RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 PPIAL4AQ9Y536 164 aa10.49□□□□□ -0.73
CDK5RAP3-217ENST00000580287 IGHV3-43A0A0B4J1X8 118 aa10.49□□□□□ -0.73
CDK5RAP3-217ENST00000580287 A0A1W2PPE2 198 aa10.49□□□□□ -0.73
CDK5RAP3-217ENST00000580287 CHST1O43916 411 aa10.49□□□□□ -0.73
CDK5RAP3-217ENST00000580287 OR13C7P0DN81 318 aa10.49□□□□□ -0.73
CDK5RAP3-217ENST00000580287 IGHV3-43DP0DP04 118 aa10.49□□□□□ -0.73
CDK5RAP3-217ENST00000580287 SULT1A1P50225 295 aa10.49□□□□□ -0.73
CDK5RAP3-217ENST00000580287 GGACTQ9BVM4 153 aa10.49□□□□□ -0.73
CDK5RAP3-217ENST00000580287 OR2D2Q9H210 308 aa10.49□□□□□ -0.73
CDK5RAP3-217ENST00000580287 DUXBA0A1W2PPF3 345 aa10.48□□□□□ -0.73
CDK5RAP3-217ENST00000580287 CLDN1O95832 211 aa10.48□□□□□ -0.73
CDK5RAP3-217ENST00000580287 IGLV2-14P01704 120 aa10.48□□□□□ -0.73
CDK5RAP3-217ENST00000580287 HBZP02008 142 aa10.48□□□□□ -0.73
CDK5RAP3-217ENST00000580287 ODF3L1Q8IXM7 274 aa10.48□□□□□ -0.73
CDK5RAP3-217ENST00000580287 DRAM1Q8N682 238 aa10.48□□□□□ -0.73
CDK5RAP3-217ENST00000580287 GPR146Q96CH1 333 aa10.48□□□□□ -0.73
CDK5RAP3-217ENST00000580287 PLEKHF2Q9H8W4 249 aa10.48□□□□□ -0.73
CDK5RAP3-217ENST00000580287 UMAD1C9J7I0 102 aa10.48□□□□□ -0.73
CDK5RAP3-217ENST00000580287 NPIPB11E5RHQ5 1161 aa10.48□□□□□ -0.73
CDK5RAP3-217ENST00000580287 C9orf152Q5JTZ5 239 aa10.48□□□□□ -0.73
CDK5RAP3-217ENST00000580287 TEX36Q5VZQ5 186 aa10.48□□□□□ -0.73
CDK5RAP3-217ENST00000580287 ZNF788Q6ZQV5 615 aa10.48□□□□□ -0.73
CDK5RAP3-217ENST00000580287 OR5C1Q8NGR4 320 aa10.48□□□□□ -0.73
CDK5RAP3-217ENST00000580287 NRGNQ92686 78 aa10.48□□□□□ -0.73
CDK5RAP3-217ENST00000580287 SNX22Q96L94 193 aa10.48□□□□□ -0.73
CDK5RAP3-217ENST00000580287 LIN7CQ9NUP9 197 aaKnown RBP10.48□□□□□ -0.73
CDK5RAP3-217ENST00000580287 CACNG5Q9UF02 275 aa10.48□□□□□ -0.73
CDK5RAP3-217ENST00000580287 DMRT1Q9Y5R6 373 aa10.48□□□□□ -0.73
CDK5RAP3-217ENST00000580287 ABCA12Q86UK0 2595 aa10.48□□□□□ -0.73
CDK5RAP3-217ENST00000580287 NDUFB7P17568 137 aa10.47□□□□□ -0.73
CDK5RAP3-217ENST00000580287 SLC35E4Q6ICL7 350 aa10.47□□□□□ -0.73
CDK5RAP3-217ENST00000580287 TMEM252Q8N6L7 170 aa10.47□□□□□ -0.73
CDK5RAP3-217ENST00000580287 IL22RA2Q969J5 263 aa10.47□□□□□ -0.73
CDK5RAP3-217ENST00000580287 SLC25A31Q9H0C2 315 aa10.47□□□□□ -0.73
CDK5RAP3-217ENST00000580287 C19orf12Q9NSK7 152 aa10.47□□□□□ -0.73
CDK5RAP3-217ENST00000580287 LYRM2Q9NU23 88 aaPredicted RBP10.47□□□□□ -0.73
CDK5RAP3-217ENST00000580287 CTSZQ9UBR2 303 aa10.47□□□□□ -0.73
CDK5RAP3-217ENST00000580287 PTPN13Q12923 2485 aa10.47□□□□□ -0.73
CDK5RAP3-217ENST00000580287 NBPF19A0A087WUL8 3843 aa10.47□□□□□ -0.73
CDK5RAP3-217ENST00000580287 ODAMA1E959 279 aa10.47□□□□□ -0.73
CDK5RAP3-217ENST00000580287 ZNF729A6NN14 1252 aaPredicted RBP10.47□□□□□ -0.73
CDK5RAP3-217ENST00000580287 SLC25A17O43808 307 aa10.47□□□□□ -0.73
CDK5RAP3-217ENST00000580287 ATP6V0CP27449 155 aa10.47□□□□□ -0.73
CDK5RAP3-217ENST00000580287 RAB2AP61019 212 aa10.47□□□□□ -0.73
CDK5RAP3-217ENST00000580287 RHEBQ15382 184 aa10.47□□□□□ -0.73
CDK5RAP3-217ENST00000580287 BTNL3Q6UXE8 466 aa10.47□□□□□ -0.73
CDK5RAP3-217ENST00000580287 Q6ZRM9 215 aa10.47□□□□□ -0.73
CDK5RAP3-217ENST00000580287 COMMD1Q8N668 190 aa10.47□□□□□ -0.73
CDK5RAP3-217ENST00000580287 CD300LFQ8TDQ1 290 aa10.47□□□□□ -0.73
CDK5RAP3-217ENST00000580287 SDSLQ96GA7 329 aa10.47□□□□□ -0.73
CDK5RAP3-217ENST00000580287 TOLLIPQ9H0E2 274 aa10.47□□□□□ -0.73
CDK5RAP3-217ENST00000580287 ZNF665Q9H7R5 613 aa10.47□□□□□ -0.73
CDK5RAP3-217ENST00000580287 TRAV38-1A0A0B4J264 116 aa10.46□□□□□ -0.73
CDK5RAP3-217ENST00000580287 MGST3O14880 152 aa10.46□□□□□ -0.73
CDK5RAP3-217ENST00000580287 IGKV1-39P01597 117 aa10.46□□□□□ -0.73
CDK5RAP3-217ENST00000580287 IGKV1D-39P04432 117 aa10.46□□□□□ -0.73
CDK5RAP3-217ENST00000580287 IAPPP10997 89 aa10.46□□□□□ -0.73
CDK5RAP3-217ENST00000580287 DYNLT3P51808 116 aa10.46□□□□□ -0.73
CDK5RAP3-217ENST00000580287 ID3Q02535 119 aa10.46□□□□□ -0.73
CDK5RAP3-217ENST00000580287 C1orf87Q8N0U7 546 aa10.46□□□□□ -0.73
CDK5RAP3-217ENST00000580287 ARV1Q9H2C2 271 aa10.46□□□□□ -0.73
CDK5RAP3-217ENST00000580287 RAI1Q7Z5J4 1906 aaPredicted RBP10.46□□□□□ -0.74
CDK5RAP3-217ENST00000580287 YIF1AO95070 293 aa10.46□□□□□ -0.74
CDK5RAP3-217ENST00000580287 PPOXP50336 477 aa10.46□□□□□ -0.74
CDK5RAP3-217ENST00000580287 RAB5CP51148 216 aa10.46□□□□□ -0.74
CDK5RAP3-217ENST00000580287 ZNF816Q0VGE8 651 aaPredicted RBP10.46□□□□□ -0.74
CDK5RAP3-217ENST00000580287 DTX2Q86UW9 622 aa10.46□□□□□ -0.74
CDK5RAP3-217ENST00000580287 OR2G3Q8NGZ4 309 aa10.46□□□□□ -0.74
CDK5RAP3-217ENST00000580287 LEAP2Q969E1 77 aa10.46□□□□□ -0.74
CDK5RAP3-217ENST00000580287 GINS3Q9BRX5 216 aa10.46□□□□□ -0.74
CDK5RAP3-217ENST00000580287 RAB1BQ9H0U4 201 aa10.46□□□□□ -0.74
CDK5RAP3-217ENST00000580287 IFITM10A6NMD0 228 aa10.45□□□□□ -0.74
CDK5RAP3-217ENST00000580287 IFNA17P01571 189 aa10.45□□□□□ -0.74
CDK5RAP3-217ENST00000580287 SEC11BP0C7V7 166 aa10.45□□□□□ -0.74
CDK5RAP3-217ENST00000580287 TMEM267Q0VDI3 215 aaPredicted RBP10.45□□□□□ -0.74
CDK5RAP3-217ENST00000580287 ZNF266Q14584 549 aa10.45□□□□□ -0.74
CDK5RAP3-217ENST00000580287 C1QL4Q86Z23 238 aa10.45□□□□□ -0.74
CDK5RAP3-217ENST00000580287 YPEL4Q96NS1 127 aa10.45□□□□□ -0.74
CDK5RAP3-217ENST00000580287 PFDN5Q99471 154 aa10.45□□□□□ -0.74
CDK5RAP3-217ENST00000580287 MALRD1Q5VYJ5 2156 aa10.45□□□□□ -0.74
CDK5RAP3-217ENST00000580287 A0A1B0GU03 582 aa10.45□□□□□ -0.74
CDK5RAP3-217ENST00000580287 CLEC18AA5D8T8 446 aa10.45□□□□□ -0.74
CDK5RAP3-217ENST00000580287 MAS1LP35410 378 aa10.45□□□□□ -0.74
CDK5RAP3-217ENST00000580287 RPP30P78346 268 aaKnown RBP10.45□□□□□ -0.74
CDK5RAP3-217ENST00000580287 HAGHQ16775 308 aa10.45□□□□□ -0.74
CDK5RAP3-217ENST00000580287 PYY3Q5JQD4 70 aa10.45□□□□□ -0.74
CDK5RAP3-217ENST00000580287 SLC25A24Q6NUK1 477 aa10.45□□□□□ -0.74
CDK5RAP3-217ENST00000580287 TCF23Q7RTU1 214 aa10.45□□□□□ -0.74
CDK5RAP3-217ENST00000580287 ZNF645Q8N7E2 425 aa10.45□□□□□ -0.74
CDK5RAP3-217ENST00000580287 CLEC18CQ8NCF0 446 aa10.45□□□□□ -0.74
CDK5RAP3-217ENST00000580287 RBMXL1Q96E39 390 aaKnown RBP10.45□□□□□ -0.74
CDK5RAP3-217ENST00000580287 ABHD14BQ96IU4 210 aa10.45□□□□□ -0.74
CDK5RAP3-217ENST00000580287 C11orf1Q9H5F2 150 aa10.45□□□□□ -0.74
CDK5RAP3-217ENST00000580287 SLC25A10Q9UBX3 287 aaPredicted RBP10.45□□□□□ -0.74
CDK5RAP3-217ENST00000580287 CHTOPQ9Y3Y2 248 aaKnown RBP10.45□□□□□ -0.74
CDK5RAP3-217ENST00000580287 C15orf65H3BRN8 121 aa10.44□□□□□ -0.74
CDK5RAP3-217ENST00000580287 RAMP3O60896 148 aa10.44□□□□□ -0.74
CDK5RAP3-217ENST00000580287 MMP23AO75900 390 aa10.44□□□□□ -0.74
CDK5RAP3-217ENST00000580287 KRASP01116 189 aa10.44□□□□□ -0.74
CDK5RAP3-217ENST00000580287 IGKV1-5P01602 117 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms