RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 RPS11P62280 158 aaKnown RBP eCLIP3.75□□□□□ -1.81
TOPBP1-210ENST00000572787 FKBP1AP62942 108 aaKnown RBP3.75□□□□□ -1.81
TOPBP1-210ENST00000572787 PSG7Q13046 419 aa3.75□□□□□ -1.81
TOPBP1-210ENST00000572787 RSPO1Q2MKA7 263 aaPredicted RBP3.75□□□□□ -1.81
TOPBP1-210ENST00000572787 LINC00303Q3SY05 128 aa3.75□□□□□ -1.81
TOPBP1-210ENST00000572787 UNQ9165/PRO28630Q6UXU0 137 aa3.75□□□□□ -1.81
TOPBP1-210ENST00000572787 MOB1BQ7L9L4 216 aa3.75□□□□□ -1.81
TOPBP1-210ENST00000572787 HSD17B13Q7Z5P4 300 aaPredicted RBP3.75□□□□□ -1.81
TOPBP1-210ENST00000572787 MKXQ8IYA7 352 aa3.75□□□□□ -1.81
TOPBP1-210ENST00000572787 LINC01555Q8NAE3 123 aa3.75□□□□□ -1.81
TOPBP1-210ENST00000572787 OR4C16Q8NGL9 310 aa3.75□□□□□ -1.81
TOPBP1-210ENST00000572787 OR1J4Q8NGS1 313 aa3.75□□□□□ -1.81
TOPBP1-210ENST00000572787 MRPL30Q8TCC3 161 aaKnown RBP3.75□□□□□ -1.81
TOPBP1-210ENST00000572787 HIST1H2BAQ96A08 127 aa3.75□□□□□ -1.81
TOPBP1-210ENST00000572787 ZNF524Q96C55 264 aa3.75□□□□□ -1.81
TOPBP1-210ENST00000572787 DISP2A7MBM2 1401 aa3.75□□□□□ -1.81
TOPBP1-210ENST00000572787 THSD7AQ9UPZ6 1657 aa3.75□□□□□ -1.81
TOPBP1-210ENST00000572787 NEO1Q92859 1461 aa3.74□□□□□ -1.81
TOPBP1-210ENST00000572787 FER1L5A0AVI2 2057 aa3.74□□□□□ -1.81
TOPBP1-210ENST00000572787 IGLV8-61A0A075B6I0 122 aa3.74□□□□□ -1.81
TOPBP1-210ENST00000572787 TRAV9-1A0A075B6T8 112 aa3.74□□□□□ -1.81
TOPBP1-210ENST00000572787 KRBOX1C9JBD0 128 aa3.74□□□□□ -1.81
TOPBP1-210ENST00000572787 SOCS2O14508 198 aa3.74□□□□□ -1.81
TOPBP1-210ENST00000572787 RBFOX2O43251 390 aaKnown RBP eCLIP3.74□□□□□ -1.81
TOPBP1-210ENST00000572787 FSTL3O95633 263 aa3.74□□□□□ -1.81
TOPBP1-210ENST00000572787 IGLV3-27P01718 113 aa3.74□□□□□ -1.81
TOPBP1-210ENST00000572787 APODP05090 189 aa3.74□□□□□ -1.81
TOPBP1-210ENST00000572787 NTF3P20783 257 aa3.74□□□□□ -1.81
TOPBP1-210ENST00000572787 CA7P43166 264 aa3.74□□□□□ -1.81
TOPBP1-210ENST00000572787 HOXC5Q00444 222 aa3.74□□□□□ -1.81
TOPBP1-210ENST00000572787 SLC38A11Q08AI6 406 aa3.74□□□□□ -1.81
TOPBP1-210ENST00000572787 EIF3IQ13347 325 aaKnown RBP3.74□□□□□ -1.81
TOPBP1-210ENST00000572787 ELOCQ15369 112 aa3.74□□□□□ -1.81
TOPBP1-210ENST00000572787 ADAMTSL4-AS1Q5T5F5 129 aa3.74□□□□□ -1.81
TOPBP1-210ENST00000572787 C19orf48Q6RUI8 117 aa3.74□□□□□ -1.81
TOPBP1-210ENST00000572787 PCSK4Q6UW60 755 aa3.74□□□□□ -1.81
TOPBP1-210ENST00000572787 C1orf174Q8IYL3 243 aa3.74□□□□□ -1.81
TOPBP1-210ENST00000572787 OR11G2Q8NGC1 345 aa3.74□□□□□ -1.81
TOPBP1-210ENST00000572787 OR5A2Q8NGI9 324 aa3.74□□□□□ -1.81
TOPBP1-210ENST00000572787 LMX1AQ8TE12 382 aa3.74□□□□□ -1.81
TOPBP1-210ENST00000572787 FAM104AQ969W3 186 aa3.74□□□□□ -1.81
TOPBP1-210ENST00000572787 C8orf49Q96NF6 230 aa3.74□□□□□ -1.81
TOPBP1-210ENST00000572787 AP1S3Q96PC3 154 aa3.74□□□□□ -1.81
TOPBP1-210ENST00000572787 TRIB3Q96RU7 358 aa3.74□□□□□ -1.81
TOPBP1-210ENST00000572787 SPIN2AQ99865 258 aa3.74□□□□□ -1.81
TOPBP1-210ENST00000572787 SPIN2BQ9BPZ2 258 aa3.74□□□□□ -1.81
TOPBP1-210ENST00000572787 SYT15Q9BQS2 421 aa3.74□□□□□ -1.81
TOPBP1-210ENST00000572787 SLC25A21Q9BQT8 299 aaPredicted RBP3.74□□□□□ -1.81
TOPBP1-210ENST00000572787 C1QTNF4Q9BXJ3 329 aa3.74□□□□□ -1.81
TOPBP1-210ENST00000572787 WDR61Q9GZS3 305 aaKnown RBP3.74□□□□□ -1.81
TOPBP1-210ENST00000572787 ZNF706Q9Y5V0 76 aaPredicted RBP3.74□□□□□ -1.81
TOPBP1-210ENST00000572787 REREQ9P2R6 1566 aa3.73□□□□□ -1.81
TOPBP1-210ENST00000572787 NAIPQ13075 1403 aa3.73□□□□□ -1.81
TOPBP1-210ENST00000572787 TRAV30A0A087WSZ9 112 aa3.73□□□□□ -1.81
TOPBP1-210ENST00000572787 IGHV3-74A0A0B4J1X5 117 aa3.73□□□□□ -1.81
TOPBP1-210ENST00000572787 TMEM72A0PK05 275 aa3.73□□□□□ -1.81
TOPBP1-210ENST00000572787 TMEM218A2RU14 115 aa3.73□□□□□ -1.81
TOPBP1-210ENST00000572787 MEIS3P1A6NDR6 274 aa3.73□□□□□ -1.81
TOPBP1-210ENST00000572787 DPRXA6NFQ7 191 aa3.73□□□□□ -1.81
TOPBP1-210ENST00000572787 NDUFC2-KCTD14E9PQ53 114 aa3.73□□□□□ -1.81
TOPBP1-210ENST00000572787 H7BYZ3 331 aa3.73□□□□□ -1.81
TOPBP1-210ENST00000572787 LST1O00453 97 aa3.73□□□□□ -1.81
TOPBP1-210ENST00000572787 TOMM40O96008 361 aa3.73□□□□□ -1.81
TOPBP1-210ENST00000572787 GPX1P07203 203 aa3.73□□□□□ -1.81
TOPBP1-210ENST00000572787 ZSCAN5DPP0CG00 497 aa3.73□□□□□ -1.81
TOPBP1-210ENST00000572787 CSRP1P21291 193 aaKnown RBP3.73□□□□□ -1.81
TOPBP1-210ENST00000572787 CDKN2AP42771 156 aaKnown RBP3.73□□□□□ -1.81
TOPBP1-210ENST00000572787 GNG4P50150 75 aa3.73□□□□□ -1.81
TOPBP1-210ENST00000572787 ZNF83P51522 516 aa3.73□□□□□ -1.81
TOPBP1-210ENST00000572787 DSCR9P59020 149 aa3.73□□□□□ -1.81
TOPBP1-210ENST00000572787 RTL8BQ17RB0 113 aa3.73□□□□□ -1.81
TOPBP1-210ENST00000572787 ZNF181Q2M3W8 571 aa3.73□□□□□ -1.81
TOPBP1-210ENST00000572787 MRPL2Q5T653 305 aaKnown RBP3.73□□□□□ -1.81
TOPBP1-210ENST00000572787 WDR59Q6PJI9 974 aa3.73□□□□□ -1.81
TOPBP1-210ENST00000572787 WDR86Q86TI4 376 aa3.73□□□□□ -1.81
TOPBP1-210ENST00000572787 ZNF429Q86V71 674 aa3.73□□□□□ -1.81
TOPBP1-210ENST00000572787 LHFPL1Q86WI0 220 aa3.73□□□□□ -1.81
TOPBP1-210ENST00000572787 PRR15Q8IV56 129 aa3.73□□□□□ -1.81
TOPBP1-210ENST00000572787 NRACQ8N912 160 aa3.73□□□□□ -1.81
TOPBP1-210ENST00000572787 ZNF555Q8NEP9 628 aa3.73□□□□□ -1.81
TOPBP1-210ENST00000572787 OR2M3Q8NG83 312 aa3.73□□□□□ -1.81
TOPBP1-210ENST00000572787 ZNF721Q8TF20 911 aa3.73□□□□□ -1.81
TOPBP1-210ENST00000572787 BORCS8Q96FH0 119 aa3.73□□□□□ -1.81
TOPBP1-210ENST00000572787 C18orf15Q96N68 181 aa3.73□□□□□ -1.81
TOPBP1-210ENST00000572787 ERMAPQ96PL5 475 aaPredicted RBP3.73□□□□□ -1.81
TOPBP1-210ENST00000572787 C11orf68Q9H3H3 251 aaKnown RBP3.73□□□□□ -1.81
TOPBP1-210ENST00000572787 DHRS4-AS1Q9P1J3 65 aa3.73□□□□□ -1.81
TOPBP1-210ENST00000572787 NAT8Q9UHE5 227 aa3.73□□□□□ -1.81
TOPBP1-210ENST00000572787 TAC3Q9UHF0 121 aa3.73□□□□□ -1.81
TOPBP1-210ENST00000572787 PCTPQ9UKL6 214 aa3.73□□□□□ -1.81
TOPBP1-210ENST00000572787 ADAMTS20P59510 1910 aa3.72□□□□□ -1.81
TOPBP1-210ENST00000572787 PRG4Q92954 1404 aaPredicted RBP3.72□□□□□ -1.81
TOPBP1-210ENST00000572787 ERICH3Q5RHP9 1530 aa3.72□□□□□ -1.81
TOPBP1-210ENST00000572787 TRBV20OR9-2A0A075B6H5 130 aa3.72□□□□□ -1.81
TOPBP1-210ENST00000572787 ARRDC5A6NEK1 342 aa3.72□□□□□ -1.81
TOPBP1-210ENST00000572787 IFITM5A6NNB3 132 aa3.72□□□□□ -1.81
TOPBP1-210ENST00000572787 A8MXK9 166 aa3.72□□□□□ -1.81
TOPBP1-210ENST00000572787 KRTAP4-16G5E9R7 235 aaPredicted RBP3.72□□□□□ -1.81
TOPBP1-210ENST00000572787 J3QQQ9 107 aa3.72□□□□□ -1.81
TOPBP1-210ENST00000572787 COX7A2LO14548 114 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms