RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-231ENST00000584063 OR5R1Q8NH85 324 aa9.8□□□□□ -0.84
CDK5RAP3-231ENST00000584063 RDH5Q92781 318 aa9.8□□□□□ -0.84
CDK5RAP3-231ENST00000584063 GINS3Q9BRX5 216 aa9.8□□□□□ -0.84
CDK5RAP3-231ENST00000584063 RBFOX3A6NFN3 312 aa9.79□□□□□ -0.84
CDK5RAP3-231ENST00000584063 K7EN84 100 aa9.79□□□□□ -0.84
CDK5RAP3-231ENST00000584063 RS1O15537 224 aa9.79□□□□□ -0.84
CDK5RAP3-231ENST00000584063 CHST1O43916 411 aa9.79□□□□□ -0.84
CDK5RAP3-231ENST00000584063 GATA3P23771 443 aa9.79□□□□□ -0.84
CDK5RAP3-231ENST00000584063 CHRNB4P30926 498 aa9.79□□□□□ -0.84
CDK5RAP3-231ENST00000584063 HOXA4Q00056 320 aaPredicted RBP9.79□□□□□ -0.84
CDK5RAP3-231ENST00000584063 RAB35Q15286 201 aa9.79□□□□□ -0.84
CDK5RAP3-231ENST00000584063 MPV17LQ2QL34 196 aa9.79□□□□□ -0.84
CDK5RAP3-231ENST00000584063 OR1J1Q8NGS3 322 aa9.79□□□□□ -0.84
CDK5RAP3-231ENST00000584063 Q8WTZ3 238 aa9.79□□□□□ -0.84
CDK5RAP3-231ENST00000584063 QTRT1Q9BXR0 403 aaKnown RBP9.79□□□□□ -0.84
CDK5RAP3-231ENST00000584063 OR2H1Q9GZK4 316 aa9.79□□□□□ -0.84
CDK5RAP3-231ENST00000584063 PIEZO1Q92508 2521 aa9.79□□□□□ -0.84
CDK5RAP3-231ENST00000584063 SMG1Q96Q15 3661 aaKnown RBP9.79□□□□□ -0.84
CDK5RAP3-231ENST00000584063 RELNP78509 3460 aa9.79□□□□□ -0.84
CDK5RAP3-231ENST00000584063 SP1P08047 785 aa9.79□□□□□ -0.84
CDK5RAP3-231ENST00000584063 IAPPP10997 89 aa9.79□□□□□ -0.84
CDK5RAP3-231ENST00000584063 HOXA5P20719 270 aa9.79□□□□□ -0.84
CDK5RAP3-231ENST00000584063 FKBP2P26885 142 aaKnown RBP9.79□□□□□ -0.84
CDK5RAP3-231ENST00000584063 DLK1P80370 383 aa9.79□□□□□ -0.84
CDK5RAP3-231ENST00000584063 LCN15Q6UWW0 184 aa9.79□□□□□ -0.84
CDK5RAP3-231ENST00000584063 VSIRQ9H7M9 311 aa9.79□□□□□ -0.84
CDK5RAP3-231ENST00000584063 Q9N2K0 584 aa9.79□□□□□ -0.84
CDK5RAP3-231ENST00000584063 GNG13Q9P2W3 67 aa9.79□□□□□ -0.84
CDK5RAP3-231ENST00000584063 USF3Q68DE3 2245 aa9.78□□□□□ -0.84
CDK5RAP3-231ENST00000584063 A0A0G2JRQ6 117 aa9.78□□□□□ -0.84
CDK5RAP3-231ENST00000584063 MMP9P14780 707 aa9.78□□□□□ -0.84
CDK5RAP3-231ENST00000584063 UCNP55089 124 aa9.78□□□□□ -0.84
CDK5RAP3-231ENST00000584063 MUC15Q8N387 334 aa9.78□□□□□ -0.84
CDK5RAP3-231ENST00000584063 TMEM252Q8N6L7 170 aa9.78□□□□□ -0.84
CDK5RAP3-231ENST00000584063 ZNF703Q9H7S9 590 aaPredicted RBP9.78□□□□□ -0.84
CDK5RAP3-231ENST00000584063 SRD5A3Q9H8P0 318 aa9.78□□□□□ -0.84
CDK5RAP3-231ENST00000584063 GPR35Q9HC97 309 aa9.78□□□□□ -0.84
CDK5RAP3-231ENST00000584063 ATRXP46100 2492 aa9.78□□□□□ -0.84
CDK5RAP3-231ENST00000584063 KIAA1549Q9HCM3 1950 aa9.78□□□□□ -0.84
CDK5RAP3-231ENST00000584063 K7N7A8 449 aa9.78□□□□□ -0.84
CDK5RAP3-231ENST00000584063 LILRA1O75019 489 aa9.78□□□□□ -0.84
CDK5RAP3-231ENST00000584063 TRGC2P03986 189 aa9.78□□□□□ -0.84
CDK5RAP3-231ENST00000584063 PRDX2P32119 198 aa9.78□□□□□ -0.84
CDK5RAP3-231ENST00000584063 BATFQ16520 125 aa9.78□□□□□ -0.84
CDK5RAP3-231ENST00000584063 SPSB3Q6PJ21 355 aa9.78□□□□□ -0.84
CDK5RAP3-231ENST00000584063 NUFIP2Q7Z417 695 aaKnown RBP9.78□□□□□ -0.84
CDK5RAP3-231ENST00000584063 OR1P1Q8NH06 330 aa9.78□□□□□ -0.84
CDK5RAP3-231ENST00000584063 ADGRG7Q96K78 797 aa9.78□□□□□ -0.84
CDK5RAP3-231ENST00000584063 JMJD8Q96S16 334 aa9.78□□□□□ -0.84
CDK5RAP3-231ENST00000584063 SYT3Q9BQG1 590 aa9.78□□□□□ -0.84
CDK5RAP3-231ENST00000584063 PBDC1Q9BVG4 233 aa9.78□□□□□ -0.84
CDK5RAP3-231ENST00000584063 DOK5Q9P104 306 aa9.78□□□□□ -0.84
CDK5RAP3-231ENST00000584063 MED12LQ86YW9 2145 aa9.78□□□□□ -0.84
CDK5RAP3-231ENST00000584063 SMCO3A2RU48 225 aa9.77□□□□□ -0.84
CDK5RAP3-231ENST00000584063 OR6C6A6NF89 314 aa9.77□□□□□ -0.84
CDK5RAP3-231ENST00000584063 CORTO00230 105 aa9.77□□□□□ -0.84
CDK5RAP3-231ENST00000584063 ENSAO43768 121 aaKnown RBP9.77□□□□□ -0.84
CDK5RAP3-231ENST00000584063 PDCD6O75340 191 aa9.77□□□□□ -0.84
CDK5RAP3-231ENST00000584063 SMAGPQ0VAQ4 97 aa9.77□□□□□ -0.84
CDK5RAP3-231ENST00000584063 C20orf204Q6ZNR8 217 aa9.77□□□□□ -0.84
CDK5RAP3-231ENST00000584063 SLC35E3Q7Z769 313 aa9.77□□□□□ -0.84
CDK5RAP3-231ENST00000584063 ZNF429Q86V71 674 aa9.77□□□□□ -0.84
CDK5RAP3-231ENST00000584063 ODF3L1Q8IXM7 274 aa9.77□□□□□ -0.84
CDK5RAP3-231ENST00000584063 OR1L4Q8NGR5 311 aa9.77□□□□□ -0.84
CDK5RAP3-231ENST00000584063 ORAOV1Q8WV07 137 aa9.77□□□□□ -0.84
CDK5RAP3-231ENST00000584063 MOB3AQ96BX8 217 aa9.77□□□□□ -0.84
CDK5RAP3-231ENST00000584063 CGB1A6NKQ9 187 aa9.77□□□□□ -0.85
CDK5RAP3-231ENST00000584063 FAM90A27PA6NNH2 459 aa9.77□□□□□ -0.85
CDK5RAP3-231ENST00000584063 WISP2O76076 250 aa9.77□□□□□ -0.85
CDK5RAP3-231ENST00000584063 NGFP01138 241 aa9.77□□□□□ -0.85
CDK5RAP3-231ENST00000584063 RPL29P47914 159 aaKnown RBP9.77□□□□□ -0.85
CDK5RAP3-231ENST00000584063 PAX9P55771 341 aa9.77□□□□□ -0.85
CDK5RAP3-231ENST00000584063 HERPUD1Q15011 391 aa9.77□□□□□ -0.85
CDK5RAP3-231ENST00000584063 EFNB3Q15768 340 aa9.77□□□□□ -0.85
CDK5RAP3-231ENST00000584063 ZNF787Q6DD87 383 aa9.77□□□□□ -0.85
CDK5RAP3-231ENST00000584063 GALNT14Q96FL9 552 aa9.77□□□□□ -0.85
CDK5RAP3-231ENST00000584063 DLL3Q9NYJ7 618 aa9.77□□□□□ -0.85
CDK5RAP3-231ENST00000584063 SLC25A10Q9UBX3 287 aaPredicted RBP9.77□□□□□ -0.85
CDK5RAP3-231ENST00000584063 ADGRG4Q8IZF6 3080 aa9.77□□□□□ -0.85
CDK5RAP3-231ENST00000584063 SYNGR1O43759 233 aa9.76□□□□□ -0.85
CDK5RAP3-231ENST00000584063 AMBPP02760 352 aa9.76□□□□□ -0.85
CDK5RAP3-231ENST00000584063 AZU1P20160 251 aa9.76□□□□□ -0.85
CDK5RAP3-231ENST00000584063 BMP5P22003 454 aa9.76□□□□□ -0.85
CDK5RAP3-231ENST00000584063 GFRA1P56159 465 aa9.76□□□□□ -0.85
CDK5RAP3-231ENST00000584063 RBM11P57052 281 aaKnown RBP9.76□□□□□ -0.85
CDK5RAP3-231ENST00000584063 GNG3P63215 75 aa9.76□□□□□ -0.85
CDK5RAP3-231ENST00000584063 FOXE3Q13461 319 aa9.76□□□□□ -0.85
CDK5RAP3-231ENST00000584063 CEACAM21Q3KPI0 293 aa9.76□□□□□ -0.85
CDK5RAP3-231ENST00000584063 ZNF880Q6PDB4 577 aa9.76□□□□□ -0.85
CDK5RAP3-231ENST00000584063 ROS1P08922 2347 aa9.76□□□□□ -0.85
CDK5RAP3-231ENST00000584063 C5orf49A4QMS7 147 aa9.76□□□□□ -0.85
CDK5RAP3-231ENST00000584063 F5H768 121 aa9.76□□□□□ -0.85
CDK5RAP3-231ENST00000584063 MRPL33O75394 65 aaKnown RBP9.76□□□□□ -0.85
CDK5RAP3-231ENST00000584063 CST2P09228 141 aa9.76□□□□□ -0.85
CDK5RAP3-231ENST00000584063 FUT3P21217 361 aa9.76□□□□□ -0.85
CDK5RAP3-231ENST00000584063 UQCRFS1P47985 274 aa9.76□□□□□ -0.85
CDK5RAP3-231ENST00000584063 GABRA6Q16445 453 aa9.76□□□□□ -0.85
CDK5RAP3-231ENST00000584063 COL5A1-AS1Q5SY13 56 aa9.76□□□□□ -0.85
CDK5RAP3-231ENST00000584063 OR4A47Q6IF82 309 aa9.76□□□□□ -0.85
CDK5RAP3-231ENST00000584063 FAM53AQ6NSI3 398 aaPredicted RBP9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms