RNA–Protein interactions for RNA: ENST00000583708.5

UBBP4-201, Transcript of ubiquitin B pseudogene 4, humanhuman

BASIC

Gene UBBP4, Length 689 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-201ENST00000583708 UCP1P25874 307 aa7.42□□□□□ -1.22
UBBP4-201ENST00000583708 COMPP49747 757 aaPredicted RBP7.42□□□□□ -1.22
UBBP4-201ENST00000583708 MECP2P51608 486 aaKnown RBP7.42□□□□□ -1.22
UBBP4-201ENST00000583708 HNF4GQ14541 408 aa7.42□□□□□ -1.22
UBBP4-201ENST00000583708 PSG5Q15238 335 aa7.42□□□□□ -1.22
UBBP4-201ENST00000583708 PHLDA2Q53GA4 152 aa7.42□□□□□ -1.22
UBBP4-201ENST00000583708 FAAP20Q6NZ36 180 aa7.42□□□□□ -1.22
UBBP4-201ENST00000583708 ZNF562Q6V9R5 426 aa7.42□□□□□ -1.22
UBBP4-201ENST00000583708 GLDNQ6ZMI3 551 aaPredicted RBP7.42□□□□□ -1.22
UBBP4-201ENST00000583708 PPP1R27Q86WC6 154 aa7.42□□□□□ -1.22
UBBP4-201ENST00000583708 MMD2Q8IY49 270 aa7.42□□□□□ -1.22
UBBP4-201ENST00000583708 Q8N9W7 124 aa7.42□□□□□ -1.22
UBBP4-201ENST00000583708 OR51H1Q8NH63 302 aa7.42□□□□□ -1.22
UBBP4-201ENST00000583708 OR2T6Q8NHC8 308 aa7.42□□□□□ -1.22
UBBP4-201ENST00000583708 RHOVQ96L33 236 aa7.42□□□□□ -1.22
UBBP4-201ENST00000583708 TMEM56Q96MV1 263 aa7.42□□□□□ -1.22
UBBP4-201ENST00000583708 TMEM222Q9H0R3 208 aa7.42□□□□□ -1.22
UBBP4-201ENST00000583708 NUBP2Q9Y5Y2 271 aa7.42□□□□□ -1.22
UBBP4-201ENST00000583708 TMEM56-RWDD3S4R434 201 aa7.42□□□□□ -1.22
UBBP4-201ENST00000583708 CLPSL1A2RUU4 121 aa7.41□□□□□ -1.22
UBBP4-201ENST00000583708 TNFSF12O43508 249 aa7.41□□□□□ -1.22
UBBP4-201ENST00000583708 OR2A4O95047 310 aa7.41□□□□□ -1.22
UBBP4-201ENST00000583708 TCRBP04435 133 aa7.41□□□□□ -1.22
UBBP4-201ENST00000583708 RLN1P04808 185 aa7.41□□□□□ -1.22
UBBP4-201ENST00000583708 CRYGBP07316 175 aa7.41□□□□□ -1.22
UBBP4-201ENST00000583708 IL6RP08887 468 aaPredicted RBP7.41□□□□□ -1.22
UBBP4-201ENST00000583708 CD24P25063 80 aa7.41□□□□□ -1.22
UBBP4-201ENST00000583708 LPAR6P43657 344 aa7.41□□□□□ -1.22
UBBP4-201ENST00000583708 RAB25P57735 213 aa7.41□□□□□ -1.22
UBBP4-201ENST00000583708 BRWD1-AS2P59051 145 aa7.41□□□□□ -1.22
UBBP4-201ENST00000583708 TMEM267Q0VDI3 215 aaPredicted RBP7.41□□□□□ -1.22
UBBP4-201ENST00000583708 DCTN2Q13561 401 aaKnown RBP7.41□□□□□ -1.22
UBBP4-201ENST00000583708 PLGLAQ15195 96 aa7.41□□□□□ -1.22
UBBP4-201ENST00000583708 ZNF585BQ52M93 769 aa7.41□□□□□ -1.22
UBBP4-201ENST00000583708 THOC7Q6I9Y2 204 aaKnown RBP7.41□□□□□ -1.22
UBBP4-201ENST00000583708 PRIMA1Q86XR5 153 aa7.41□□□□□ -1.22
UBBP4-201ENST00000583708 TMEM219Q86XT9 240 aa7.41□□□□□ -1.22
UBBP4-201ENST00000583708 FOXRED2Q8IWF2 684 aa7.41□□□□□ -1.22
UBBP4-201ENST00000583708 COMMD1Q8N668 190 aa7.41□□□□□ -1.22
UBBP4-201ENST00000583708 LRTM2Q8N967 370 aa7.41□□□□□ -1.22
UBBP4-201ENST00000583708 TMEM167AQ8TBQ9 72 aa7.41□□□□□ -1.22
UBBP4-201ENST00000583708 ENKURQ8TC29 256 aa7.41□□□□□ -1.22
UBBP4-201ENST00000583708 LSM10Q969L4 123 aaKnown RBP7.41□□□□□ -1.22
UBBP4-201ENST00000583708 OR2A7Q96R45 310 aa7.41□□□□□ -1.22
UBBP4-201ENST00000583708 SRSF8Q9BRL6 282 aaKnown RBP7.41□□□□□ -1.22
UBBP4-201ENST00000583708 METTL1Q9UBP6 276 aaKnown RBP7.41□□□□□ -1.22
UBBP4-201ENST00000583708 TBC1D24Q9ULP9 559 aa7.41□□□□□ -1.22
UBBP4-201ENST00000583708 VSIG4Q9Y279 399 aa7.41□□□□□ -1.22
UBBP4-201ENST00000583708 SIGLEC9Q9Y336 463 aa7.41□□□□□ -1.22
UBBP4-201ENST00000583708 A0A0B4J2A0 478 aa7.4□□□□□ -1.22
UBBP4-201ENST00000583708 LINC00854A0A1B0GVQ3 168 aa7.4□□□□□ -1.22
UBBP4-201ENST00000583708 AP4M1O00189 453 aa7.4□□□□□ -1.22
UBBP4-201ENST00000583708 CHST1O43916 411 aa7.4□□□□□ -1.22
UBBP4-201ENST00000583708 PRAF2O60831 178 aa7.4□□□□□ -1.22
UBBP4-201ENST00000583708 SNAPC5O75971 98 aa7.4□□□□□ -1.22
UBBP4-201ENST00000583708 ACTL6BO94805 426 aa7.4□□□□□ -1.22
UBBP4-201ENST00000583708 PTTG1O95997 202 aa7.4□□□□□ -1.22
UBBP4-201ENST00000583708 IGLV2-23P01705 113 aa7.4□□□□□ -1.22
UBBP4-201ENST00000583708 AMY1AP04745 511 aa7.4□□□□□ -1.22
UBBP4-201ENST00000583708 IGF1P05019 195 aa7.4□□□□□ -1.22
UBBP4-201ENST00000583708 IL5P05113 134 aa7.4□□□□□ -1.22
UBBP4-201ENST00000583708 PAX6P26367 422 aa7.4□□□□□ -1.22
UBBP4-201ENST00000583708 BTCP35070 178 aa7.4□□□□□ -1.22
UBBP4-201ENST00000583708 F2RL1P55085 397 aa7.4□□□□□ -1.22
UBBP4-201ENST00000583708 PLET1Q6UQ28 207 aa7.4□□□□□ -1.22
UBBP4-201ENST00000583708 HSD17B13Q7Z5P4 300 aaPredicted RBP7.4□□□□□ -1.22
UBBP4-201ENST00000583708 SLC35E3Q7Z769 313 aa7.4□□□□□ -1.22
UBBP4-201ENST00000583708 MRPL41Q8IXM3 137 aaKnown RBP7.4□□□□□ -1.22
UBBP4-201ENST00000583708 PUSL1Q8N0Z8 303 aaKnown RBP7.4□□□□□ -1.22
UBBP4-201ENST00000583708 LGI3Q8N145 548 aa7.4□□□□□ -1.22
UBBP4-201ENST00000583708 DMBX1Q8NFW5 382 aa7.4□□□□□ -1.22
UBBP4-201ENST00000583708 GLYATL2Q8WU03 294 aa7.4□□□□□ -1.22
UBBP4-201ENST00000583708 CHPT1Q8WUD6 406 aa7.4□□□□□ -1.22
UBBP4-201ENST00000583708 RBPMSQ93062 196 aaKnown RBP7.4□□□□□ -1.22
UBBP4-201ENST00000583708 R3HDM4Q96D70 268 aa7.4□□□□□ -1.22
UBBP4-201ENST00000583708 RRNAD1Q96FB5 475 aaKnown RBP7.4□□□□□ -1.22
UBBP4-201ENST00000583708 TNFRSF19Q9NS68 423 aa7.4□□□□□ -1.22
UBBP4-201ENST00000583708 SHPKQ9UHJ6 478 aa7.4□□□□□ -1.22
UBBP4-201ENST00000583708 MARCH11A6NNE9 402 aa7.39□□□□□ -1.23
UBBP4-201ENST00000583708 SRRM4A7MD48 611 aaKnown RBP7.39□□□□□ -1.23
UBBP4-201ENST00000583708 SLC25A17O43808 307 aa7.39□□□□□ -1.23
UBBP4-201ENST00000583708 RAMP3O60896 148 aa7.39□□□□□ -1.23
UBBP4-201ENST00000583708 PEX14O75381 377 aa7.39□□□□□ -1.23
UBBP4-201ENST00000583708 KBTBD11O94819 623 aa7.39□□□□□ -1.23
UBBP4-201ENST00000583708 BRI3O95415 125 aa7.39□□□□□ -1.23
UBBP4-201ENST00000583708 DUS4LO95620 317 aaKnown RBP7.39□□□□□ -1.23
UBBP4-201ENST00000583708 DHFRP00374 187 aa7.39□□□□□ -1.23
UBBP4-201ENST00000583708 H2AFB2P0C5Z0 115 aa7.39□□□□□ -1.23
UBBP4-201ENST00000583708 VSIG10L2P0DP72 767 aa7.39□□□□□ -1.23
UBBP4-201ENST00000583708 SLC25A6P12236 298 aa7.39□□□□□ -1.23
UBBP4-201ENST00000583708 AKR1C4P17516 323 aa7.39□□□□□ -1.23
UBBP4-201ENST00000583708 PI3P19957 117 aa7.39□□□□□ -1.23
UBBP4-201ENST00000583708 VDAC1P21796 283 aa7.39□□□□□ -1.23
UBBP4-201ENST00000583708 CCR6P51684 374 aa7.39□□□□□ -1.23
UBBP4-201ENST00000583708 CRIP2P52943 208 aaPredicted RBP7.39□□□□□ -1.23
UBBP4-201ENST00000583708 LINC00205P59089 165 aa7.39□□□□□ -1.23
UBBP4-201ENST00000583708 BLCAPP62952 87 aa7.39□□□□□ -1.23
UBBP4-201ENST00000583708 SLC35B1P78383 322 aa7.39□□□□□ -1.23
UBBP4-201ENST00000583708 IFITM3Q01628 133 aa7.39□□□□□ -1.23
UBBP4-201ENST00000583708 TMEM187Q14656 261 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms