RNA–Protein interactions for RNA: ENST00000582122.1

TOP3A-212, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-212ENST00000582122 DGCR2P98153 550 aa8.21□□□□□ -1.1
TOP3A-212ENST00000582122 SRSF4Q08170 494 aaKnown RBP8.21□□□□□ -1.1
TOP3A-212ENST00000582122 SURF2Q15527 256 aaPredicted RBP8.21□□□□□ -1.1
TOP3A-212ENST00000582122 TMEM65Q6PI78 240 aa8.21□□□□□ -1.1
TOP3A-212ENST00000582122 ZNF818PQ6ZRF7 136 aa8.21□□□□□ -1.1
TOP3A-212ENST00000582122 LINC00299Q6ZSB3 139 aa8.21□□□□□ -1.1
TOP3A-212ENST00000582122 MMD2Q8IY49 270 aa8.21□□□□□ -1.1
TOP3A-212ENST00000582122 SPAG16Q8N0X2 631 aa8.21□□□□□ -1.1
TOP3A-212ENST00000582122 RNF152Q8N8N0 203 aa8.21□□□□□ -1.1
TOP3A-212ENST00000582122 OR5M8Q8NGP6 311 aa8.21□□□□□ -1.1
TOP3A-212ENST00000582122 OR4A5Q8NH83 315 aa8.21□□□□□ -1.1
TOP3A-212ENST00000582122 TERB2Q8NHR7 220 aa8.21□□□□□ -1.1
TOP3A-212ENST00000582122 ABHD5Q8WTS1 349 aa8.21□□□□□ -1.1
TOP3A-212ENST00000582122 ARPC1AQ92747 370 aa8.21□□□□□ -1.1
TOP3A-212ENST00000582122 NOL4LQ96MY1 436 aaPredicted RBP8.21□□□□□ -1.1
TOP3A-212ENST00000582122 PRRT1Q99946 306 aa8.21□□□□□ -1.1
TOP3A-212ENST00000582122 CITED2Q99967 270 aaPredicted RBP8.21□□□□□ -1.1
TOP3A-212ENST00000582122 HSPB9Q9BQS6 159 aa8.21□□□□□ -1.1
TOP3A-212ENST00000582122 RSRP1Q9BUV0 290 aa8.21□□□□□ -1.1
TOP3A-212ENST00000582122 PARP11Q9NR21 331 aa8.21□□□□□ -1.1
TOP3A-212ENST00000582122 COMMD9Q9P000 198 aa8.21□□□□□ -1.1
TOP3A-212ENST00000582122 SCP2D1Q9UJQ7 156 aa8.21□□□□□ -1.1
TOP3A-212ENST00000582122 PIGBOS1A0A0B4J2F0 54 aa8.2□□□□□ -1.1
TOP3A-212ENST00000582122 DPPA5A6NC42 116 aa8.2□□□□□ -1.1
TOP3A-212ENST00000582122 H3BUA1 57 aa8.2□□□□□ -1.1
TOP3A-212ENST00000582122 ATP6V0E1O15342 81 aa8.2□□□□□ -1.1
TOP3A-212ENST00000582122 PGLYRP1O75594 196 aaPredicted RBP8.2□□□□□ -1.1
TOP3A-212ENST00000582122 ATG12O94817 140 aa8.2□□□□□ -1.1
TOP3A-212ENST00000582122 OR2A4O95047 310 aa8.2□□□□□ -1.1
TOP3A-212ENST00000582122 CA2P00918 260 aa8.2□□□□□ -1.1
TOP3A-212ENST00000582122 CRYGBP07316 175 aa8.2□□□□□ -1.1
TOP3A-212ENST00000582122 PGAM2P15259 253 aa8.2□□□□□ -1.1
TOP3A-212ENST00000582122 F2RP25116 425 aa8.2□□□□□ -1.1
TOP3A-212ENST00000582122 LINC00205P59089 165 aa8.2□□□□□ -1.1
TOP3A-212ENST00000582122 ERVK-16P61578 105 aa8.2□□□□□ -1.1
TOP3A-212ENST00000582122 RND3P61587 244 aa8.2□□□□□ -1.1
TOP3A-212ENST00000582122 RPL30P62888 115 aaKnown RBP8.2□□□□□ -1.1
TOP3A-212ENST00000582122 FXYD3Q14802 87 aa8.2□□□□□ -1.1
TOP3A-212ENST00000582122 POU2AF1Q16633 256 aa8.2□□□□□ -1.1
TOP3A-212ENST00000582122 PRSS8Q16651 343 aa8.2□□□□□ -1.1
TOP3A-212ENST00000582122 PYDC2Q56P42 97 aa8.2□□□□□ -1.1
TOP3A-212ENST00000582122 RNASE12Q5GAN4 147 aaKnown RBP8.2□□□□□ -1.1
TOP3A-212ENST00000582122 TREML4Q6UXN2 200 aa8.2□□□□□ -1.1
TOP3A-212ENST00000582122 ZNF329Q86UD4 541 aa8.2□□□□□ -1.1
TOP3A-212ENST00000582122 Q8N402 240 aa8.2□□□□□ -1.1
TOP3A-212ENST00000582122 CCDC71LQ8N9Z2 235 aa8.2□□□□□ -1.1
TOP3A-212ENST00000582122 RHOVQ96L33 236 aa8.2□□□□□ -1.1
TOP3A-212ENST00000582122 OR2A7Q96R45 310 aa8.2□□□□□ -1.1
TOP3A-212ENST00000582122 SPIN2AQ99865 258 aa8.2□□□□□ -1.1
TOP3A-212ENST00000582122 SPIN2BQ9BPZ2 258 aa8.2□□□□□ -1.1
TOP3A-212ENST00000582122 THAP7Q9BT49 309 aaPredicted RBP8.2□□□□□ -1.1
TOP3A-212ENST00000582122 BATF3Q9NR55 127 aa8.2□□□□□ -1.1
TOP3A-212ENST00000582122 FOXA2Q9Y261 457 aaPredicted RBP8.2□□□□□ -1.1
TOP3A-212ENST00000582122 NUBP2Q9Y5Y2 271 aa8.2□□□□□ -1.1
TOP3A-212ENST00000582122 ANKRD20A5PA0PJZ0 165 aa8.19□□□□□ -1.1
TOP3A-212ENST00000582122 SRRM4A7MD48 611 aaKnown RBP8.19□□□□□ -1.1
TOP3A-212ENST00000582122 M0QYG6 137 aa8.19□□□□□ -1.1
TOP3A-212ENST00000582122 TNFSF12O43508 249 aa8.19□□□□□ -1.1
TOP3A-212ENST00000582122 PF4V1P10720 104 aa8.19□□□□□ -1.1
TOP3A-212ENST00000582122 RPA2P15927 270 aa8.19□□□□□ -1.1
TOP3A-212ENST00000582122 CDX1P47902 265 aaPredicted RBP8.19□□□□□ -1.1
TOP3A-212ENST00000582122 RPL23AP62750 156 aaKnown RBP8.19□□□□□ -1.1
TOP3A-212ENST00000582122 CFHR3Q02985 330 aa8.19□□□□□ -1.1
TOP3A-212ENST00000582122 KHDC1LQ5JSQ8 128 aa8.19□□□□□ -1.1
TOP3A-212ENST00000582122 CCDC190Q86UF4 302 aa8.19□□□□□ -1.1
TOP3A-212ENST00000582122 SLC25A42Q86VD7 318 aa8.19□□□□□ -1.1
TOP3A-212ENST00000582122 LHFPL1Q86WI0 220 aa8.19□□□□□ -1.1
TOP3A-212ENST00000582122 C11orf44Q8N8P7 122 aa8.19□□□□□ -1.1
TOP3A-212ENST00000582122 GDPD1Q8N9F7 314 aa8.19□□□□□ -1.1
TOP3A-212ENST00000582122 MINDY2Q8NBR6 621 aa8.19□□□□□ -1.1
TOP3A-212ENST00000582122 OR51H1Q8NH63 302 aa8.19□□□□□ -1.1
TOP3A-212ENST00000582122 TINAGL1Q9GZM7 467 aaPredicted RBP8.19□□□□□ -1.1
TOP3A-212ENST00000582122 FXYD6Q9H0Q3 95 aa8.19□□□□□ -1.1
TOP3A-212ENST00000582122 SLA2Q9H6Q3 261 aa8.19□□□□□ -1.1
TOP3A-212ENST00000582122 SLC2A8Q9NY64 477 aa8.19□□□□□ -1.1
TOP3A-212ENST00000582122 BET1LQ9NYM9 111 aa8.19□□□□□ -1.1
TOP3A-212ENST00000582122 C14orf166Q9Y224 244 aaKnown RBP8.19□□□□□ -1.1
TOP3A-212ENST00000582122 WNK1Q9H4A3 2382 aa8.18□□□□□ -1.1
TOP3A-212ENST00000582122 LINC01548A6NM66 108 aa8.18□□□□□ -1.1
TOP3A-212ENST00000582122 FCN1O00602 326 aa8.18□□□□□ -1.1
TOP3A-212ENST00000582122 KBTBD11O94819 623 aa8.18□□□□□ -1.1
TOP3A-212ENST00000582122 BRI3O95415 125 aa8.18□□□□□ -1.1
TOP3A-212ENST00000582122 RLN1P04808 185 aa8.18□□□□□ -1.1
TOP3A-212ENST00000582122 SAA1P0DJI8 122 aaPredicted RBP8.18□□□□□ -1.1
TOP3A-212ENST00000582122 PSMB8P28062 276 aa8.18□□□□□ -1.1
TOP3A-212ENST00000582122 PPIFP30405 207 aaKnown RBP8.18□□□□□ -1.1
TOP3A-212ENST00000582122 DEFA6Q01524 100 aa8.18□□□□□ -1.1
TOP3A-212ENST00000582122 ZNF45Q02386 682 aa8.18□□□□□ -1.1
TOP3A-212ENST00000582122 NSUN5P1Q3KNT7 163 aa8.18□□□□□ -1.1
TOP3A-212ENST00000582122 SCGB2B2Q4G0G5 96 aa8.18□□□□□ -1.1
TOP3A-212ENST00000582122 OR2B11Q5JQS5 317 aa8.18□□□□□ -1.1
TOP3A-212ENST00000582122 THOC7Q6I9Y2 204 aaKnown RBP8.18□□□□□ -1.1
TOP3A-212ENST00000582122 UNQ5815/PRO19632Q6UWF5 114 aa8.18□□□□□ -1.1
TOP3A-212ENST00000582122 ZNF695Q8IW36 515 aa8.18□□□□□ -1.1
TOP3A-212ENST00000582122 PUSL1Q8N0Z8 303 aaKnown RBP8.18□□□□□ -1.1
TOP3A-212ENST00000582122 TOMM5Q8N4H5 51 aa8.18□□□□□ -1.1
TOP3A-212ENST00000582122 DMBX1Q8NFW5 382 aa8.18□□□□□ -1.1
TOP3A-212ENST00000582122 OR6Q1Q8NGQ2 317 aa8.18□□□□□ -1.1
TOP3A-212ENST00000582122 TMEM167AQ8TBQ9 72 aa8.18□□□□□ -1.1
TOP3A-212ENST00000582122 R3HDM4Q96D70 268 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms