RNA–Protein interactions for RNA: ENST00000570324.1

NPLOC4-204, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 414 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-204ENST00000570324 TRAPPC2P0DI81 140 aa6.89□□□□□ -1.31
NPLOC4-204ENST00000570324 TRAPPC2BP0DI82 140 aa6.89□□□□□ -1.31
NPLOC4-204ENST00000570324 APELAP0DMC3 54 aa6.89□□□□□ -1.31
NPLOC4-204ENST00000570324 GP9P14770 177 aa6.89□□□□□ -1.31
NPLOC4-204ENST00000570324 SPNP16150 400 aa6.89□□□□□ -1.31
NPLOC4-204ENST00000570324 AADACP22760 399 aa6.89□□□□□ -1.31
NPLOC4-204ENST00000570324 DTYMKP23919 212 aa6.89□□□□□ -1.31
NPLOC4-204ENST00000570324 DEFA1P59665 94 aa6.89□□□□□ -1.31
NPLOC4-204ENST00000570324 DEFA3P59666 94 aa6.89□□□□□ -1.31
NPLOC4-204ENST00000570324 GNG2P59768 71 aa6.89□□□□□ -1.31
NPLOC4-204ENST00000570324 PJVKQ0ZLH3 352 aa6.89□□□□□ -1.31
NPLOC4-204ENST00000570324 SPCS2Q15005 226 aa6.89□□□□□ -1.31
NPLOC4-204ENST00000570324 SRSF7Q16629 238 aaKnown RBP eCLIP6.89□□□□□ -1.31
NPLOC4-204ENST00000570324 TMEM177Q53S58 311 aa6.89□□□□□ -1.31
NPLOC4-204ENST00000570324 TPRA1Q86W33 373 aa6.89□□□□□ -1.31
NPLOC4-204ENST00000570324 H1FOOQ8IZA3 346 aaPredicted RBP6.89□□□□□ -1.31
NPLOC4-204ENST00000570324 CCDC32Q9BV29 185 aa6.89□□□□□ -1.31
NPLOC4-204ENST00000570324 SLIRPQ9GZT3 109 aaKnown RBP6.89□□□□□ -1.31
NPLOC4-204ENST00000570324 NAA50Q9GZZ1 169 aaKnown RBP6.89□□□□□ -1.31
NPLOC4-204ENST00000570324 STUB1Q9UNE7 303 aa6.89□□□□□ -1.31
NPLOC4-204ENST00000570324 MRPS7Q9Y2R9 242 aaKnown RBP6.89□□□□□ -1.31
NPLOC4-204ENST00000570324 PRELID3BQ9Y3B1 194 aa6.89□□□□□ -1.31
NPLOC4-204ENST00000570324 MSGN1A6NI15 193 aa6.88□□□□□ -1.31
NPLOC4-204ENST00000570324 UPK1BO75841 260 aa6.88□□□□□ -1.31
NPLOC4-204ENST00000570324 TUSC2O75896 110 aa6.88□□□□□ -1.31
NPLOC4-204ENST00000570324 SLC22A5O76082 557 aa6.88□□□□□ -1.31
NPLOC4-204ENST00000570324 IGLV2-23P01705 113 aa6.88□□□□□ -1.31
NPLOC4-204ENST00000570324 SNRPBP14678 240 aaKnown RBP6.88□□□□□ -1.31
NPLOC4-204ENST00000570324 CD36P16671 472 aa6.88□□□□□ -1.31
NPLOC4-204ENST00000570324 FGF9P31371 208 aaPredicted RBP6.88□□□□□ -1.31
NPLOC4-204ENST00000570324 DUTP33316 252 aaKnown RBP6.88□□□□□ -1.31
NPLOC4-204ENST00000570324 S100A5P33763 92 aa6.88□□□□□ -1.31
NPLOC4-204ENST00000570324 UBE2KP61086 200 aa6.88□□□□□ -1.31
NPLOC4-204ENST00000570324 Q6ZS49 121 aa6.88□□□□□ -1.31
NPLOC4-204ENST00000570324 KCTD9Q7L273 389 aa6.88□□□□□ -1.31
NPLOC4-204ENST00000570324 OVCH2Q7RTZ1 564 aa6.88□□□□□ -1.31
NPLOC4-204ENST00000570324 TEX45Q8NA69 505 aa6.88□□□□□ -1.31
NPLOC4-204ENST00000570324 OSR1Q8TAX0 266 aaPredicted RBP6.88□□□□□ -1.31
NPLOC4-204ENST00000570324 TINAGL1Q9GZM7 467 aaPredicted RBP6.88□□□□□ -1.31
NPLOC4-204ENST00000570324 DCSTAMPQ9H295 470 aa6.88□□□□□ -1.31
NPLOC4-204ENST00000570324 ZMAT4Q9H898 229 aa6.88□□□□□ -1.31
NPLOC4-204ENST00000570324 TXNL4BQ9NX01 149 aaKnown RBP6.88□□□□□ -1.31
NPLOC4-204ENST00000570324 OR2W1Q9Y3N9 320 aa6.88□□□□□ -1.31
NPLOC4-204ENST00000570324 RGS13O14921 159 aa6.87□□□□□ -1.31
NPLOC4-204ENST00000570324 FCGR3BO75015 233 aa6.87□□□□□ -1.31
NPLOC4-204ENST00000570324 APOA1P02647 267 aa6.87□□□□□ -1.31
NPLOC4-204ENST00000570324 CRYGBP07316 175 aa6.87□□□□□ -1.31
NPLOC4-204ENST00000570324 NFYAP23511 347 aaPredicted RBP6.87□□□□□ -1.31
NPLOC4-204ENST00000570324 ARPC4P59998 168 aa6.87□□□□□ -1.31
NPLOC4-204ENST00000570324 MXD1Q05195 221 aa6.87□□□□□ -1.31
NPLOC4-204ENST00000570324 RPEL1Q2QD12 228 aa6.87□□□□□ -1.31
NPLOC4-204ENST00000570324 HACD4Q5VWC8 232 aa6.87□□□□□ -1.31
NPLOC4-204ENST00000570324 CNIH2Q6PI25 160 aa6.87□□□□□ -1.31
NPLOC4-204ENST00000570324 IDO2Q6ZQW0 420 aa6.87□□□□□ -1.31
NPLOC4-204ENST00000570324 SGPP2Q8IWX5 399 aa6.87□□□□□ -1.31
NPLOC4-204ENST00000570324 MMD2Q8IY49 270 aa6.87□□□□□ -1.31
NPLOC4-204ENST00000570324 ZNF645Q8N7E2 425 aa6.87□□□□□ -1.31
NPLOC4-204ENST00000570324 MCFD2Q8NI22 146 aa6.87□□□□□ -1.31
NPLOC4-204ENST00000570324 SRSF12Q8WXF0 261 aaKnown RBP6.87□□□□□ -1.31
NPLOC4-204ENST00000570324 USMG5Q96IX5 58 aa6.87□□□□□ -1.31
NPLOC4-204ENST00000570324 SPIN2AQ99865 258 aa6.87□□□□□ -1.31
NPLOC4-204ENST00000570324 SPIN2BQ9BPZ2 258 aa6.87□□□□□ -1.31
NPLOC4-204ENST00000570324 PEF1Q9UBV8 284 aaKnown RBP6.87□□□□□ -1.31
NPLOC4-204ENST00000570324 ELF5Q9UKW6 265 aaPredicted RBP6.87□□□□□ -1.31
NPLOC4-204ENST00000570324 IGKV1D-8A0A087WSZ0 117 aa6.86□□□□□ -1.31
NPLOC4-204ENST00000570324 LOC100506127A0A0U1RQW1 187 aa6.86□□□□□ -1.31
NPLOC4-204ENST00000570324 TMEM235A6NFC5 223 aa6.86□□□□□ -1.31
NPLOC4-204ENST00000570324 SRRM4A7MD48 611 aaKnown RBP6.86□□□□□ -1.31
NPLOC4-204ENST00000570324 LINC00473A8K010 186 aa6.86□□□□□ -1.31
NPLOC4-204ENST00000570324 H0Y980 276 aa6.86□□□□□ -1.31
NPLOC4-204ENST00000570324 HLA-DQB1P01920 261 aa6.86□□□□□ -1.31
NPLOC4-204ENST00000570324 OR9G9P0C7N8 305 aa6.86□□□□□ -1.31
NPLOC4-204ENST00000570324 FRMD6-AS1P0C7T7 363 aa6.86□□□□□ -1.31
NPLOC4-204ENST00000570324 EIF2B2P49770 351 aaKnown RBP6.86□□□□□ -1.31
NPLOC4-204ENST00000570324 SYNJ2BPP57105 145 aa6.86□□□□□ -1.31
NPLOC4-204ENST00000570324 ATP5G2Q06055 141 aa6.86□□□□□ -1.31
NPLOC4-204ENST00000570324 CDK10Q15131 360 aa6.86□□□□□ -1.31
NPLOC4-204ENST00000570324 PRSS8Q16651 343 aa6.86□□□□□ -1.31
NPLOC4-204ENST00000570324 OR2B11Q5JQS5 317 aa6.86□□□□□ -1.31
NPLOC4-204ENST00000570324 IDNKQ5T6J7 187 aa6.86□□□□□ -1.31
NPLOC4-204ENST00000570324 SFXN4Q6P4A7 337 aa6.86□□□□□ -1.31
NPLOC4-204ENST00000570324 HAPLN4Q86UW8 402 aa6.86□□□□□ -1.31
NPLOC4-204ENST00000570324 NR2C2APQ86WQ0 139 aa6.86□□□□□ -1.31
NPLOC4-204ENST00000570324 SBSPONQ8IVN8 264 aa6.86□□□□□ -1.31
NPLOC4-204ENST00000570324 CADM3Q8N126 398 aa6.86□□□□□ -1.31
NPLOC4-204ENST00000570324 OR9G4Q8NGQ1 327 aa6.86□□□□□ -1.31
NPLOC4-204ENST00000570324 LGALS14Q8TCE9 139 aa6.86□□□□□ -1.31
NPLOC4-204ENST00000570324 NUDCD2Q8WVJ2 157 aa6.86□□□□□ -1.31
NPLOC4-204ENST00000570324 TCTEX1D2Q8WW35 142 aa6.86□□□□□ -1.31
NPLOC4-204ENST00000570324 DDB2Q92466 427 aa6.86□□□□□ -1.31
NPLOC4-204ENST00000570324 SNAPC3Q92966 411 aa6.86□□□□□ -1.31
NPLOC4-204ENST00000570324 C5orf30Q96GV9 206 aa6.86□□□□□ -1.31
NPLOC4-204ENST00000570324 OR51E2Q9H255 320 aa6.86□□□□□ -1.31
NPLOC4-204ENST00000570324 ANXA10Q9UJ72 324 aa6.86□□□□□ -1.31
NPLOC4-204ENST00000570324 TRAV18A0A075B6X5 111 aa6.85□□□□□ -1.31
NPLOC4-204ENST00000570324 C3orf84H3BNL1 204 aa6.85□□□□□ -1.31
NPLOC4-204ENST00000570324 BOLA2-SMG1P6H3BVE0 249 aa6.85□□□□□ -1.31
NPLOC4-204ENST00000570324 AIREO43918 545 aa6.85□□□□□ -1.31
NPLOC4-204ENST00000570324 BRI3O95415 125 aa6.85□□□□□ -1.31
NPLOC4-204ENST00000570324 IGLV1-51P01701 117 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms