RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 A0A1W2PPE3 182 aa18.61■□□□□ 0.57
CCDC47-204ENST00000582252 OR9G9P0C7N8 305 aa18.61■□□□□ 0.57
CCDC47-204ENST00000582252 LOXP28300 417 aaPredicted RBP18.61■□□□□ 0.57
CCDC47-204ENST00000582252 FHITP49789 147 aa18.61■□□□□ 0.57
CCDC47-204ENST00000582252 SPCS3P61009 180 aa18.61■□□□□ 0.57
CCDC47-204ENST00000582252 RUNX1Q01196 453 aa18.61■□□□□ 0.57
CCDC47-204ENST00000582252 ZNF273Q14593 569 aa18.61■□□□□ 0.57
CCDC47-204ENST00000582252 LRRC75BQ2VPJ9 315 aa18.61■□□□□ 0.57
CCDC47-204ENST00000582252 H1FXQ92522 213 aaKnown RBP18.61■□□□□ 0.57
CCDC47-204ENST00000582252 ZNF251Q9BRH9 671 aa18.61■□□□□ 0.57
CCDC47-204ENST00000582252 NKX6-2Q9C056 277 aaPredicted RBP18.61■□□□□ 0.57
CCDC47-204ENST00000582252 TMA7Q9Y2S6 64 aaKnown RBP18.61■□□□□ 0.57
CCDC47-204ENST00000582252 FAM96BQ9Y3D0 163 aa18.61■□□□□ 0.57
CCDC47-204ENST00000582252 C19orf84I3L1E1 186 aa18.6■□□□□ 0.57
CCDC47-204ENST00000582252 PPIHO43447 177 aaKnown RBP18.6■□□□□ 0.57
CCDC47-204ENST00000582252 IFNA17P01571 189 aa18.6■□□□□ 0.57
CCDC47-204ENST00000582252 HBE1P02100 147 aa18.6■□□□□ 0.57
CCDC47-204ENST00000582252 PPOXP50336 477 aa18.6■□□□□ 0.57
CCDC47-204ENST00000582252 ARL16Q0P5N6 197 aa18.6■□□□□ 0.57
CCDC47-204ENST00000582252 GUK1Q16774 197 aa18.6■□□□□ 0.57
CCDC47-204ENST00000582252 HAPLN4Q86UW8 402 aa18.6■□□□□ 0.57
CCDC47-204ENST00000582252 OR10P1Q8NGE3 313 aa18.6■□□□□ 0.57
CCDC47-204ENST00000582252 QTRT1Q9BXR0 403 aaKnown RBP18.6■□□□□ 0.57
CCDC47-204ENST00000582252 MS4A7Q9GZW8 240 aaPredicted RBP18.6■□□□□ 0.57
CCDC47-204ENST00000582252 KLF2Q9Y5W3 355 aaPredicted RBP18.6■□□□□ 0.57
CCDC47-204ENST00000582252 COL12A1Q99715 3063 aa18.6■□□□□ 0.57
CCDC47-204ENST00000582252 FSTL3O95633 263 aa18.6■□□□□ 0.57
CCDC47-204ENST00000582252 HRASP01112 189 aa18.6■□□□□ 0.57
CCDC47-204ENST00000582252 H2AFB1P0C5Y9 115 aa18.6■□□□□ 0.57
CCDC47-204ENST00000582252 SERF2P84101 59 aa18.6■□□□□ 0.57
CCDC47-204ENST00000582252 BTN1A1Q13410 526 aa18.6■□□□□ 0.57
CCDC47-204ENST00000582252 DHRS7BQ6IAN0 325 aaPredicted RBP18.6■□□□□ 0.57
CCDC47-204ENST00000582252 OR8G2PQ6IF36 304 aa18.6■□□□□ 0.57
CCDC47-204ENST00000582252 AIFM2Q9BRQ8 373 aa18.6■□□□□ 0.57
CCDC47-204ENST00000582252 A0A1B0GW64 132 aa18.59■□□□□ 0.57
CCDC47-204ENST00000582252 DVL1O14640 695 aa18.59■□□□□ 0.57
CCDC47-204ENST00000582252 MMP23AO75900 390 aa18.59■□□□□ 0.57
CCDC47-204ENST00000582252 SNAPINO95295 136 aa18.59■□□□□ 0.57
CCDC47-204ENST00000582252 ADCYAP1P18509 176 aa18.59■□□□□ 0.57
CCDC47-204ENST00000582252 RTL8BQ17RB0 113 aa18.59■□□□□ 0.57
CCDC47-204ENST00000582252 PDLIM3Q53GG5 364 aaPredicted RBP18.59■□□□□ 0.57
CCDC47-204ENST00000582252 TMEM200BQ69YZ2 307 aa18.59■□□□□ 0.57
CCDC47-204ENST00000582252 SSX9Q7RTT3 188 aa18.59■□□□□ 0.57
CCDC47-204ENST00000582252 OR4C12Q96R67 309 aa18.59■□□□□ 0.57
CCDC47-204ENST00000582252 TMEM147Q9BVK8 224 aa18.59■□□□□ 0.57
CCDC47-204ENST00000582252 WDR61Q9GZS3 305 aaKnown RBP18.59■□□□□ 0.57
CCDC47-204ENST00000582252 HIPK2Q9H2X6 1198 aa18.59■□□□□ 0.57
CCDC47-204ENST00000582252 SMDT1Q9H4I9 107 aa18.59■□□□□ 0.57
CCDC47-204ENST00000582252 TMEM140Q9NV12 185 aa18.59■□□□□ 0.57
CCDC47-204ENST00000582252 FBXO7Q9Y3I1 522 aa18.59■□□□□ 0.57
CCDC47-204ENST00000582252 SFTA3P0C7M3 94 aa18.58■□□□□ 0.57
CCDC47-204ENST00000582252 TAGLNQ01995 201 aaKnown RBP18.58■□□□□ 0.57
CCDC47-204ENST00000582252 LYPD2Q6UXB3 125 aa18.58■□□□□ 0.57
CCDC47-204ENST00000582252 SREK1IP1Q8N9Q2 155 aaPredicted RBP18.58■□□□□ 0.57
CCDC47-204ENST00000582252 ZDHHC16Q969W1 377 aa18.58■□□□□ 0.57
CCDC47-204ENST00000582252 EIF5A2Q9GZV4 153 aaKnown RBP18.58■□□□□ 0.57
CCDC47-204ENST00000582252 RALYQ9UKM9 306 aaKnown RBP18.58■□□□□ 0.57
CCDC47-204ENST00000582252 TIMM9Q9Y5J7 89 aa18.58■□□□□ 0.57
CCDC47-204ENST00000582252 RNF224P0DH78 156 aa18.57■□□□□ 0.56
CCDC47-204ENST00000582252 OR2B8PP59922 312 aa18.57■□□□□ 0.56
CCDC47-204ENST00000582252 ZNF429Q86V71 674 aa18.57■□□□□ 0.56
CCDC47-204ENST00000582252 C8orf31Q8N9H6 132 aa18.57■□□□□ 0.56
CCDC47-204ENST00000582252 ZNF383Q8NA42 475 aa18.57■□□□□ 0.56
CCDC47-204ENST00000582252 KPTNQ9Y664 436 aa18.57■□□□□ 0.56
CCDC47-204ENST00000582252 TRBV23-1A0A0A0MS06 115 aa18.57■□□□□ 0.56
CCDC47-204ENST00000582252 UBE2L5PA0A1B0GUS4 154 aa18.57■□□□□ 0.56
CCDC47-204ENST00000582252 GNB2P62879 340 aa18.57■□□□□ 0.56
CCDC47-204ENST00000582252 RELBQ01201 579 aa18.57■□□□□ 0.56
CCDC47-204ENST00000582252 POU2AF1Q16633 256 aa18.57■□□□□ 0.56
CCDC47-204ENST00000582252 UTF1Q5T230 341 aa18.57■□□□□ 0.56
CCDC47-204ENST00000582252 FAM71F2Q6NXP2 309 aa18.57■□□□□ 0.56
CCDC47-204ENST00000582252 TAF15Q92804 592 aaKnown RBP eCLIP18.57■□□□□ 0.56
CCDC47-204ENST00000582252 CTSZQ9UBR2 303 aa18.57■□□□□ 0.56
CCDC47-204ENST00000582252 YLPM1P49750 1951 aaKnown RBP18.57■□□□□ 0.56
CCDC47-204ENST00000582252 HRNRQ86YZ3 2850 aaPredicted RBP18.56■□□□□ 0.56
CCDC47-204ENST00000582252 CCL3L1P16619 93 aa18.56■□□□□ 0.56
CCDC47-204ENST00000582252 C1orf229Q6ZS94 237 aaPredicted RBP18.56■□□□□ 0.56
CCDC47-204ENST00000582252 ZNF833PQ6ZTB9 187 aa18.56■□□□□ 0.56
CCDC47-204ENST00000582252 RBMXL1Q96E39 390 aaKnown RBP18.56■□□□□ 0.56
CCDC47-204ENST00000582252 SLC35D1Q9NTN3 355 aa18.56■□□□□ 0.56
CCDC47-204ENST00000582252 RFNGQ9Y644 331 aa18.56■□□□□ 0.56
CCDC47-204ENST00000582252 ATRAIDQ6UW56 229 aa18.55■□□□□ 0.56
CCDC47-204ENST00000582252 PUSL1Q8N0Z8 303 aaKnown RBP18.55■□□□□ 0.56
CCDC47-204ENST00000582252 RHOVQ96L33 236 aa18.55■□□□□ 0.56
CCDC47-204ENST00000582252 RSG1Q9BU20 258 aa18.55■□□□□ 0.56
CCDC47-204ENST00000582252 RAB1BQ9H0U4 201 aa18.55■□□□□ 0.56
CCDC47-204ENST00000582252 KIAA1456Q9P272 454 aa18.55■□□□□ 0.56
CCDC47-204ENST00000582252 C15orf61A6NNL5 157 aa18.54■□□□□ 0.56
CCDC47-204ENST00000582252 PMS2P5A8MQ11 134 aa18.54■□□□□ 0.56
CCDC47-204ENST00000582252 GOSR1O95249 250 aa18.54■□□□□ 0.56
CCDC47-204ENST00000582252 APOA2P02652 100 aa18.54■□□□□ 0.56
CCDC47-204ENST00000582252 LINC00311Q8N616 119 aa18.54■□□□□ 0.56
CCDC47-204ENST00000582252 FOXA2Q9Y261 457 aaPredicted RBP18.54■□□□□ 0.56
CCDC47-204ENST00000582252 ARG1P05089 322 aa18.54■□□□□ 0.56
CCDC47-204ENST00000582252 SRSF1Q07955 248 aaKnown RBP eCLIP18.54■□□□□ 0.56
CCDC47-204ENST00000582252 VKORC1L1Q8N0U8 176 aa18.54■□□□□ 0.56
CCDC47-204ENST00000582252 FAM157AC9JC47 383 aa18.53■□□□□ 0.56
CCDC47-204ENST00000582252 GPR37O15354 613 aa18.53■□□□□ 0.56
CCDC47-204ENST00000582252 FCN3O75636 299 aa18.53■□□□□ 0.56
CCDC47-204ENST00000582252 CT45A6P0DMU7 189 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms