RNA–Protein interactions for RNA: ENST00000580949.1

PTPRM-213, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 687 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-213ENST00000580949 GOSR1O95249 250 aa5.06□□□□□ -1.6
PTPRM-213ENST00000580949 KRASP01116 189 aa5.06□□□□□ -1.6
PTPRM-213ENST00000580949 CT45A6P0DMU7 189 aa5.06□□□□□ -1.6
PTPRM-213ENST00000580949 CT45A5P0DMU8 189 aa5.06□□□□□ -1.6
PTPRM-213ENST00000580949 CT45A7P0DMV0 189 aa5.06□□□□□ -1.6
PTPRM-213ENST00000580949 IGHV1-8P0DP01 117 aa5.06□□□□□ -1.6
PTPRM-213ENST00000580949 HKR1P10072 659 aa5.06□□□□□ -1.6
PTPRM-213ENST00000580949 SLC25A6P12236 298 aa5.06□□□□□ -1.6
PTPRM-213ENST00000580949 ZFP36P26651 326 aaKnown RBP5.06□□□□□ -1.6
PTPRM-213ENST00000580949 G6PCP35575 357 aa5.06□□□□□ -1.6
PTPRM-213ENST00000580949 GPR6P46095 362 aaPredicted RBP5.06□□□□□ -1.6
PTPRM-213ENST00000580949 RAB7AP51149 207 aa5.06□□□□□ -1.6
PTPRM-213ENST00000580949 PTTG1IPP53801 180 aa5.06□□□□□ -1.6
PTPRM-213ENST00000580949 PAX9P55771 341 aa5.06□□□□□ -1.6
PTPRM-213ENST00000580949 POLR2GP62487 172 aaKnown RBP eCLIP5.06□□□□□ -1.6
PTPRM-213ENST00000580949 OR2F1Q13607 317 aa5.06□□□□□ -1.6
PTPRM-213ENST00000580949 DIAPH2-AS1Q14236 149 aa5.06□□□□□ -1.6
PTPRM-213ENST00000580949 TEX261Q6UWH6 196 aa5.06□□□□□ -1.6
PTPRM-213ENST00000580949 LYG1Q8N1E2 194 aa5.06□□□□□ -1.6
PTPRM-213ENST00000580949 ZNF525Q8N782 197 aa5.06□□□□□ -1.6
PTPRM-213ENST00000580949 Q8N7P7 452 aa5.06□□□□□ -1.6
PTPRM-213ENST00000580949 C8orf31Q8N9H6 132 aa5.06□□□□□ -1.6
PTPRM-213ENST00000580949 ZNF383Q8NA42 475 aa5.06□□□□□ -1.6
PTPRM-213ENST00000580949 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.06□□□□□ -1.6
PTPRM-213ENST00000580949 ZNF680Q8NEM1 530 aa5.06□□□□□ -1.6
PTPRM-213ENST00000580949 OR8B3Q8NGG8 313 aa5.06□□□□□ -1.6
PTPRM-213ENST00000580949 ZNF596Q8TC21 504 aa5.06□□□□□ -1.6
PTPRM-213ENST00000580949 NRGNQ92686 78 aa5.06□□□□□ -1.6
PTPRM-213ENST00000580949 LSM10Q969L4 123 aaKnown RBP5.06□□□□□ -1.6
PTPRM-213ENST00000580949 RAB24Q969Q5 203 aa5.06□□□□□ -1.6
PTPRM-213ENST00000580949 ST6GALNAC6Q969X2 333 aa5.06□□□□□ -1.6
PTPRM-213ENST00000580949 OR8B2Q96RD0 313 aa5.06□□□□□ -1.6
PTPRM-213ENST00000580949 ARL6Q9H0F7 186 aa5.06□□□□□ -1.6
PTPRM-213ENST00000580949 MAGT1Q9H0U3 335 aa5.06□□□□□ -1.6
PTPRM-213ENST00000580949 CYTL1Q9NRR1 136 aa5.06□□□□□ -1.6
PTPRM-213ENST00000580949 FAM212BQ9NTI7 297 aaPredicted RBP5.06□□□□□ -1.6
PTPRM-213ENST00000580949 CACNG5Q9UF02 275 aa5.06□□□□□ -1.6
PTPRM-213ENST00000580949 RCL1Q9Y2P8 373 aaKnown RBP5.06□□□□□ -1.6
PTPRM-213ENST00000580949 POMT1Q9Y6A1 747 aa5.06□□□□□ -1.6
PTPRM-213ENST00000580949 U3KQ87 197 aa5.06□□□□□ -1.6
PTPRM-213ENST00000580949 LOC105371242A0A075B767 164 aa5.05□□□□□ -1.6
PTPRM-213ENST00000580949 PPIAL4CA0A0B4J2A2 164 aa5.05□□□□□ -1.6
PTPRM-213ENST00000580949 A0A0D9SG52 128 aa5.05□□□□□ -1.6
PTPRM-213ENST00000580949 J3QR06 171 aa5.05□□□□□ -1.6
PTPRM-213ENST00000580949 ST8SIA3O43173 380 aa5.05□□□□□ -1.6
PTPRM-213ENST00000580949 RBFOX2O43251 390 aaKnown RBP eCLIP5.05□□□□□ -1.6
PTPRM-213ENST00000580949 BCL2L11O43521 198 aa5.05□□□□□ -1.6
PTPRM-213ENST00000580949 CHST1O43916 411 aa5.05□□□□□ -1.6
PTPRM-213ENST00000580949 FCGR3BO75015 233 aa5.05□□□□□ -1.6
PTPRM-213ENST00000580949 SNAPC5O75971 98 aa5.05□□□□□ -1.6
PTPRM-213ENST00000580949 NXPH3O95157 252 aa5.05□□□□□ -1.6
PTPRM-213ENST00000580949 PPIAL4GP0DN37 164 aa5.05□□□□□ -1.6
PTPRM-213ENST00000580949 MALP21145 153 aa5.05□□□□□ -1.6
PTPRM-213ENST00000580949 GCSHP23434 173 aa5.05□□□□□ -1.6
PTPRM-213ENST00000580949 LMO4P61968 165 aa5.05□□□□□ -1.6
PTPRM-213ENST00000580949 CATR1Q13166 79 aa5.05□□□□□ -1.6
PTPRM-213ENST00000580949 ZNF345Q14585 488 aa5.05□□□□□ -1.6
PTPRM-213ENST00000580949 SMCO1Q147U7 214 aa5.05□□□□□ -1.6
PTPRM-213ENST00000580949 MIDNQ504T8 468 aa5.05□□□□□ -1.6
PTPRM-213ENST00000580949 ESCO2Q56NI9 601 aa5.05□□□□□ -1.6
PTPRM-213ENST00000580949 CLEC9AQ6UXN8 241 aa5.05□□□□□ -1.6
PTPRM-213ENST00000580949 ZNF833PQ6ZTB9 187 aa5.05□□□□□ -1.6
PTPRM-213ENST00000580949 VKORC1L1Q8N0U8 176 aa5.05□□□□□ -1.6
PTPRM-213ENST00000580949 ABHD12Q8N2K0 398 aa5.05□□□□□ -1.6
PTPRM-213ENST00000580949 LINC00311Q8N616 119 aa5.05□□□□□ -1.6
PTPRM-213ENST00000580949 TCTEX1D1Q8N7M0 179 aa5.05□□□□□ -1.6
PTPRM-213ENST00000580949 INO80EQ8NBZ0 244 aaPredicted RBP5.05□□□□□ -1.6
PTPRM-213ENST00000580949 OR8H1Q8NGG4 311 aa5.05□□□□□ -1.6
PTPRM-213ENST00000580949 AQP10Q96PS8 301 aa5.05□□□□□ -1.6
PTPRM-213ENST00000580949 NEU1Q99519 415 aa5.05□□□□□ -1.6
PTPRM-213ENST00000580949 SPIN2AQ99865 258 aa5.05□□□□□ -1.6
PTPRM-213ENST00000580949 SPIN2BQ9BPZ2 258 aa5.05□□□□□ -1.6
PTPRM-213ENST00000580949 TMEM133Q9H2Q1 129 aa5.05□□□□□ -1.6
PTPRM-213ENST00000580949 WFDC1Q9HC57 220 aa5.05□□□□□ -1.6
PTPRM-213ENST00000580949 MMP24Q9Y5R2 645 aa5.05□□□□□ -1.6
PTPRM-213ENST00000580949 SESN1Q9Y6P5 492 aa5.05□□□□□ -1.6
PTPRM-213ENST00000580949 USP9YO00507 2555 aaPredicted RBP5.05□□□□□ -1.6
PTPRM-213ENST00000580949 DSCAML1Q8TD84 2053 aa5.04□□□□□ -1.6
PTPRM-213ENST00000580949 MED13LQ71F56 2210 aa5.04□□□□□ -1.6
PTPRM-213ENST00000580949 TRAV3A0A0B4J244 114 aa5.04□□□□□ -1.6
PTPRM-213ENST00000580949 IGSF23A1L1A6 192 aa5.04□□□□□ -1.6
PTPRM-213ENST00000580949 FAM24AA6NFZ4 105 aa5.04□□□□□ -1.6
PTPRM-213ENST00000580949 E5RGE8 158 aa5.04□□□□□ -1.6
PTPRM-213ENST00000580949 IGLV1-47P01700 117 aa5.04□□□□□ -1.6
PTPRM-213ENST00000580949 IGHV2-5P01817 119 aa5.04□□□□□ -1.6
PTPRM-213ENST00000580949 RLN2P04090 185 aa5.04□□□□□ -1.6
PTPRM-213ENST00000580949 PLA2G2AP14555 144 aa5.04□□□□□ -1.6
PTPRM-213ENST00000580949 COX6B1P14854 86 aa5.04□□□□□ -1.6
PTPRM-213ENST00000580949 RPL12P30050 165 aaKnown RBP5.04□□□□□ -1.6
PTPRM-213ENST00000580949 NKX2-1P43699 371 aaPredicted RBP5.04□□□□□ -1.6
PTPRM-213ENST00000580949 REG1BP48304 166 aa5.04□□□□□ -1.6
PTPRM-213ENST00000580949 THBS3P49746 956 aa5.04□□□□□ -1.6
PTPRM-213ENST00000580949 AKR1C2P52895 323 aa5.04□□□□□ -1.6
PTPRM-213ENST00000580949 KRTAP10-9P60411 292 aa5.04□□□□□ -1.6
PTPRM-213ENST00000580949 ARF6P62330 175 aa5.04□□□□□ -1.6
PTPRM-213ENST00000580949 PAX2Q02962 417 aa5.04□□□□□ -1.6
PTPRM-213ENST00000580949 EXOSC2Q13868 293 aaKnown RBP5.04□□□□□ -1.6
PTPRM-213ENST00000580949 KHDC1LQ5JSQ8 128 aa5.04□□□□□ -1.6
PTPRM-213ENST00000580949 LDLRAD2Q5SZI1 272 aa5.04□□□□□ -1.6
PTPRM-213ENST00000580949 IGFL4Q6B9Z1 124 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms