RNA–Protein interactions for RNA: ENST00000575431.1

CCDC40-214, Transcript of coiled-coil domain containing 40, humanhuman

TSL 3

Gene CCDC40, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-214ENST00000575431 OR4A5Q8NH83 315 aa7.55□□□□□ -1.2
CCDC40-214ENST00000575431 WIPF2Q8TF74 440 aaPredicted RBP7.55□□□□□ -1.2
CCDC40-214ENST00000575431 S100ZQ8WXG8 99 aa7.55□□□□□ -1.2
CCDC40-214ENST00000575431 TRIM63Q969Q1 353 aa7.55□□□□□ -1.2
CCDC40-214ENST00000575431 TMEM68Q96MH6 324 aa7.55□□□□□ -1.2
CCDC40-214ENST00000575431 SRRQ9GZT4 340 aa7.55□□□□□ -1.2
CCDC40-214ENST00000575431 SLC2A9Q9NRM0 540 aa7.55□□□□□ -1.2
CCDC40-214ENST00000575431 PTTG2Q9NZH5 202 aa7.55□□□□□ -1.2
CCDC40-214ENST00000575431 M0QZ24 198 aa7.54□□□□□ -1.2
CCDC40-214ENST00000575431 ACTL6BO94805 426 aa7.54□□□□□ -1.2
CCDC40-214ENST00000575431 OR2A4O95047 310 aa7.54□□□□□ -1.2
CCDC40-214ENST00000575431 RLN1P04808 185 aa7.54□□□□□ -1.2
CCDC40-214ENST00000575431 CTSDP07339 412 aaPredicted RBP7.54□□□□□ -1.2
CCDC40-214ENST00000575431 FGF2P09038 288 aa7.54□□□□□ -1.2
CCDC40-214ENST00000575431 NQO2P16083 231 aa7.54□□□□□ -1.2
CCDC40-214ENST00000575431 CRIP2P52943 208 aaPredicted RBP7.54□□□□□ -1.2
CCDC40-214ENST00000575431 CD83Q01151 205 aa7.54□□□□□ -1.2
CCDC40-214ENST00000575431 KLF9Q13886 244 aaPredicted RBP7.54□□□□□ -1.2
CCDC40-214ENST00000575431 POU2AF1Q16633 256 aa7.54□□□□□ -1.2
CCDC40-214ENST00000575431 TMEM95Q3KNT9 176 aa7.54□□□□□ -1.2
CCDC40-214ENST00000575431 OR2B11Q5JQS5 317 aa7.54□□□□□ -1.2
CCDC40-214ENST00000575431 TRIQKQ629K1 86 aa7.54□□□□□ -1.2
CCDC40-214ENST00000575431 TEX38Q6PEX7 206 aa7.54□□□□□ -1.2
CCDC40-214ENST00000575431 NDUFA11Q86Y39 141 aa7.54□□□□□ -1.2
CCDC40-214ENST00000575431 CADM3Q8N126 398 aa7.54□□□□□ -1.2
CCDC40-214ENST00000575431 OR4C16Q8NGL9 310 aa7.54□□□□□ -1.2
CCDC40-214ENST00000575431 OR51H1Q8NH63 302 aa7.54□□□□□ -1.2
CCDC40-214ENST00000575431 RHOVQ96L33 236 aa7.54□□□□□ -1.2
CCDC40-214ENST00000575431 OR2A7Q96R45 310 aa7.54□□□□□ -1.2
CCDC40-214ENST00000575431 HSPB9Q9BQS6 159 aa7.54□□□□□ -1.2
CCDC40-214ENST00000575431 ZFP57Q9NU63 452 aa7.54□□□□□ -1.2
CCDC40-214ENST00000575431 MCUBQ9NWR8 336 aa7.54□□□□□ -1.2
CCDC40-214ENST00000575431 COMMD9Q9P000 198 aa7.54□□□□□ -1.2
CCDC40-214ENST00000575431 COPZ2Q9P299 210 aa7.54□□□□□ -1.2
CCDC40-214ENST00000575431 C14orf166Q9Y224 244 aaKnown RBP7.54□□□□□ -1.2
CCDC40-214ENST00000575431 FBN1P35555 2871 aaKnown RBP7.53□□□□□ -1.2
CCDC40-214ENST00000575431 TRAV41A0A0B4J266 112 aa7.53□□□□□ -1.2
CCDC40-214ENST00000575431 PIGBOS1A0A0B4J2F0 54 aa7.53□□□□□ -1.2
CCDC40-214ENST00000575431 NAP1L6A6NFF2 107 aa7.53□□□□□ -1.2
CCDC40-214ENST00000575431 LINC01548A6NM66 108 aa7.53□□□□□ -1.2
CCDC40-214ENST00000575431 SRRM4A7MD48 611 aaKnown RBP7.53□□□□□ -1.2
CCDC40-214ENST00000575431 FCN1O00602 326 aa7.53□□□□□ -1.2
CCDC40-214ENST00000575431 ATP6V0E1O15342 81 aa7.53□□□□□ -1.2
CCDC40-214ENST00000575431 MPPED1O15442 326 aa7.53□□□□□ -1.2
CCDC40-214ENST00000575431 RAMP3O60896 148 aa7.53□□□□□ -1.2
CCDC40-214ENST00000575431 ATG12O94817 140 aa7.53□□□□□ -1.2
CCDC40-214ENST00000575431 CNIH1O95406 144 aa7.53□□□□□ -1.2
CCDC40-214ENST00000575431 CA2P00918 260 aa7.53□□□□□ -1.2
CCDC40-214ENST00000575431 ELANEP08246 267 aa7.53□□□□□ -1.2
CCDC40-214ENST00000575431 SAA1P0DJI8 122 aaPredicted RBP7.53□□□□□ -1.2
CCDC40-214ENST00000575431 RPA2P15927 270 aa7.53□□□□□ -1.2
CCDC40-214ENST00000575431 CD40LGP29965 261 aa7.53□□□□□ -1.2
CCDC40-214ENST00000575431 SLC6A1P30531 599 aa7.53□□□□□ -1.2
CCDC40-214ENST00000575431 MAS1LP35410 378 aa7.53□□□□□ -1.2
CCDC40-214ENST00000575431 PPP5CP53041 499 aa7.53□□□□□ -1.2
CCDC40-214ENST00000575431 PIGPP57054 158 aa7.53□□□□□ -1.2
CCDC40-214ENST00000575431 BRWD1-AS2P59051 145 aa7.53□□□□□ -1.2
CCDC40-214ENST00000575431 KRTAP10-3P60369 221 aa7.53□□□□□ -1.2
CCDC40-214ENST00000575431 ERVK-16P61578 105 aa7.53□□□□□ -1.2
CCDC40-214ENST00000575431 FXYD3Q14802 87 aa7.53□□□□□ -1.2
CCDC40-214ENST00000575431 PRSS8Q16651 343 aa7.53□□□□□ -1.2
CCDC40-214ENST00000575431 PHLDA2Q53GA4 152 aa7.53□□□□□ -1.2
CCDC40-214ENST00000575431 AKIRIN2Q53H80 203 aa7.53□□□□□ -1.2
CCDC40-214ENST00000575431 ZNF57Q68EA5 555 aaPredicted RBP7.53□□□□□ -1.2
CCDC40-214ENST00000575431 IDO2Q6ZQW0 420 aa7.53□□□□□ -1.2
CCDC40-214ENST00000575431 TBC1D26Q86UD7 250 aa7.53□□□□□ -1.2
CCDC40-214ENST00000575431 PUSL1Q8N0Z8 303 aaKnown RBP7.53□□□□□ -1.2
CCDC40-214ENST00000575431 OR51S1Q8NGJ8 323 aa7.53□□□□□ -1.2
CCDC40-214ENST00000575431 TMEM167AQ8TBQ9 72 aa7.53□□□□□ -1.2
CCDC40-214ENST00000575431 ABHD5Q8WTS1 349 aa7.53□□□□□ -1.2
CCDC40-214ENST00000575431 ARPC1AQ92747 370 aa7.53□□□□□ -1.2
CCDC40-214ENST00000575431 NOL4LQ96MY1 436 aaPredicted RBP7.53□□□□□ -1.2
CCDC40-214ENST00000575431 CLCC1Q96S66 551 aa7.53□□□□□ -1.2
CCDC40-214ENST00000575431 GPHA2Q96T91 129 aa7.53□□□□□ -1.2
CCDC40-214ENST00000575431 SLC25A21Q9BQT8 299 aaPredicted RBP7.53□□□□□ -1.2
CCDC40-214ENST00000575431 HRASLSQ9HDD0 168 aa7.53□□□□□ -1.2
CCDC40-214ENST00000575431 PARP11Q9NR21 331 aa7.53□□□□□ -1.2
CCDC40-214ENST00000575431 BET1LQ9NYM9 111 aa7.53□□□□□ -1.2
CCDC40-214ENST00000575431 GPR132Q9UNW8 380 aa7.53□□□□□ -1.2
CCDC40-214ENST00000575431 NUBP2Q9Y5Y2 271 aa7.53□□□□□ -1.2
CCDC40-214ENST00000575431 TCRBV4S1A1TA0A5B7 111 aa7.52□□□□□ -1.21
CCDC40-214ENST00000575431 CENPXA8MT69 81 aa7.52□□□□□ -1.21
CCDC40-214ENST00000575431 H0Y980 276 aa7.52□□□□□ -1.21
CCDC40-214ENST00000575431 KBTBD11O94819 623 aa7.52□□□□□ -1.21
CCDC40-214ENST00000575431 IGHG4P01861 327 aa7.52□□□□□ -1.21
CCDC40-214ENST00000575431 SERPINE2P07093 398 aa7.52□□□□□ -1.21
CCDC40-214ENST00000575431 PPIFP30405 207 aaKnown RBP7.52□□□□□ -1.21
CCDC40-214ENST00000575431 LPAR6P43657 344 aa7.52□□□□□ -1.21
CCDC40-214ENST00000575431 CFHR3Q02985 330 aa7.52□□□□□ -1.21
CCDC40-214ENST00000575431 SRSF4Q08170 494 aaKnown RBP7.52□□□□□ -1.21
CCDC40-214ENST00000575431 FOXE3Q13461 319 aa7.52□□□□□ -1.21
CCDC40-214ENST00000575431 C2orf68Q2NKX9 166 aa7.52□□□□□ -1.21
CCDC40-214ENST00000575431 FAAP20Q6NZ36 180 aa7.52□□□□□ -1.21
CCDC40-214ENST00000575431 ZNF329Q86UD4 541 aa7.52□□□□□ -1.21
CCDC40-214ENST00000575431 OR5M8Q8NGP6 311 aa7.52□□□□□ -1.21
CCDC40-214ENST00000575431 OR13C8Q8NGS7 320 aa7.52□□□□□ -1.21
CCDC40-214ENST00000575431 MARCH1Q8TCQ1 289 aa7.52□□□□□ -1.21
CCDC40-214ENST00000575431 R3HDM4Q96D70 268 aa7.52□□□□□ -1.21
CCDC40-214ENST00000575431 RBMXL1Q96E39 390 aaKnown RBP7.52□□□□□ -1.21
CCDC40-214ENST00000575431 C7orf50Q9BRJ6 194 aaKnown RBP7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms