RNA–Protein interactions for RNA: ENST00000580498.5

SMG8-204, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 5

Gene SMG8, Length 785 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-204ENST00000580498 DCUN1D4Q92564 292 aa15.6■□□□□ 0.09
SMG8-204ENST00000580498 KCTD12Q96CX2 325 aaKnown RBP15.6■□□□□ 0.09
SMG8-204ENST00000580498 C5orf30Q96GV9 206 aa15.6■□□□□ 0.09
SMG8-204ENST00000580498 USMG5Q96IX5 58 aa15.6■□□□□ 0.09
SMG8-204ENST00000580498 ZNF256Q9Y2P7 627 aaPredicted RBP15.6■□□□□ 0.09
SMG8-204ENST00000580498 HERV-K104P61576 105 aa15.59■□□□□ 0.09
SMG8-204ENST00000580498 LSM3P62310 102 aaKnown RBP15.59■□□□□ 0.09
SMG8-204ENST00000580498 TATDN3Q17R31 274 aa15.59■□□□□ 0.09
SMG8-204ENST00000580498 SAMD12Q8N8I0 201 aa15.59■□□□□ 0.09
SMG8-204ENST00000580498 OR13F1Q8NGS4 319 aa15.59■□□□□ 0.09
SMG8-204ENST00000580498 SRSF12Q8WXF0 261 aaKnown RBP15.59■□□□□ 0.09
SMG8-204ENST00000580498 YIPF6Q96EC8 236 aa15.59■□□□□ 0.09
SMG8-204ENST00000580498 RHOVQ96L33 236 aa15.59■□□□□ 0.09
SMG8-204ENST00000580498 ALX4Q9H161 411 aaPredicted RBP15.59■□□□□ 0.09
SMG8-204ENST00000580498 TAS2R8Q9NYW2 309 aa15.59■□□□□ 0.09
SMG8-204ENST00000580498 PRKDCP78527 4128 aaKnown RBP15.58■□□□□ 0.08
SMG8-204ENST00000580498 IGHV4OR15-8A0A075B7B6 117 aa15.58■□□□□ 0.08
SMG8-204ENST00000580498 A0A087WW49 117 aa15.58■□□□□ 0.08
SMG8-204ENST00000580498 MSGN1A6NI15 193 aa15.58■□□□□ 0.08
SMG8-204ENST00000580498 SAA1P0DJI8 122 aaPredicted RBP15.58■□□□□ 0.08
SMG8-204ENST00000580498 PJVKQ0ZLH3 352 aa15.58■□□□□ 0.08
SMG8-204ENST00000580498 OR2B11Q5JQS5 317 aa15.58■□□□□ 0.08
SMG8-204ENST00000580498 DPPA5A6NC42 116 aa15.57■□□□□ 0.08
SMG8-204ENST00000580498 SRRM4A7MD48 611 aaKnown RBP15.57■□□□□ 0.08
SMG8-204ENST00000580498 BRI3O95415 125 aa15.57■□□□□ 0.08
SMG8-204ENST00000580498 PPYP01298 95 aa15.57■□□□□ 0.08
SMG8-204ENST00000580498 OR9G9P0C7N8 305 aa15.57■□□□□ 0.08
SMG8-204ENST00000580498 SLURP1P55000 103 aa15.57■□□□□ 0.08
SMG8-204ENST00000580498 FAM209BQ5JX69 171 aa15.57■□□□□ 0.08
SMG8-204ENST00000580498 IDO2Q6ZQW0 420 aa15.57■□□□□ 0.08
SMG8-204ENST00000580498 MFSD4AQ8N468 514 aa15.57■□□□□ 0.08
SMG8-204ENST00000580498 GVQW1Q8N7I0 195 aa15.57■□□□□ 0.08
SMG8-204ENST00000580498 OR5AP2Q8NGF4 316 aa15.57■□□□□ 0.08
SMG8-204ENST00000580498 DLX4Q92988 240 aaPredicted RBP15.57■□□□□ 0.08
SMG8-204ENST00000580498 B9D2Q9BPU9 175 aa15.57■□□□□ 0.08
SMG8-204ENST00000580498 TINAGL1Q9GZM7 467 aaPredicted RBP15.57■□□□□ 0.08
SMG8-204ENST00000580498 SLC5A7Q9GZV3 580 aa15.57■□□□□ 0.08
SMG8-204ENST00000580498 IGKV1D-13A0A0B4J2D9 117 aa15.56■□□□□ 0.08
SMG8-204ENST00000580498 OR2A4O95047 310 aa15.56■□□□□ 0.08
SMG8-204ENST00000580498 IGKV1-13P0DP09 117 aa15.56■□□□□ 0.08
SMG8-204ENST00000580498 MAS1LP35410 378 aa15.56■□□□□ 0.08
SMG8-204ENST00000580498 RPS19P39019 145 aaKnown RBP15.56■□□□□ 0.08
SMG8-204ENST00000580498 TAS2R46P59540 309 aa15.56■□□□□ 0.08
SMG8-204ENST00000580498 FXYD4P59646 89 aa15.56■□□□□ 0.08
SMG8-204ENST00000580498 ASPHD1Q5U4P2 390 aa15.56■□□□□ 0.08
SMG8-204ENST00000580498 SLC25A46Q96AG3 418 aa15.56■□□□□ 0.08
SMG8-204ENST00000580498 OR2A7Q96R45 310 aa15.56■□□□□ 0.08
SMG8-204ENST00000580498 PRR25Q96S07 402 aa15.56■□□□□ 0.08
SMG8-204ENST00000580498 SCOCQ9UIL1 159 aa15.56■□□□□ 0.08
SMG8-204ENST00000580498 DHFRP00374 187 aa15.55■□□□□ 0.08
SMG8-204ENST00000580498 S100GP29377 79 aa15.55■□□□□ 0.08
SMG8-204ENST00000580498 PRSS3P35030 304 aa15.55■□□□□ 0.08
SMG8-204ENST00000580498 CD300LFQ8TDQ1 290 aa15.55■□□□□ 0.08
SMG8-204ENST00000580498 CMTM3Q96MX0 182 aa15.55■□□□□ 0.08
SMG8-204ENST00000580498 ZNF430Q9H8G1 570 aaPredicted RBP15.55■□□□□ 0.08
SMG8-204ENST00000580498 EHFQ9NZC4 300 aa15.55■□□□□ 0.08
SMG8-204ENST00000580498 FAM223BA6NKX1 122 aa15.54■□□□□ 0.08
SMG8-204ENST00000580498 ACSM6Q6P461 480 aa15.54■□□□□ 0.08
SMG8-204ENST00000580498 MZT2AQ6P582 158 aa15.54■□□□□ 0.08
SMG8-204ENST00000580498 FAM223AQ8IWN6 122 aa15.54■□□□□ 0.08
SMG8-204ENST00000580498 OR5H2Q8NGV7 314 aa15.54■□□□□ 0.08
SMG8-204ENST00000580498 GIMAP1Q8WWP7 306 aa15.54■□□□□ 0.08
SMG8-204ENST00000580498 AP3S1Q92572 193 aa15.54■□□□□ 0.08
SMG8-204ENST00000580498 FUNDC2Q9BWH2 189 aa15.54■□□□□ 0.08
SMG8-204ENST00000580498 PEF1Q9UBV8 284 aaKnown RBP15.54■□□□□ 0.08
SMG8-204ENST00000580498 ANKRD34BA5PLL1 514 aa15.53■□□□□ 0.08
SMG8-204ENST00000580498 MEIS3P1A6NDR6 274 aa15.53■□□□□ 0.08
SMG8-204ENST00000580498 KBTBD11O94819 623 aa15.53■□□□□ 0.08
SMG8-204ENST00000580498 FCER2P06734 321 aa15.53■□□□□ 0.08
SMG8-204ENST00000580498 NHLRC4P0CG21 123 aaPredicted RBP15.53■□□□□ 0.08
SMG8-204ENST00000580498 APELAP0DMC3 54 aa15.53■□□□□ 0.08
SMG8-204ENST00000580498 TAS2R20P59543 309 aa15.53■□□□□ 0.08
SMG8-204ENST00000580498 RPL30P62888 115 aaKnown RBP15.53■□□□□ 0.08
SMG8-204ENST00000580498 VAX1Q5SQQ9 334 aa15.53■□□□□ 0.08
SMG8-204ENST00000580498 TMEM17Q86X19 198 aa15.53■□□□□ 0.08
SMG8-204ENST00000580498 ANKRD13BQ86YJ7 626 aa15.53■□□□□ 0.08
SMG8-204ENST00000580498 SPAG16Q8N0X2 631 aa15.53■□□□□ 0.08
SMG8-204ENST00000580498 OR4A5Q8NH83 315 aa15.53■□□□□ 0.08
SMG8-204ENST00000580498 SNAPC3Q92966 411 aa15.53■□□□□ 0.08
SMG8-204ENST00000580498 RSRP1Q9BUV0 290 aa15.53■□□□□ 0.08
SMG8-204ENST00000580498 CCL28Q9NRJ3 127 aa15.53■□□□□ 0.08
SMG8-204ENST00000580498 RBFOX2O43251 390 aaKnown RBP eCLIP15.52■□□□□ 0.08
SMG8-204ENST00000580498 TNFSF12O43508 249 aa15.52■□□□□ 0.08
SMG8-204ENST00000580498 APOA1P02647 267 aa15.52■□□□□ 0.08
SMG8-204ENST00000580498 TGFBR1P36897 503 aa15.52■□□□□ 0.08
SMG8-204ENST00000580498 RPL27AP46776 148 aaKnown RBP15.52■□□□□ 0.08
SMG8-204ENST00000580498 RORCP51449 518 aa15.52■□□□□ 0.08
SMG8-204ENST00000580498 ERVK-16P61578 105 aa15.52■□□□□ 0.08
SMG8-204ENST00000580498 SSBP2P81877 361 aaPredicted RBP15.52■□□□□ 0.08
SMG8-204ENST00000580498 ATP5G2Q06055 141 aa15.52■□□□□ 0.08
SMG8-204ENST00000580498 RPEL1Q2QD12 228 aa15.52■□□□□ 0.08
SMG8-204ENST00000580498 AADACL3Q5VUY0 350 aa15.52■□□□□ 0.08
SMG8-204ENST00000580498 CMTM1Q8IZ96 169 aa15.52■□□□□ 0.08
SMG8-204ENST00000580498 ADAD2Q8NCV1 583 aaKnown RBP15.52■□□□□ 0.08
SMG8-204ENST00000580498 HRASLSQ9HDD0 168 aa15.52■□□□□ 0.08
SMG8-204ENST00000580498 COMMD3Q9UBI1 195 aa15.52■□□□□ 0.08
SMG8-204ENST00000580498 ZNF257Q9Y2Q1 563 aa15.52■□□□□ 0.08
SMG8-204ENST00000580498 SMAD5-AS1Q9Y6J3 95 aa15.52■□□□□ 0.08
SMG8-204ENST00000580498 HPRT1P00492 218 aa15.51■□□□□ 0.07
SMG8-204ENST00000580498 IGLV2-14P01704 120 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms