RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 RBMX2Q9Y388 322 aaKnown RBP13.79□□□□□ -0.2
CHD3-214ENST00000572579 DMRT1Q9Y5R6 373 aa13.79□□□□□ -0.2
CHD3-214ENST00000572579 TRBV9A0A0B4J1U6 114 aa13.78□□□□□ -0.2
CHD3-214ENST00000572579 IZUMO1RA6ND01 250 aa13.78□□□□□ -0.2
CHD3-214ENST00000572579 ATP6V1G2O95670 118 aa13.78□□□□□ -0.2
CHD3-214ENST00000572579 PTHLHP12272 177 aa13.78□□□□□ -0.2
CHD3-214ENST00000572579 MECP2P51608 486 aaKnown RBP13.78□□□□□ -0.2
CHD3-214ENST00000572579 TNXAQ16473 311 aa13.78□□□□□ -0.2
CHD3-214ENST00000572579 C19orf35Q6ZS72 473 aa13.78□□□□□ -0.2
CHD3-214ENST00000572579 ZNF645Q8N7E2 425 aa13.78□□□□□ -0.2
CHD3-214ENST00000572579 LGALS14Q8TCE9 139 aa13.78□□□□□ -0.2
CHD3-214ENST00000572579 USMG5Q96IX5 58 aa13.78□□□□□ -0.2
CHD3-214ENST00000572579 ELOVL1Q9BW60 279 aa13.78□□□□□ -0.2
CHD3-214ENST00000572579 AKIP1Q9NQ31 210 aa13.78□□□□□ -0.2
CHD3-214ENST00000572579 COA4Q9NYJ1 87 aa13.78□□□□□ -0.2
CHD3-214ENST00000572579 OR2W1Q9Y3N9 320 aa13.78□□□□□ -0.2
CHD3-214ENST00000572579 C3orf84H3BNL1 204 aa13.77□□□□□ -0.21
CHD3-214ENST00000572579 FCGR3BO75015 233 aa13.77□□□□□ -0.21
CHD3-214ENST00000572579 TUSC2O75896 110 aa13.77□□□□□ -0.21
CHD3-214ENST00000572579 OR9G9P0C7N8 305 aa13.77□□□□□ -0.21
CHD3-214ENST00000572579 AADACP22760 399 aa13.77□□□□□ -0.21
CHD3-214ENST00000572579 SDC2P34741 201 aa13.77□□□□□ -0.21
CHD3-214ENST00000572579 VMA21Q3ZAQ7 101 aa13.77□□□□□ -0.21
CHD3-214ENST00000572579 OR2B11Q5JQS5 317 aa13.77□□□□□ -0.21
CHD3-214ENST00000572579 ANKRD13BQ86YJ7 626 aa13.77□□□□□ -0.21
CHD3-214ENST00000572579 OSR1Q8TAX0 266 aaPredicted RBP13.77□□□□□ -0.21
CHD3-214ENST00000572579 SLC25A38Q96DW6 304 aa13.77□□□□□ -0.21
CHD3-214ENST00000572579 TM2D3Q9BRN9 247 aa13.77□□□□□ -0.21
CHD3-214ENST00000572579 DCSTAMPQ9H295 470 aa13.77□□□□□ -0.21
CHD3-214ENST00000572579 DNAH1Q9P2D7 4330 aa13.77□□□□□ -0.21
CHD3-214ENST00000572579 LYSTQ99698 3801 aa13.77□□□□□ -0.21
CHD3-214ENST00000572579 A8MZ25 164 aa13.76□□□□□ -0.21
CHD3-214ENST00000572579 BMPR1BO00238 502 aa13.76□□□□□ -0.21
CHD3-214ENST00000572579 RHOGP84095 191 aa13.76□□□□□ -0.21
CHD3-214ENST00000572579 CASC10Q5T4H9 136 aa13.76□□□□□ -0.21
CHD3-214ENST00000572579 SFXN4Q6P4A7 337 aa13.76□□□□□ -0.21
CHD3-214ENST00000572579 CNIH2Q6PI25 160 aa13.76□□□□□ -0.21
CHD3-214ENST00000572579 TPRA1Q86W33 373 aa13.76□□□□□ -0.21
CHD3-214ENST00000572579 MUC7Q8TAX7 377 aa13.76□□□□□ -0.21
CHD3-214ENST00000572579 RRP15Q9Y3B9 282 aaKnown RBP13.76□□□□□ -0.21
CHD3-214ENST00000572579 HMX3A6NHT5 357 aa13.75□□□□□ -0.21
CHD3-214ENST00000572579 TEX22C9J3V5 150 aa13.75□□□□□ -0.21
CHD3-214ENST00000572579 IL6RP08887 468 aaPredicted RBP13.75□□□□□ -0.21
CHD3-214ENST00000572579 CBX3Q13185 183 aa13.75□□□□□ -0.21
CHD3-214ENST00000572579 CDK10Q15131 360 aa13.75□□□□□ -0.21
CHD3-214ENST00000572579 ZNF773Q6PK81 442 aa13.75□□□□□ -0.21
CHD3-214ENST00000572579 TTC9CQ8N5M4 171 aa13.75□□□□□ -0.21
CHD3-214ENST00000572579 GVQW1Q8N7I0 195 aa13.75□□□□□ -0.21
CHD3-214ENST00000572579 ACOT12Q8WYK0 555 aa13.75□□□□□ -0.21
CHD3-214ENST00000572579 PHB2Q99623 299 aa13.75□□□□□ -0.21
CHD3-214ENST00000572579 ANXA10Q9UJ72 324 aa13.75□□□□□ -0.21
CHD3-214ENST00000572579 CTXN2P0C2S0 81 aa13.74□□□□□ -0.21
CHD3-214ENST00000572579 MYOD1P15172 320 aa13.74□□□□□ -0.21
CHD3-214ENST00000572579 EDN2P20800 178 aa13.74□□□□□ -0.21
CHD3-214ENST00000572579 ARL6IP1Q15041 203 aa13.74□□□□□ -0.21
CHD3-214ENST00000572579 CENPOQ9BU64 300 aa13.74□□□□□ -0.21
CHD3-214ENST00000572579 RHBDL2Q9NX52 303 aa13.74□□□□□ -0.21
CHD3-214ENST00000572579 GAR1Q9NY12 217 aaKnown RBP13.74□□□□□ -0.21
CHD3-214ENST00000572579 SIGLEC8Q9NYZ4 499 aa13.74□□□□□ -0.21
CHD3-214ENST00000572579 SSR3Q9UNL2 185 aa13.74□□□□□ -0.21
CHD3-214ENST00000572579 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.73□□□□□ -0.21
CHD3-214ENST00000572579 MXD1Q05195 221 aa13.73□□□□□ -0.21
CHD3-214ENST00000572579 KCTD9Q7L273 389 aa13.73□□□□□ -0.21
CHD3-214ENST00000572579 PUSL1Q8N0Z8 303 aaKnown RBP13.73□□□□□ -0.21
CHD3-214ENST00000572579 MFSD4AQ8N468 514 aa13.73□□□□□ -0.21
CHD3-214ENST00000572579 FCGR1BQ92637 280 aa13.73□□□□□ -0.21
CHD3-214ENST00000572579 DCUN1D5Q9BTE7 237 aa13.73□□□□□ -0.21
CHD3-214ENST00000572579 YTHDF1Q9BYJ9 559 aaKnown RBP13.73□□□□□ -0.21
CHD3-214ENST00000572579 SPATA2Q9UM82 520 aa13.73□□□□□ -0.21
CHD3-214ENST00000572579 CGB1A6NKQ9 187 aa13.72□□□□□ -0.21
CHD3-214ENST00000572579 GNG2P59768 71 aa13.72□□□□□ -0.21
CHD3-214ENST00000572579 ATP5G2Q06055 141 aa13.72□□□□□ -0.21
CHD3-214ENST00000572579 SNAPC3Q92966 411 aa13.72□□□□□ -0.21
CHD3-214ENST00000572579 FANCD2OSQ96PS1 177 aa13.72□□□□□ -0.21
CHD3-214ENST00000572579 EDA2RQ9HAV5 297 aa13.72□□□□□ -0.21
CHD3-214ENST00000572579 CCL28Q9NRJ3 127 aa13.72□□□□□ -0.21
CHD3-214ENST00000572579 TAS2R8Q9NYW2 309 aa13.72□□□□□ -0.21
CHD3-214ENST00000572579 TRAV18A0A075B6X5 111 aa13.71□□□□□ -0.21
CHD3-214ENST00000572579 FAM223BA6NKX1 122 aa13.71□□□□□ -0.21
CHD3-214ENST00000572579 OR2J3O76001 311 aa13.71□□□□□ -0.21
CHD3-214ENST00000572579 OR2A4O95047 310 aa13.71□□□□□ -0.21
CHD3-214ENST00000572579 HLA-AP01891 365 aaKnown RBP13.71□□□□□ -0.21
CHD3-214ENST00000572579 FCER2P06734 321 aa13.71□□□□□ -0.21
CHD3-214ENST00000572579 TGFBR1P36897 503 aa13.71□□□□□ -0.21
CHD3-214ENST00000572579 EXOSC2Q13868 293 aaKnown RBP13.71□□□□□ -0.21
CHD3-214ENST00000572579 HAGHQ16775 308 aa13.71□□□□□ -0.21
CHD3-214ENST00000572579 RPEL1Q2QD12 228 aa13.71□□□□□ -0.21
CHD3-214ENST00000572579 FAM223AQ8IWN6 122 aa13.71□□□□□ -0.21
CHD3-214ENST00000572579 MMD2Q8IY49 270 aa13.71□□□□□ -0.21
CHD3-214ENST00000572579 TMEM167AQ8TBQ9 72 aa13.71□□□□□ -0.21
CHD3-214ENST00000572579 OR2A7Q96R45 310 aa13.71□□□□□ -0.21
CHD3-214ENST00000572579 CITED4Q96RK1 184 aa13.71□□□□□ -0.21
CHD3-214ENST00000572579 SPIN2AQ99865 258 aa13.71□□□□□ -0.21
CHD3-214ENST00000572579 SPIN2BQ9BPZ2 258 aa13.71□□□□□ -0.21
CHD3-214ENST00000572579 PRELID3BQ9Y3B1 194 aa13.71□□□□□ -0.21
CHD3-214ENST00000572579 HYDINQ4G0P3 5121 aa13.71□□□□□ -0.22
CHD3-214ENST00000572579 ZNF785A8K8V0 405 aa13.7□□□□□ -0.22
CHD3-214ENST00000572579 PPP5D1E7EU14 171 aa13.7□□□□□ -0.22
CHD3-214ENST00000572579 H0Y980 276 aa13.7□□□□□ -0.22
CHD3-214ENST00000572579 MPPED1O15442 326 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms