RNA–Protein interactions for RNA: ENST00000578063.5

PRKCA-203, Transcript of protein kinase C alpha, humanhuman

TSL 1 (best)

Gene PRKCA, Length 1,733 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-203ENST00000578063 MINOS1Q5TGZ0 78 aa15.03■□□□□ -0
PRKCA-203ENST00000578063 LHX4Q969G2 390 aa15.03■□□□□ -0
PRKCA-203ENST00000578063 FLYWCH2Q96CP2 140 aaKnown RBP15.03■□□□□ -0
PRKCA-203ENST00000578063 RHOVQ96L33 236 aa15.03■□□□□ -0
PRKCA-203ENST00000578063 TMEM140Q9NV12 185 aa15.03■□□□□ -0
PRKCA-203ENST00000578063 MINOS1-NBL1R4GNA1 71 aa15.03■□□□□ -0
PRKCA-203ENST00000578063 IGHV1-3A0A0C4DH29 117 aa15.02□□□□□ -0.01
PRKCA-203ENST00000578063 S100A11P31949 105 aa15.02□□□□□ -0.01
PRKCA-203ENST00000578063 POLR2GP62487 172 aaKnown RBP eCLIP15.02□□□□□ -0.01
PRKCA-203ENST00000578063 TMUB2Q71RG4 321 aa15.02□□□□□ -0.01
PRKCA-203ENST00000578063 SSX9Q7RTT3 188 aa15.02□□□□□ -0.01
PRKCA-203ENST00000578063 KCNRGQ8N5I3 272 aa15.02□□□□□ -0.01
PRKCA-203ENST00000578063 OR4C13Q8NGP0 309 aa15.02□□□□□ -0.01
PRKCA-203ENST00000578063 AQP10Q96PS8 301 aa15.02□□□□□ -0.01
PRKCA-203ENST00000578063 ARHGAP32A7KAX9 2087 aa15.01□□□□□ -0.01
PRKCA-203ENST00000578063 SHOXO15266 292 aa15.01□□□□□ -0.01
PRKCA-203ENST00000578063 SSSCA1O60232 199 aa15.01□□□□□ -0.01
PRKCA-203ENST00000578063 UBE2E1P51965 193 aa15.01□□□□□ -0.01
PRKCA-203ENST00000578063 LOXL1Q08397 574 aaPredicted RBP15.01□□□□□ -0.01
PRKCA-203ENST00000578063 VKORC1L1Q8N0U8 176 aa15.01□□□□□ -0.01
PRKCA-203ENST00000578063 OR8H3Q8N146 312 aa15.01□□□□□ -0.01
PRKCA-203ENST00000578063 HARBI1Q96MB7 349 aa15.01□□□□□ -0.01
PRKCA-203ENST00000578063 GON7Q9BXV9 100 aa15.01□□□□□ -0.01
PRKCA-203ENST00000578063 ARL6Q9H0F7 186 aa15.01□□□□□ -0.01
PRKCA-203ENST00000578063 CACFD1Q9UGQ2 172 aa15.01□□□□□ -0.01
PRKCA-203ENST00000578063 NAV2Q8IVL1 2488 aa15.01□□□□□ -0.01
PRKCA-203ENST00000578063 APCP25054 2843 aa15□□□□□ -0.01
PRKCA-203ENST00000578063 OOSP1A8MZH6 123 aa15□□□□□ -0.01
PRKCA-203ENST00000578063 RBMXL2O75526 392 aaKnown RBP15□□□□□ -0.01
PRKCA-203ENST00000578063 NXPH3O95157 252 aa15□□□□□ -0.01
PRKCA-203ENST00000578063 P2RY1P47900 373 aa15□□□□□ -0.01
PRKCA-203ENST00000578063 AP2S1P53680 142 aaPredicted RBP15□□□□□ -0.01
PRKCA-203ENST00000578063 LGALS4P56470 323 aa15□□□□□ -0.01
PRKCA-203ENST00000578063 AARDQ4LEZ3 155 aa15□□□□□ -0.01
PRKCA-203ENST00000578063 OR4A47Q6IF82 309 aa15□□□□□ -0.01
PRKCA-203ENST00000578063 MAGT1Q9H0U3 335 aa15□□□□□ -0.01
PRKCA-203ENST00000578063 C11orf1Q9H5F2 150 aa15□□□□□ -0.01
PRKCA-203ENST00000578063 HSPB7Q9UBY9 170 aa15□□□□□ -0.01
PRKCA-203ENST00000578063 TBL2Q9Y4P3 447 aaKnown RBP15□□□□□ -0.01
PRKCA-203ENST00000578063 TRAV20A0A0B4J274 112 aa15□□□□□ -0.01
PRKCA-203ENST00000578063 A0A1W2PPI3 338 aa15□□□□□ -0.01
PRKCA-203ENST00000578063 MED6O75586 246 aa15□□□□□ -0.01
PRKCA-203ENST00000578063 OR9G9P0C7N8 305 aa15□□□□□ -0.01
PRKCA-203ENST00000578063 VAMP2P63027 116 aa15□□□□□ -0.01
PRKCA-203ENST00000578063 TNFRSF9Q07011 255 aa15□□□□□ -0.01
PRKCA-203ENST00000578063 OPCMLQ14982 345 aa15□□□□□ -0.01
PRKCA-203ENST00000578063 MOB3BQ86TA1 216 aa15□□□□□ -0.01
PRKCA-203ENST00000578063 PDZD9Q8IXQ8 264 aa15□□□□□ -0.01
PRKCA-203ENST00000578063 OR4A16Q8NH70 328 aa15□□□□□ -0.01
PRKCA-203ENST00000578063 RAB40CQ96S21 281 aa15□□□□□ -0.01
PRKCA-203ENST00000578063 SYNGR2O43760 224 aa14.99□□□□□ -0.01
PRKCA-203ENST00000578063 GATA3P23771 443 aa14.99□□□□□ -0.01
PRKCA-203ENST00000578063 LDLRAD2Q5SZI1 272 aa14.99□□□□□ -0.01
PRKCA-203ENST00000578063 CCDC144NLQ6NUI1 221 aa14.99□□□□□ -0.01
PRKCA-203ENST00000578063 MS4A7Q9GZW8 240 aaPredicted RBP14.99□□□□□ -0.01
PRKCA-203ENST00000578063 SLA2Q9H6Q3 261 aa14.99□□□□□ -0.01
PRKCA-203ENST00000578063 BET1LQ9NYM9 111 aa14.99□□□□□ -0.01
PRKCA-203ENST00000578063 MSGN1A6NI15 193 aa14.98□□□□□ -0.01
PRKCA-203ENST00000578063 CHST1O43916 411 aa14.98□□□□□ -0.01
PRKCA-203ENST00000578063 TSC22D2O75157 780 aa14.98□□□□□ -0.01
PRKCA-203ENST00000578063 HKR1P10072 659 aa14.98□□□□□ -0.01
PRKCA-203ENST00000578063 RPL12P30050 165 aaKnown RBP14.98□□□□□ -0.01
PRKCA-203ENST00000578063 RELBQ01201 579 aa14.98□□□□□ -0.01
PRKCA-203ENST00000578063 LHFPL4Q7Z7J7 247 aa14.98□□□□□ -0.01
PRKCA-203ENST00000578063 LINC01356Q8N9X3 169 aa14.98□□□□□ -0.01
PRKCA-203ENST00000578063 REG4Q9BYZ8 158 aa14.98□□□□□ -0.01
PRKCA-203ENST00000578063 KANTRA0A1W2PQU2 76 aa14.97□□□□□ -0.01
PRKCA-203ENST00000578063 A0A1W2PRD5 423 aa14.97□□□□□ -0.01
PRKCA-203ENST00000578063 A0A1W2PRF3 423 aa14.97□□□□□ -0.01
PRKCA-203ENST00000578063 A0A1W2PRM7 423 aa14.97□□□□□ -0.01
PRKCA-203ENST00000578063 C15orf61A6NNL5 157 aa14.97□□□□□ -0.01
PRKCA-203ENST00000578063 SRRM4A7MD48 611 aaKnown RBP14.97□□□□□ -0.01
PRKCA-203ENST00000578063 KCNAB3O43448 404 aa14.97□□□□□ -0.01
PRKCA-203ENST00000578063 GPR137BO60478 399 aa14.97□□□□□ -0.01
PRKCA-203ENST00000578063 LGALS7P47929 136 aa14.97□□□□□ -0.01
PRKCA-203ENST00000578063 OR2B8PP59922 312 aa14.97□□□□□ -0.01
PRKCA-203ENST00000578063 UBE2KP61086 200 aa14.97□□□□□ -0.01
PRKCA-203ENST00000578063 RPS16P62249 146 aaKnown RBP14.97□□□□□ -0.01
PRKCA-203ENST00000578063 GPR157Q5UAW9 335 aa14.97□□□□□ -0.01
PRKCA-203ENST00000578063 ZNF429Q86V71 674 aa14.97□□□□□ -0.01
PRKCA-203ENST00000578063 OR52E5Q8NH55 327 aa14.97□□□□□ -0.01
PRKCA-203ENST00000578063 VSTM2AQ8TAG5 236 aa14.97□□□□□ -0.01
PRKCA-203ENST00000578063 ZC4H2Q9NQZ6 224 aa14.97□□□□□ -0.01
PRKCA-203ENST00000578063 LYRM2Q9NU23 88 aaPredicted RBP14.97□□□□□ -0.01
PRKCA-203ENST00000578063 WSB1Q9Y6I7 421 aa14.97□□□□□ -0.01
PRKCA-203ENST00000578063 ASH1LQ9NR48 2969 aaKnown RBP14.97□□□□□ -0.01
PRKCA-203ENST00000578063 IGHV3-72A0A0B4J1Y9 119 aa14.97□□□□□ -0.01
PRKCA-203ENST00000578063 BCL2L11O43521 198 aa14.97□□□□□ -0.01
PRKCA-203ENST00000578063 IL6RP08887 468 aaPredicted RBP14.97□□□□□ -0.01
PRKCA-203ENST00000578063 SAA1P0DJI8 122 aaPredicted RBP14.97□□□□□ -0.01
PRKCA-203ENST00000578063 RPL23AP62750 156 aaKnown RBP14.97□□□□□ -0.01
PRKCA-203ENST00000578063 HABP2Q14520 560 aaPredicted RBP14.97□□□□□ -0.01
PRKCA-203ENST00000578063 PUSL1Q8N0Z8 303 aaKnown RBP14.97□□□□□ -0.01
PRKCA-203ENST00000578063 OR2C3Q8N628 320 aa14.97□□□□□ -0.01
PRKCA-203ENST00000578063 QTRT1Q9BXR0 403 aaKnown RBP14.97□□□□□ -0.01
PRKCA-203ENST00000578063 PRNDQ9UKY0 176 aa14.97□□□□□ -0.01
PRKCA-203ENST00000578063 FOXA2Q9Y261 457 aaPredicted RBP14.97□□□□□ -0.01
PRKCA-203ENST00000578063 HILPDAQ9Y5L2 63 aa14.97□□□□□ -0.01
PRKCA-203ENST00000578063 AUP1Q9Y679 476 aa14.97□□□□□ -0.01
PRKCA-203ENST00000578063 ABCA2Q9BZC7 2435 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms