RNA–Protein interactions for RNA: ENST00000585395.6

LSM7-202, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM7, Length 621 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-202ENST00000585395 CNTFRP26992 372 aa18.25■□□□□ 0.51
LSM7-202ENST00000585395 RPL30P62888 115 aaKnown RBP18.25■□□□□ 0.51
LSM7-202ENST00000585395 SLC35B1P78383 322 aa18.25■□□□□ 0.51
LSM7-202ENST00000585395 SURF2Q15527 256 aaPredicted RBP18.25■□□□□ 0.51
LSM7-202ENST00000585395 NDUFA11Q86Y39 141 aa18.25■□□□□ 0.51
LSM7-202ENST00000585395 SPAG16Q8N0X2 631 aa18.25■□□□□ 0.51
LSM7-202ENST00000585395 CCDC71LQ8N9Z2 235 aa18.25■□□□□ 0.51
LSM7-202ENST00000585395 VSTM2AQ8TAG5 236 aa18.25■□□□□ 0.51
LSM7-202ENST00000585395 CHPT1Q8WUD6 406 aa18.25■□□□□ 0.51
LSM7-202ENST00000585395 TRIM63Q969Q1 353 aa18.25■□□□□ 0.51
LSM7-202ENST00000585395 RITA1Q96K30 269 aa18.25■□□□□ 0.51
LSM7-202ENST00000585395 CITED2Q99967 270 aaPredicted RBP18.25■□□□□ 0.51
LSM7-202ENST00000585395 FBXL15Q9H469 300 aa18.25■□□□□ 0.51
LSM7-202ENST00000585395 MCUBQ9NWR8 336 aa18.25■□□□□ 0.51
LSM7-202ENST00000585395 KMT2CQ8NEZ4 4911 aaKnown RBP18.24■□□□□ 0.51
LSM7-202ENST00000585395 PGLYRP1O75594 196 aaPredicted RBP18.24■□□□□ 0.51
LSM7-202ENST00000585395 OR2B11Q5JQS5 317 aa18.24■□□□□ 0.51
LSM7-202ENST00000585395 ZNF57Q68EA5 555 aaPredicted RBP18.24■□□□□ 0.51
LSM7-202ENST00000585395 C1QL4Q86Z23 238 aa18.24■□□□□ 0.51
LSM7-202ENST00000585395 OR4D10Q8NGI6 311 aa18.24■□□□□ 0.51
LSM7-202ENST00000585395 OR51H1Q8NH63 302 aa18.24■□□□□ 0.51
LSM7-202ENST00000585395 SLC2A8Q9NY64 477 aa18.24■□□□□ 0.51
LSM7-202ENST00000585395 C14orf166Q9Y224 244 aaKnown RBP18.24■□□□□ 0.51
LSM7-202ENST00000585395 A0A1W2PRX2 142 aa18.23■□□□□ 0.51
LSM7-202ENST00000585395 SLC25A17O43808 307 aa18.23■□□□□ 0.51
LSM7-202ENST00000585395 OPN1MWP04001 364 aa18.23■□□□□ 0.51
LSM7-202ENST00000585395 RLN1P04808 185 aa18.23■□□□□ 0.51
LSM7-202ENST00000585395 OPN1MW2P0DN77 364 aa18.23■□□□□ 0.51
LSM7-202ENST00000585395 OPN1MW3P0DN78 364 aa18.23■□□□□ 0.51
LSM7-202ENST00000585395 PPP5CP53041 499 aa18.23■□□□□ 0.51
LSM7-202ENST00000585395 UBE2KP61086 200 aa18.23■□□□□ 0.51
LSM7-202ENST00000585395 PHLDA2Q53GA4 152 aa18.23■□□□□ 0.51
LSM7-202ENST00000585395 TEX45Q8NA69 505 aa18.23■□□□□ 0.51
LSM7-202ENST00000585395 TCRBV4S1A1TA0A5B7 111 aa18.22■□□□□ 0.51
LSM7-202ENST00000585395 HPRT1P00492 218 aa18.22■□□□□ 0.51
LSM7-202ENST00000585395 ZNF735P0CB33 412 aa18.22■□□□□ 0.51
LSM7-202ENST00000585395 KLF9Q13886 244 aaPredicted RBP18.22■□□□□ 0.51
LSM7-202ENST00000585395 PPP1R27Q86WC6 154 aa18.22■□□□□ 0.51
LSM7-202ENST00000585395 OR4F17Q8NGA8 305 aa18.22■□□□□ 0.51
LSM7-202ENST00000585395 R3HDM4Q96D70 268 aa18.22■□□□□ 0.51
LSM7-202ENST00000585395 OR4F4Q96R69 305 aa18.22■□□□□ 0.51
LSM7-202ENST00000585395 FAM212BQ9NTI7 297 aaPredicted RBP18.22■□□□□ 0.51
LSM7-202ENST00000585395 COPZ2Q9P299 210 aa18.22■□□□□ 0.51
LSM7-202ENST00000585395 ZNF580Q9UK33 172 aa18.22■□□□□ 0.51
LSM7-202ENST00000585395 PSMB11A5LHX3 300 aa18.21■□□□□ 0.51
LSM7-202ENST00000585395 CENPXA8MT69 81 aa18.21■□□□□ 0.51
LSM7-202ENST00000585395 VDAC1P21796 283 aa18.21■□□□□ 0.51
LSM7-202ENST00000585395 F2RP25116 425 aa18.21■□□□□ 0.51
LSM7-202ENST00000585395 RND3P61587 244 aa18.21■□□□□ 0.51
LSM7-202ENST00000585395 FAAP20Q6NZ36 180 aa18.21■□□□□ 0.51
LSM7-202ENST00000585395 IDO2Q6ZQW0 420 aa18.21■□□□□ 0.51
LSM7-202ENST00000585395 OR51S1Q8NGJ8 323 aa18.21■□□□□ 0.51
LSM7-202ENST00000585395 OR51J1Q9H342 316 aa18.21■□□□□ 0.51
LSM7-202ENST00000585395 PLEKHA2Q9HB19 425 aa18.21■□□□□ 0.51
LSM7-202ENST00000585395 SLC2A9Q9NRM0 540 aa18.21■□□□□ 0.51
LSM7-202ENST00000585395 COMMD9Q9P000 198 aa18.21■□□□□ 0.51
LSM7-202ENST00000585395 NAP1L6A6NFF2 107 aa18.2■□□□□ 0.5
LSM7-202ENST00000585395 IGLV2-23P01705 113 aa18.2■□□□□ 0.5
LSM7-202ENST00000585395 CTSDP07339 412 aaPredicted RBP18.2■□□□□ 0.5
LSM7-202ENST00000585395 PF4V1P10720 104 aa18.2■□□□□ 0.5
LSM7-202ENST00000585395 NQO2P16083 231 aa18.2■□□□□ 0.5
LSM7-202ENST00000585395 TAS2R31P59538 309 aa18.2■□□□□ 0.5
LSM7-202ENST00000585395 ERVK-16P61578 105 aa18.2■□□□□ 0.5
LSM7-202ENST00000585395 ZNF562Q6V9R5 426 aa18.2■□□□□ 0.5
LSM7-202ENST00000585395 TBC1D26Q86UD7 250 aa18.2■□□□□ 0.5
LSM7-202ENST00000585395 COMMD1Q8N668 190 aa18.2■□□□□ 0.5
LSM7-202ENST00000585395 ABHD5Q8WTS1 349 aa18.2■□□□□ 0.5
LSM7-202ENST00000585395 GPHA2Q96T91 129 aa18.2■□□□□ 0.5
LSM7-202ENST00000585395 HRASLSQ9HDD0 168 aa18.2■□□□□ 0.5
LSM7-202ENST00000585395 B3GALNT1O75752 331 aa18.19■□□□□ 0.5
LSM7-202ENST00000585395 ACTL6BO94805 426 aa18.19■□□□□ 0.5
LSM7-202ENST00000585395 IGF1P05019 195 aa18.19■□□□□ 0.5
LSM7-202ENST00000585395 PIGPP57054 158 aa18.19■□□□□ 0.5
LSM7-202ENST00000585395 TMEM267Q0VDI3 215 aaPredicted RBP18.19■□□□□ 0.5
LSM7-202ENST00000585395 STPG2Q8N412 459 aa18.19■□□□□ 0.5
LSM7-202ENST00000585395 OR13C8Q8NGS7 320 aa18.19■□□□□ 0.5
LSM7-202ENST00000585395 MARCH1Q8TCQ1 289 aa18.19■□□□□ 0.5
LSM7-202ENST00000585395 WIPF2Q8TF74 440 aaPredicted RBP18.19■□□□□ 0.5
LSM7-202ENST00000585395 RBMXL1Q96E39 390 aaKnown RBP18.19■□□□□ 0.5
LSM7-202ENST00000585395 CLCC1Q96S66 551 aa18.19■□□□□ 0.5
LSM7-202ENST00000585395 HSPB9Q9BQS6 159 aa18.19■□□□□ 0.5
LSM7-202ENST00000585395 C7orf50Q9BRJ6 194 aaKnown RBP18.19■□□□□ 0.5
LSM7-202ENST00000585395 WDR12Q9GZL7 423 aaKnown RBP18.19■□□□□ 0.5
LSM7-202ENST00000585395 PARP11Q9NR21 331 aa18.19■□□□□ 0.5
LSM7-202ENST00000585395 IGHV7-81A0A0B4J1V7 117 aa18.18■□□□□ 0.5
LSM7-202ENST00000585395 CNIH1O95406 144 aa18.18■□□□□ 0.5
LSM7-202ENST00000585395 CA2P00918 260 aa18.18■□□□□ 0.5
LSM7-202ENST00000585395 CX3CL1P78423 397 aa18.18■□□□□ 0.5
LSM7-202ENST00000585395 MMD2Q8IY49 270 aa18.18■□□□□ 0.5
LSM7-202ENST00000585395 RHOVQ96L33 236 aa18.18■□□□□ 0.5
LSM7-202ENST00000585395 NOL4LQ96MY1 436 aaPredicted RBP18.18■□□□□ 0.5
LSM7-202ENST00000585395 CCDC32Q9BV29 185 aa18.18■□□□□ 0.5
LSM7-202ENST00000585395 AKIP1Q9NQ31 210 aa18.18■□□□□ 0.5
LSM7-202ENST00000585395 TSSC4Q9Y5U2 329 aaPredicted RBP18.18■□□□□ 0.5
LSM7-202ENST00000585395 MPPED1O15442 326 aa18.17■□□□□ 0.5
LSM7-202ENST00000585395 ATG12O94817 140 aa18.17■□□□□ 0.5
LSM7-202ENST00000585395 OR2A4O95047 310 aa18.17■□□□□ 0.5
LSM7-202ENST00000585395 CRYGBP07316 175 aa18.17■□□□□ 0.5
LSM7-202ENST00000585395 SAA1P0DJI8 122 aaPredicted RBP18.17■□□□□ 0.5
LSM7-202ENST00000585395 CD83Q01151 205 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms