RNA–Protein interactions for RNA: ENST00000571558.5

RPAIN-209, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,423 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-209ENST00000571558 LIN7CQ9NUP9 197 aaKnown RBP10.99□□□□□ -0.65
RPAIN-209ENST00000571558 HILPDAQ9Y5L2 63 aa10.99□□□□□ -0.65
RPAIN-209ENST00000571558 ALG5Q9Y673 324 aa10.99□□□□□ -0.65
RPAIN-209ENST00000571558 A0A0U1RQK1 487 aa10.98□□□□□ -0.65
RPAIN-209ENST00000571558 SNRPGP15A8MWD9 76 aa10.98□□□□□ -0.65
RPAIN-209ENST00000571558 H0YJW9 148 aa10.98□□□□□ -0.65
RPAIN-209ENST00000571558 B3GALNT1O75752 331 aa10.98□□□□□ -0.65
RPAIN-209ENST00000571558 DUS4LO95620 317 aaKnown RBP10.98□□□□□ -0.65
RPAIN-209ENST00000571558 HLA-AP01891 365 aaKnown RBP10.98□□□□□ -0.65
RPAIN-209ENST00000571558 OR5AC1P0C628 307 aa10.98□□□□□ -0.65
RPAIN-209ENST00000571558 VAMP1P23763 118 aa10.98□□□□□ -0.65
RPAIN-209ENST00000571558 UCP1P25874 307 aa10.98□□□□□ -0.65
RPAIN-209ENST00000571558 PAX6P26367 422 aa10.98□□□□□ -0.65
RPAIN-209ENST00000571558 CATR1Q13166 79 aa10.98□□□□□ -0.65
RPAIN-209ENST00000571558 SSX2Q16385 188 aa10.98□□□□□ -0.65
RPAIN-209ENST00000571558 ANKRD55Q3KP44 614 aa10.98□□□□□ -0.65
RPAIN-209ENST00000571558 SP6Q3SY56 376 aa10.98□□□□□ -0.65
RPAIN-209ENST00000571558 Q6ZSV7 163 aa10.98□□□□□ -0.65
RPAIN-209ENST00000571558 OR8H3Q8N146 312 aa10.98□□□□□ -0.65
RPAIN-209ENST00000571558 TCTEX1D1Q8N7M0 179 aa10.98□□□□□ -0.65
RPAIN-209ENST00000571558 ZNF431Q8TF32 576 aaPredicted RBP10.98□□□□□ -0.65
RPAIN-209ENST00000571558 RYR3Q15413 4870 aa10.98□□□□□ -0.65
RPAIN-209ENST00000571558 A0A1B0GVG6 124 aa10.97□□□□□ -0.65
RPAIN-209ENST00000571558 RBFOX2O43251 390 aaKnown RBP eCLIP10.97□□□□□ -0.65
RPAIN-209ENST00000571558 RAMP3O60896 148 aa10.97□□□□□ -0.65
RPAIN-209ENST00000571558 IGHV4-59P01825 116 aa10.97□□□□□ -0.65
RPAIN-209ENST00000571558 C11orf88Q6PI97 169 aa10.97□□□□□ -0.65
RPAIN-209ENST00000571558 LHFPL5Q8TAF8 219 aa10.97□□□□□ -0.65
RPAIN-209ENST00000571558 MRAPQ8TCY5 172 aa10.97□□□□□ -0.65
RPAIN-209ENST00000571558 MITD1Q8WV92 249 aa10.97□□□□□ -0.65
RPAIN-209ENST00000571558 RBMXL1Q96E39 390 aaKnown RBP10.97□□□□□ -0.65
RPAIN-209ENST00000571558 TMEM56Q96MV1 263 aa10.97□□□□□ -0.65
RPAIN-209ENST00000571558 PRR13Q9NZ81 148 aa10.97□□□□□ -0.65
RPAIN-209ENST00000571558 KCNIP3Q9Y2W7 256 aa10.97□□□□□ -0.65
RPAIN-209ENST00000571558 PRELID3BQ9Y3B1 194 aa10.97□□□□□ -0.65
RPAIN-209ENST00000571558 TMEM56-RWDD3S4R434 201 aa10.97□□□□□ -0.65
RPAIN-209ENST00000571558 CDS2O95674 445 aa10.96□□□□□ -0.65
RPAIN-209ENST00000571558 IGKV1-39P01597 117 aa10.96□□□□□ -0.65
RPAIN-209ENST00000571558 IGKV1-16P04430 117 aa10.96□□□□□ -0.65
RPAIN-209ENST00000571558 IGKV1D-39P04432 117 aa10.96□□□□□ -0.65
RPAIN-209ENST00000571558 KIR2DS2P43631 304 aa10.96□□□□□ -0.65
RPAIN-209ENST00000571558 TAGLNQ01995 201 aaKnown RBP10.96□□□□□ -0.65
RPAIN-209ENST00000571558 OR2B11Q5JQS5 317 aa10.96□□□□□ -0.65
RPAIN-209ENST00000571558 DHRS7BQ6IAN0 325 aaPredicted RBP10.96□□□□□ -0.65
RPAIN-209ENST00000571558 CCDC144NLQ6NUI1 221 aa10.96□□□□□ -0.65
RPAIN-209ENST00000571558 LIAT1Q6ZQX7 453 aa10.96□□□□□ -0.65
RPAIN-209ENST00000571558 SPAG16Q8N0X2 631 aa10.96□□□□□ -0.65
RPAIN-209ENST00000571558 LRTM2Q8N967 370 aa10.96□□□□□ -0.65
RPAIN-209ENST00000571558 MEGF9Q9H1U4 602 aa10.96□□□□□ -0.65
RPAIN-209ENST00000571558 A0A0B4J2A0 478 aa10.95□□□□□ -0.66
RPAIN-209ENST00000571558 BTBD17A6NE02 478 aa10.95□□□□□ -0.66
RPAIN-209ENST00000571558 DBX1A6NMT0 343 aa10.95□□□□□ -0.66
RPAIN-209ENST00000571558 FAM90A9PA6NNJ1 464 aa10.95□□□□□ -0.66
RPAIN-209ENST00000571558 CREBL2O60519 120 aaPredicted RBP10.95□□□□□ -0.66
RPAIN-209ENST00000571558 FCGR3BO75015 233 aa10.95□□□□□ -0.66
RPAIN-209ENST00000571558 ANXA3P12429 323 aa10.95□□□□□ -0.66
RPAIN-209ENST00000571558 MC5RP33032 325 aa10.95□□□□□ -0.66
RPAIN-209ENST00000571558 MOB3BQ86TA1 216 aa10.95□□□□□ -0.66
RPAIN-209ENST00000571558 CD300LFQ8TDQ1 290 aa10.95□□□□□ -0.66
RPAIN-209ENST00000571558 CASTOR1Q8WTX7 329 aa10.95□□□□□ -0.66
RPAIN-209ENST00000571558 OR51J1Q9H342 316 aa10.95□□□□□ -0.66
RPAIN-209ENST00000571558 GPN1Q9HCN4 374 aaPredicted RBP10.95□□□□□ -0.66
RPAIN-209ENST00000571558 SLC35D1Q9NTN3 355 aa10.95□□□□□ -0.66
RPAIN-209ENST00000571558 SHPKQ9UHJ6 478 aa10.95□□□□□ -0.66
RPAIN-209ENST00000571558 FAM96BQ9Y3D0 163 aa10.95□□□□□ -0.66
RPAIN-209ENST00000571558 IGHV3-72A0A0B4J1Y9 119 aa10.94□□□□□ -0.66
RPAIN-209ENST00000571558 APOA2P02652 100 aa10.94□□□□□ -0.66
RPAIN-209ENST00000571558 SERPINE2P07093 398 aa10.94□□□□□ -0.66
RPAIN-209ENST00000571558 CD1BP29016 333 aa10.94□□□□□ -0.66
RPAIN-209ENST00000571558 LPAR6P43657 344 aa10.94□□□□□ -0.66
RPAIN-209ENST00000571558 DYNLT3P51808 116 aa10.94□□□□□ -0.66
RPAIN-209ENST00000571558 CBX3Q13185 183 aa10.94□□□□□ -0.66
RPAIN-209ENST00000571558 PDPNQ86YL7 162 aa10.94□□□□□ -0.66
RPAIN-209ENST00000571558 SELENOHQ8IZQ5 122 aaKnown RBP10.94□□□□□ -0.66
RPAIN-209ENST00000571558 OR4S2Q8NH73 311 aa10.94□□□□□ -0.66
RPAIN-209ENST00000571558 IL22RA2Q969J5 263 aa10.94□□□□□ -0.66
RPAIN-209ENST00000571558 PLEKHA2Q9HB19 425 aa10.94□□□□□ -0.66
RPAIN-209ENST00000571558 VPREB3Q9UKI3 123 aa10.94□□□□□ -0.66
RPAIN-209ENST00000571558 WASHC3Q9Y3C0 194 aa10.94□□□□□ -0.66
RPAIN-209ENST00000571558 S1PR2O95136 353 aa10.93□□□□□ -0.66
RPAIN-209ENST00000571558 FBP1P09467 338 aa10.93□□□□□ -0.66
RPAIN-209ENST00000571558 RRASP10301 218 aa10.93□□□□□ -0.66
RPAIN-209ENST00000571558 RPA2P15927 270 aa10.93□□□□□ -0.66
RPAIN-209ENST00000571558 RAB13P51153 203 aa10.93□□□□□ -0.66
RPAIN-209ENST00000571558 SRPXP78539 464 aa10.93□□□□□ -0.66
RPAIN-209ENST00000571558 EBI3Q14213 229 aa10.93□□□□□ -0.66
RPAIN-209ENST00000571558 RTL8BQ17RB0 113 aa10.93□□□□□ -0.66
RPAIN-209ENST00000571558 TMEM177Q53S58 311 aa10.93□□□□□ -0.66
RPAIN-209ENST00000571558 LIN54Q6MZP7 749 aa10.93□□□□□ -0.66
RPAIN-209ENST00000571558 C12orf45Q8N5I9 185 aaPredicted RBP10.93□□□□□ -0.66
RPAIN-209ENST00000571558 PIFOQ8TCI5 191 aa10.93□□□□□ -0.66
RPAIN-209ENST00000571558 RITA1Q96K30 269 aa10.93□□□□□ -0.66
RPAIN-209ENST00000571558 PHB2Q99623 299 aa10.93□□□□□ -0.66
RPAIN-209ENST00000571558 COMMD9Q9P000 198 aa10.93□□□□□ -0.66
RPAIN-209ENST00000571558 TET2Q6N021 2002 aaPredicted RBP10.93□□□□□ -0.66
RPAIN-209ENST00000571558 CRYZL1O95825 349 aa10.92□□□□□ -0.66
RPAIN-209ENST00000571558 HPRT1P00492 218 aa10.92□□□□□ -0.66
RPAIN-209ENST00000571558 IGKV1-5P01602 117 aa10.92□□□□□ -0.66
RPAIN-209ENST00000571558 PRB2P02812 416 aaPredicted RBP10.92□□□□□ -0.66
RPAIN-209ENST00000571558 AANATQ16613 207 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms