RNA–Protein interactions for RNA: ENST00000571263.2

CDRT1-206, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best)

Gene CDRT1, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-206ENST00000571263 CD99P14209 185 aa9.6□□□□□ -0.87
CDRT1-206ENST00000571263 CXCL3P19876 107 aa9.6□□□□□ -0.87
CDRT1-206ENST00000571263 G6PCP35575 357 aa9.6□□□□□ -0.87
CDRT1-206ENST00000571263 LINC00205P59089 165 aa9.6□□□□□ -0.87
CDRT1-206ENST00000571263 TCTE3Q8IZS6 198 aa9.6□□□□□ -0.87
CDRT1-206ENST00000571263 GPR146Q96CH1 333 aa9.6□□□□□ -0.87
CDRT1-206ENST00000571263 AJUBAQ96IF1 538 aa9.6□□□□□ -0.87
CDRT1-206ENST00000571263 PRR13Q9NZ81 148 aa9.6□□□□□ -0.87
CDRT1-206ENST00000571263 KIAA1456Q9P272 454 aa9.6□□□□□ -0.87
CDRT1-206ENST00000571263 PITPNC1Q9UKF7 332 aa9.6□□□□□ -0.87
CDRT1-206ENST00000571263 APCP25054 2843 aa9.6□□□□□ -0.87
CDRT1-206ENST00000571263 CELSR2Q9HCU4 2923 aa9.6□□□□□ -0.87
CDRT1-206ENST00000571263 ARHGAP32A7KAX9 2087 aa9.59□□□□□ -0.87
CDRT1-206ENST00000571263 MED6O75586 246 aa9.59□□□□□ -0.87
CDRT1-206ENST00000571263 IGKV1D-33P01593 117 aa9.59□□□□□ -0.87
CDRT1-206ENST00000571263 IGKV1-33P01594 117 aa9.59□□□□□ -0.87
CDRT1-206ENST00000571263 IGKV1-5P01602 117 aa9.59□□□□□ -0.87
CDRT1-206ENST00000571263 IGKV1-16P04430 117 aa9.59□□□□□ -0.87
CDRT1-206ENST00000571263 IL6RP08887 468 aaPredicted RBP9.59□□□□□ -0.87
CDRT1-206ENST00000571263 P0C879 139 aa9.59□□□□□ -0.87
CDRT1-206ENST00000571263 MAS1LP35410 378 aa9.59□□□□□ -0.87
CDRT1-206ENST00000571263 H2BFSP57053 126 aa9.59□□□□□ -0.87
CDRT1-206ENST00000571263 LRRC75BQ2VPJ9 315 aa9.59□□□□□ -0.87
CDRT1-206ENST00000571263 RUSC1-AS1Q66K80 236 aa9.59□□□□□ -0.87
CDRT1-206ENST00000571263 BRD3OSQ6XYD6 125 aa9.59□□□□□ -0.87
CDRT1-206ENST00000571263 ZNF429Q86V71 674 aa9.59□□□□□ -0.87
CDRT1-206ENST00000571263 PUSL1Q8N0Z8 303 aaKnown RBP9.59□□□□□ -0.87
CDRT1-206ENST00000571263 ZBTB8BQ8NAP8 495 aaPredicted RBP9.59□□□□□ -0.87
CDRT1-206ENST00000571263 OR52E5Q8NH55 327 aa9.59□□□□□ -0.87
CDRT1-206ENST00000571263 OR4A16Q8NH70 328 aa9.59□□□□□ -0.87
CDRT1-206ENST00000571263 OR1S1Q8NH92 325 aa9.59□□□□□ -0.87
CDRT1-206ENST00000571263 EAF1Q96JC9 268 aaPredicted RBP9.59□□□□□ -0.87
CDRT1-206ENST00000571263 OR10C1Q96KK4 312 aa9.59□□□□□ -0.87
CDRT1-206ENST00000571263 TMUB1Q9BVT8 246 aa9.59□□□□□ -0.87
CDRT1-206ENST00000571263 YAE1D1Q9NRH1 226 aa9.59□□□□□ -0.87
CDRT1-206ENST00000571263 TMEM140Q9NV12 185 aa9.59□□□□□ -0.87
CDRT1-206ENST00000571263 PRNDQ9UKY0 176 aa9.59□□□□□ -0.87
CDRT1-206ENST00000571263 CRYBG3Q68DQ2 2970 aa9.59□□□□□ -0.87
CDRT1-206ENST00000571263 A0A0U1RQK1 487 aa9.58□□□□□ -0.88
CDRT1-206ENST00000571263 UPK2O00526 184 aa9.58□□□□□ -0.88
CDRT1-206ENST00000571263 CCSO14618 274 aa9.58□□□□□ -0.88
CDRT1-206ENST00000571263 ST8SIA3O43173 380 aa9.58□□□□□ -0.88
CDRT1-206ENST00000571263 RBMXL2O75526 392 aaKnown RBP9.58□□□□□ -0.88
CDRT1-206ENST00000571263 SNRNP70P08621 437 aaKnown RBP9.58□□□□□ -0.88
CDRT1-206ENST00000571263 TMEM11P17152 192 aa9.58□□□□□ -0.88
CDRT1-206ENST00000571263 SRP14P37108 136 aaKnown RBP9.58□□□□□ -0.88
CDRT1-206ENST00000571263 CD83Q01151 205 aa9.58□□□□□ -0.88
CDRT1-206ENST00000571263 HES1Q14469 280 aa9.58□□□□□ -0.88
CDRT1-206ENST00000571263 C2orf68Q2NKX9 166 aa9.58□□□□□ -0.88
CDRT1-206ENST00000571263 AARDQ4LEZ3 155 aa9.58□□□□□ -0.88
CDRT1-206ENST00000571263 FAM120AOSQ5T036 256 aa9.58□□□□□ -0.88
CDRT1-206ENST00000571263 OR4A47Q6IF82 309 aa9.58□□□□□ -0.88
CDRT1-206ENST00000571263 C16orf82Q7Z2V1 217 aa9.58□□□□□ -0.88
CDRT1-206ENST00000571263 FOXRED2Q8IWF2 684 aa9.58□□□□□ -0.88
CDRT1-206ENST00000571263 MMD2Q8IY49 270 aa9.58□□□□□ -0.88
CDRT1-206ENST00000571263 DYNAPQ8N1N2 210 aa9.58□□□□□ -0.88
CDRT1-206ENST00000571263 NPBQ8NG41 125 aa9.58□□□□□ -0.88
CDRT1-206ENST00000571263 OR5R1Q8NH85 324 aa9.58□□□□□ -0.88
CDRT1-206ENST00000571263 TMEM167AQ8TBQ9 72 aa9.58□□□□□ -0.88
CDRT1-206ENST00000571263 FYTTD1Q96QD9 318 aaKnown RBP9.58□□□□□ -0.88
CDRT1-206ENST00000571263 NEURL2Q9BR09 285 aa9.58□□□□□ -0.88
CDRT1-206ENST00000571263 PRDM13Q9H4Q3 707 aa9.58□□□□□ -0.88
CDRT1-206ENST00000571263 GSKIPQ9P0R6 139 aa9.58□□□□□ -0.88
CDRT1-206ENST00000571263 IGHV3OR16-10A0A075B7F0 116 aa9.57□□□□□ -0.88
CDRT1-206ENST00000571263 IGHV3-72A0A0B4J1Y9 119 aa9.57□□□□□ -0.88
CDRT1-206ENST00000571263 BTBD17A6NE02 478 aa9.57□□□□□ -0.88
CDRT1-206ENST00000571263 M0QZK8 103 aa9.57□□□□□ -0.88
CDRT1-206ENST00000571263 NBR2O15453 112 aa9.57□□□□□ -0.88
CDRT1-206ENST00000571263 PITX3O75364 302 aa9.57□□□□□ -0.88
CDRT1-206ENST00000571263 KBTBD11O94819 623 aa9.57□□□□□ -0.88
CDRT1-206ENST00000571263 SIX6O95475 246 aa9.57□□□□□ -0.88
CDRT1-206ENST00000571263 PVALBP20472 110 aaPredicted RBP9.57□□□□□ -0.88
CDRT1-206ENST00000571263 PSMB6P28072 239 aa9.57□□□□□ -0.88
CDRT1-206ENST00000571263 NKX2-1P43699 371 aaPredicted RBP9.57□□□□□ -0.88
CDRT1-206ENST00000571263 ID3Q02535 119 aa9.57□□□□□ -0.88
CDRT1-206ENST00000571263 KRTAP1-1Q07627 177 aa9.57□□□□□ -0.88
CDRT1-206ENST00000571263 IL15RAQ13261 267 aa9.57□□□□□ -0.88
CDRT1-206ENST00000571263 PSG5Q15238 335 aa9.57□□□□□ -0.88
CDRT1-206ENST00000571263 OR4D5Q8NGN0 318 aa9.57□□□□□ -0.88
CDRT1-206ENST00000571263 OR2T35Q8NGX2 323 aa9.57□□□□□ -0.88
CDRT1-206ENST00000571263 THAP6Q8TBB0 222 aa9.57□□□□□ -0.88
CDRT1-206ENST00000571263 ST6GAL2Q96JF0 529 aa9.57□□□□□ -0.88
CDRT1-206ENST00000571263 SSX3Q99909 188 aa9.57□□□□□ -0.88
CDRT1-206ENST00000571263 CHIAQ9BZP6 476 aa9.57□□□□□ -0.88
CDRT1-206ENST00000571263 RANGRFQ9HD47 186 aaPredicted RBP9.57□□□□□ -0.88
CDRT1-206ENST00000571263 CACNG5Q9UF02 275 aa9.57□□□□□ -0.88
CDRT1-206ENST00000571263 ZNF257Q9Y2Q1 563 aa9.57□□□□□ -0.88
CDRT1-206ENST00000571263 UNC79Q9P2D8 2635 aa9.57□□□□□ -0.88
CDRT1-206ENST00000571263 SRRM4A7MD48 611 aaKnown RBP9.56□□□□□ -0.88
CDRT1-206ENST00000571263 WRBO00258 174 aa9.56□□□□□ -0.88
CDRT1-206ENST00000571263 RRHO14718 337 aa9.56□□□□□ -0.88
CDRT1-206ENST00000571263 ACTL6BO94805 426 aa9.56□□□□□ -0.88
CDRT1-206ENST00000571263 NDUFA3O95167 84 aa9.56□□□□□ -0.88
CDRT1-206ENST00000571263 IGLV2-23P01705 113 aa9.56□□□□□ -0.88
CDRT1-206ENST00000571263 SAA1P0DJI8 122 aaPredicted RBP9.56□□□□□ -0.88
CDRT1-206ENST00000571263 SPCS3P61009 180 aa9.56□□□□□ -0.88
CDRT1-206ENST00000571263 RPL8P62917 257 aaKnown RBP9.56□□□□□ -0.88
CDRT1-206ENST00000571263 RELBQ01201 579 aa9.56□□□□□ -0.88
CDRT1-206ENST00000571263 MMDQ15546 238 aa9.56□□□□□ -0.88
CDRT1-206ENST00000571263 SSX9Q7RTT3 188 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms