RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 CX3CL1P78423 397 aa10.07□□□□□ -0.8
TRAPPC1-206ENST00000573989 ZNF45Q02386 682 aa10.07□□□□□ -0.8
TRAPPC1-206ENST00000573989 C2orf68Q2NKX9 166 aa10.07□□□□□ -0.8
TRAPPC1-206ENST00000573989 TEX38Q6PEX7 206 aa10.07□□□□□ -0.8
TRAPPC1-206ENST00000573989 LINC00299Q6ZSB3 139 aa10.07□□□□□ -0.8
TRAPPC1-206ENST00000573989 LHFPL1Q86WI0 220 aa10.07□□□□□ -0.8
TRAPPC1-206ENST00000573989 C11orf44Q8N8P7 122 aa10.07□□□□□ -0.8
TRAPPC1-206ENST00000573989 GDPD1Q8N9F7 314 aa10.07□□□□□ -0.8
TRAPPC1-206ENST00000573989 CCDC71LQ8N9Z2 235 aa10.07□□□□□ -0.8
TRAPPC1-206ENST00000573989 OR4D10Q8NGI6 311 aa10.07□□□□□ -0.8
TRAPPC1-206ENST00000573989 OR4C16Q8NGL9 310 aa10.07□□□□□ -0.8
TRAPPC1-206ENST00000573989 WIPF2Q8TF74 440 aaPredicted RBP10.07□□□□□ -0.8
TRAPPC1-206ENST00000573989 SCGB3A2Q96PL1 93 aa10.07□□□□□ -0.8
TRAPPC1-206ENST00000573989 CLCC1Q96S66 551 aa10.07□□□□□ -0.8
TRAPPC1-206ENST00000573989 MCUBQ9NWR8 336 aa10.07□□□□□ -0.8
TRAPPC1-206ENST00000573989 LINC00527Q9UJ94 153 aa10.07□□□□□ -0.8
TRAPPC1-206ENST00000573989 ANK2Q01484 3957 aa10.06□□□□□ -0.8
TRAPPC1-206ENST00000573989 TCRBV4S1A1TA0A5B7 111 aa10.06□□□□□ -0.8
TRAPPC1-206ENST00000573989 LINC01548A6NM66 108 aa10.06□□□□□ -0.8
TRAPPC1-206ENST00000573989 SRRM4A7MD48 611 aaKnown RBP10.06□□□□□ -0.8
TRAPPC1-206ENST00000573989 ATP6V0E1O15342 81 aa10.06□□□□□ -0.8
TRAPPC1-206ENST00000573989 CD28P10747 220 aa10.06□□□□□ -0.8
TRAPPC1-206ENST00000573989 NQO2P16083 231 aa10.06□□□□□ -0.8
TRAPPC1-206ENST00000573989 F2RP25116 425 aa10.06□□□□□ -0.8
TRAPPC1-206ENST00000573989 PPP5CP53041 499 aa10.06□□□□□ -0.8
TRAPPC1-206ENST00000573989 TAS2R31P59538 309 aa10.06□□□□□ -0.8
TRAPPC1-206ENST00000573989 ERVK-16P61578 105 aa10.06□□□□□ -0.8
TRAPPC1-206ENST00000573989 GNB1P62873 340 aa10.06□□□□□ -0.8
TRAPPC1-206ENST00000573989 SURF2Q15527 256 aaPredicted RBP10.06□□□□□ -0.8
TRAPPC1-206ENST00000573989 ZNF79Q15937 498 aa10.06□□□□□ -0.8
TRAPPC1-206ENST00000573989 PHLDA2Q53GA4 152 aa10.06□□□□□ -0.8
TRAPPC1-206ENST00000573989 TRIQKQ629K1 86 aa10.06□□□□□ -0.8
TRAPPC1-206ENST00000573989 ZNF329Q86UD4 541 aa10.06□□□□□ -0.8
TRAPPC1-206ENST00000573989 NDUFA11Q86Y39 141 aa10.06□□□□□ -0.8
TRAPPC1-206ENST00000573989 MMD2Q8IY49 270 aa10.06□□□□□ -0.8
TRAPPC1-206ENST00000573989 ARPC1AQ92747 370 aa10.06□□□□□ -0.8
TRAPPC1-206ENST00000573989 RHOVQ96L33 236 aa10.06□□□□□ -0.8
TRAPPC1-206ENST00000573989 GPHA2Q96T91 129 aa10.06□□□□□ -0.8
TRAPPC1-206ENST00000573989 PLEKHA2Q9HB19 425 aa10.06□□□□□ -0.8
TRAPPC1-206ENST00000573989 SLC2A9Q9NRM0 540 aa10.06□□□□□ -0.8
TRAPPC1-206ENST00000573989 FAM212BQ9NTI7 297 aaPredicted RBP10.06□□□□□ -0.8
TRAPPC1-206ENST00000573989 COMMD9Q9P000 198 aa10.06□□□□□ -0.8
TRAPPC1-206ENST00000573989 COPZ2Q9P299 210 aa10.06□□□□□ -0.8
TRAPPC1-206ENST00000573989 C14orf166Q9Y224 244 aaKnown RBP10.06□□□□□ -0.8
TRAPPC1-206ENST00000573989 TSSC4Q9Y5U2 329 aaPredicted RBP10.06□□□□□ -0.8
TRAPPC1-206ENST00000573989 TRAV41A0A0B4J266 112 aa10.05□□□□□ -0.8
TRAPPC1-206ENST00000573989 FCN1O00602 326 aa10.05□□□□□ -0.8
TRAPPC1-206ENST00000573989 RAMP3O60896 148 aa10.05□□□□□ -0.8
TRAPPC1-206ENST00000573989 OR2A4O95047 310 aa10.05□□□□□ -0.8
TRAPPC1-206ENST00000573989 CRYGBP07316 175 aa10.05□□□□□ -0.8
TRAPPC1-206ENST00000573989 ELANEP08246 267 aa10.05□□□□□ -0.8
TRAPPC1-206ENST00000573989 ZNF735P0CB33 412 aa10.05□□□□□ -0.8
TRAPPC1-206ENST00000573989 SAA1P0DJI8 122 aaPredicted RBP10.05□□□□□ -0.8
TRAPPC1-206ENST00000573989 CD40LGP29965 261 aa10.05□□□□□ -0.8
TRAPPC1-206ENST00000573989 PIGPP57054 158 aa10.05□□□□□ -0.8
TRAPPC1-206ENST00000573989 RND3P61587 244 aa10.05□□□□□ -0.8
TRAPPC1-206ENST00000573989 CD83Q01151 205 aa10.05□□□□□ -0.8
TRAPPC1-206ENST00000573989 FXYD3Q14802 87 aa10.05□□□□□ -0.8
TRAPPC1-206ENST00000573989 CNPY1Q3B7I2 92 aa10.05□□□□□ -0.8
TRAPPC1-206ENST00000573989 CXorf66Q5JRM2 361 aaPredicted RBP10.05□□□□□ -0.8
TRAPPC1-206ENST00000573989 KHDC1LQ5JSQ8 128 aa10.05□□□□□ -0.8
TRAPPC1-206ENST00000573989 ZNF57Q68EA5 555 aaPredicted RBP10.05□□□□□ -0.8
TRAPPC1-206ENST00000573989 FAAP20Q6NZ36 180 aa10.05□□□□□ -0.8
TRAPPC1-206ENST00000573989 IDO2Q6ZQW0 420 aa10.05□□□□□ -0.8
TRAPPC1-206ENST00000573989 TBC1D26Q86UD7 250 aa10.05□□□□□ -0.8
TRAPPC1-206ENST00000573989 OR51S1Q8NGJ8 323 aa10.05□□□□□ -0.8
TRAPPC1-206ENST00000573989 OR4A5Q8NH83 315 aa10.05□□□□□ -0.8
TRAPPC1-206ENST00000573989 TMEM68Q96MH6 324 aa10.05□□□□□ -0.8
TRAPPC1-206ENST00000573989 OR2A7Q96R45 310 aa10.05□□□□□ -0.8
TRAPPC1-206ENST00000573989 SRRQ9GZT4 340 aa10.05□□□□□ -0.8
TRAPPC1-206ENST00000573989 SLC2A8Q9NY64 477 aa10.05□□□□□ -0.8
TRAPPC1-206ENST00000573989 TNCP24821 2201 aa10.05□□□□□ -0.8
TRAPPC1-206ENST00000573989 B3GALNT1O75752 331 aa10.04□□□□□ -0.8
TRAPPC1-206ENST00000573989 KBTBD11O94819 623 aa10.04□□□□□ -0.8
TRAPPC1-206ENST00000573989 CTSDP07339 412 aaPredicted RBP10.04□□□□□ -0.8
TRAPPC1-206ENST00000573989 MAS1LP35410 378 aa10.04□□□□□ -0.8
TRAPPC1-206ENST00000573989 CRIP2P52943 208 aaPredicted RBP10.04□□□□□ -0.8
TRAPPC1-206ENST00000573989 BRWD1-AS2P59051 145 aa10.04□□□□□ -0.8
TRAPPC1-206ENST00000573989 FOXE3Q13461 319 aa10.04□□□□□ -0.8
TRAPPC1-206ENST00000573989 TNXAQ16473 311 aa10.04□□□□□ -0.8
TRAPPC1-206ENST00000573989 PRSS8Q16651 343 aa10.04□□□□□ -0.8
TRAPPC1-206ENST00000573989 ECSCRQ19T08 205 aa10.04□□□□□ -0.8
TRAPPC1-206ENST00000573989 AKIRIN2Q53H80 203 aa10.04□□□□□ -0.8
TRAPPC1-206ENST00000573989 TMEM65Q6PI78 240 aa10.04□□□□□ -0.8
TRAPPC1-206ENST00000573989 SSX9Q7RTT3 188 aa10.04□□□□□ -0.8
TRAPPC1-206ENST00000573989 DMBX1Q8NFW5 382 aa10.04□□□□□ -0.8
TRAPPC1-206ENST00000573989 MARCH1Q8TCQ1 289 aa10.04□□□□□ -0.8
TRAPPC1-206ENST00000573989 TRIM63Q969Q1 353 aa10.04□□□□□ -0.8
TRAPPC1-206ENST00000573989 CITED2Q99967 270 aaPredicted RBP10.04□□□□□ -0.8
TRAPPC1-206ENST00000573989 TPSG1Q9NRR2 321 aa10.04□□□□□ -0.8
TRAPPC1-206ENST00000573989 ZFP57Q9NU63 452 aa10.04□□□□□ -0.8
TRAPPC1-206ENST00000573989 BET1LQ9NYM9 111 aa10.04□□□□□ -0.8
TRAPPC1-206ENST00000573989 WSB1Q9Y6I7 421 aa10.04□□□□□ -0.8
TRAPPC1-206ENST00000573989 MPPED1O15442 326 aa10.03□□□□□ -0.8
TRAPPC1-206ENST00000573989 ATG12O94817 140 aa10.03□□□□□ -0.8
TRAPPC1-206ENST00000573989 IGHG4P01861 327 aa10.03□□□□□ -0.8
TRAPPC1-206ENST00000573989 SERPINE2P07093 398 aa10.03□□□□□ -0.8
TRAPPC1-206ENST00000573989 RPA2P15927 270 aa10.03□□□□□ -0.8
TRAPPC1-206ENST00000573989 LPAR6P43657 344 aa10.03□□□□□ -0.8
TRAPPC1-206ENST00000573989 KLF9Q13886 244 aaPredicted RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms