Q96D70 268 aa15.12■□□□□ 0.01
DDX39A-204ENST00000586558 OR2A7Q96R45 310 aa15.12■□□□□ 0.01
DDX39A-204ENST00000586558 CRYM-AS1A6NIL9 109 aa15.11■□□□□ 0.01
DDX39A-204ENST00000586558 PLA2G10O15496 165 aa15.11■□□□□ 0.01
DDX39A-204ENST00000586558 LYRM1O43325 122 aa15.11■□□□□ 0.01
DDX39A-204ENST00000586558 UPK1BO75841 260 aa15.11■□□□□ 0.01
DDX39A-204ENST00000586558 KBTBD11O94819 623 aa15.11■□□□□ 0.01
DDX39A-204ENST00000586558 FGF2P09038 288 aa15.11■□□□□ 0.01
DDX39A-204ENST00000586558 SHISA2Q6UWI4 295 aa15.11■□□□□ 0.01
DDX39A-204ENST00000586558 CENPVQ7Z7K6 275 aaPredicted RBP15.11■□□□□ 0.01
DDX39A-204ENST00000586558 VKORC1L1Q8N0U8 176 aa15.11■□□□□ 0.01
DDX39A-204ENST00000586558 STPG2Q8N412 459 aa15.11■□□□□ 0.01
DDX39A-204ENST00000586558 CLCC1Q96S66 551 aa15.11■□□□□ 0.01
DDX39A-204ENST00000586558 NAA60Q9H7X0 242 aa15.11■□□□□ 0.01
DDX39A-204ENST00000586558 PARP11Q9NR21 331 aa15.11■□□□□ 0.01
DDX39A-204ENST00000586558 BET1LQ9NYM9 111 aa15.11■□□□□ 0.01
DDX39A-204ENST00000586558 LINC01548A6NM66 108 aa15.1■□□□□ 0.01
DDX39A-204ENST00000586558 MARCH11A6NNE9 402 aa15.1■□□□□ 0.01
DDX39A-204ENST00000586558 ATP6V0E1O15342 81 aa15.1■□□□□ 0.01
DDX39A-204ENST00000586558 NDUFB6O95139 128 aa15.1■□□□□ 0.01
DDX39A-204ENST00000586558 CRIP2P52943 208 aaPredicted RBP15.1■□□□□ 0.01
DDX39A-204ENST00000586558 SLC35B1P78383 322 aa15.1■□□□□ 0.01
DDX39A-204ENST00000586558 NDPQ00604 133 aa15.1■□□□□ 0.01
DDX39A-204ENST00000586558 PJVKQ0ZLH3 352 aa15.1■□□□□ 0.01
DDX39A-204ENST00000586558 OR4A47Q6IF82 309 aa15.1■□□□□ 0.01
DDX39A-204ENST00000586558 SSX9Q7RTT3 188 aa15.1■□□□□ 0.01
DDX39A-204ENST00000586558 SGPP2Q8IWX5 399 aa15.1■□□□□ 0.01
DDX39A-204ENST00000586558 DMBX1Q8NFW5 382 aa15.1■□□□□ 0.01
DDX39A-204ENST00000586558 ARPC1AQ92747 370 aa15.1■□□□□ 0.01
DDX39A-204ENST00000586558 NOL4LQ96MY1 436 aaPredicted RBP15.1■□□□□ 0.01
DDX39A-204ENST00000586558 TP53RKQ96S44 253 aa15.1■□□□□ 0.01
DDX39A-204ENST00000586558 ZNF430Q9H8G1 570 aaPredicted RBP15.1■□□□□ 0.01
DDX39A-204ENST00000586558 PSMB11A5LHX3 300 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms