RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 ZNF430Q9H8G1 570 aaPredicted RBP13.1□□□□□ -0.31
MAP1LC3B-208ENST00000570189 ZNF355PQ9NSJ1 428 aa13.1□□□□□ -0.31
MAP1LC3B-208ENST00000570189 SIGLEC8Q9NYZ4 499 aa13.1□□□□□ -0.31
MAP1LC3B-208ENST00000570189 U3KQK5 164 aa13.1□□□□□ -0.31
MAP1LC3B-208ENST00000570189 TRBV9A0A0B4J1U6 114 aa13.09□□□□□ -0.31
MAP1LC3B-208ENST00000570189 MSGN1A6NI15 193 aa13.09□□□□□ -0.31
MAP1LC3B-208ENST00000570189 OR9G9P0C7N8 305 aa13.09□□□□□ -0.31
MAP1LC3B-208ENST00000570189 GP9P14770 177 aa13.09□□□□□ -0.31
MAP1LC3B-208ENST00000570189 SPNP16150 400 aa13.09□□□□□ -0.31
MAP1LC3B-208ENST00000570189 RPL30P62888 115 aaKnown RBP13.09□□□□□ -0.31
MAP1LC3B-208ENST00000570189 MXD1Q05195 221 aa13.09□□□□□ -0.31
MAP1LC3B-208ENST00000570189 NEDD8Q15843 81 aa13.09□□□□□ -0.31
MAP1LC3B-208ENST00000570189 TNXAQ16473 311 aa13.09□□□□□ -0.31
MAP1LC3B-208ENST00000570189 HOGA1Q86XE5 327 aa13.09□□□□□ -0.31
MAP1LC3B-208ENST00000570189 PUSL1Q8N0Z8 303 aaKnown RBP13.09□□□□□ -0.31
MAP1LC3B-208ENST00000570189 BEST4Q8NFU0 473 aa13.09□□□□□ -0.31
MAP1LC3B-208ENST00000570189 OR4S2Q8NH73 311 aa13.09□□□□□ -0.31
MAP1LC3B-208ENST00000570189 VSTM2AQ8TAG5 236 aa13.09□□□□□ -0.31
MAP1LC3B-208ENST00000570189 SPIN2AQ99865 258 aa13.09□□□□□ -0.31
MAP1LC3B-208ENST00000570189 SPIN2BQ9BPZ2 258 aa13.09□□□□□ -0.31
MAP1LC3B-208ENST00000570189 LOC100506127A0A0U1RQW1 187 aa13.08□□□□□ -0.32
MAP1LC3B-208ENST00000570189 FAM223BA6NKX1 122 aa13.08□□□□□ -0.32
MAP1LC3B-208ENST00000570189 FCGR3BO75015 233 aa13.08□□□□□ -0.32
MAP1LC3B-208ENST00000570189 MAS1LP35410 378 aa13.08□□□□□ -0.32
MAP1LC3B-208ENST00000570189 CBX5P45973 191 aa13.08□□□□□ -0.32
MAP1LC3B-208ENST00000570189 BRWD1-AS2P59051 145 aa13.08□□□□□ -0.32
MAP1LC3B-208ENST00000570189 KLK9Q2XQG4 91 aa13.08□□□□□ -0.32
MAP1LC3B-208ENST00000570189 FAM209BQ5JX69 171 aa13.08□□□□□ -0.32
MAP1LC3B-208ENST00000570189 IDNKQ5T6J7 187 aa13.08□□□□□ -0.32
MAP1LC3B-208ENST00000570189 FAM223AQ8IWN6 122 aa13.08□□□□□ -0.32
MAP1LC3B-208ENST00000570189 TTC9CQ8N5M4 171 aa13.08□□□□□ -0.32
MAP1LC3B-208ENST00000570189 ZBTB34Q8NCN2 500 aa13.08□□□□□ -0.32
MAP1LC3B-208ENST00000570189 PHB2Q99623 299 aa13.08□□□□□ -0.32
MAP1LC3B-208ENST00000570189 AUNIPQ9H7T9 357 aa13.08□□□□□ -0.32
MAP1LC3B-208ENST00000570189 DIABLOQ9NR28 239 aa13.08□□□□□ -0.32
MAP1LC3B-208ENST00000570189 PEF1Q9UBV8 284 aaKnown RBP13.08□□□□□ -0.32
MAP1LC3B-208ENST00000570189 KLK9Q9UKQ9 250 aa13.08□□□□□ -0.32
MAP1LC3B-208ENST00000570189 TRAV18A0A075B6X5 111 aa13.07□□□□□ -0.32
MAP1LC3B-208ENST00000570189 A8MZ25 164 aa13.07□□□□□ -0.32
MAP1LC3B-208ENST00000570189 RBFOX2O43251 390 aaKnown RBP eCLIP13.07□□□□□ -0.32
MAP1LC3B-208ENST00000570189 LY86O95711 162 aa13.07□□□□□ -0.32
MAP1LC3B-208ENST00000570189 KIR2DS2P43631 304 aa13.07□□□□□ -0.32
MAP1LC3B-208ENST00000570189 IDO2Q6ZQW0 420 aa13.07□□□□□ -0.32
MAP1LC3B-208ENST00000570189 MFSD4AQ8N468 514 aa13.07□□□□□ -0.32
MAP1LC3B-208ENST00000570189 COA4Q9NYJ1 87 aa13.07□□□□□ -0.32
MAP1LC3B-208ENST00000570189 HUWE1Q7Z6Z7 4374 aaKnown RBP13.07□□□□□ -0.32
MAP1LC3B-208ENST00000570189 XRCC3O43542 346 aa13.06□□□□□ -0.32
MAP1LC3B-208ENST00000570189 RBMXL2O75526 392 aaKnown RBP13.06□□□□□ -0.32
MAP1LC3B-208ENST00000570189 ACTL6BO94805 426 aa13.06□□□□□ -0.32
MAP1LC3B-208ENST00000570189 KBTBD11O94819 623 aa13.06□□□□□ -0.32
MAP1LC3B-208ENST00000570189 OR2A4O95047 310 aa13.06□□□□□ -0.32
MAP1LC3B-208ENST00000570189 FGF2P09038 288 aa13.06□□□□□ -0.32
MAP1LC3B-208ENST00000570189 ARPC4P59998 168 aa13.06□□□□□ -0.32
MAP1LC3B-208ENST00000570189 IL34Q6ZMJ4 242 aa13.06□□□□□ -0.32
MAP1LC3B-208ENST00000570189 SLC25A42Q86VD7 318 aa13.06□□□□□ -0.32
MAP1LC3B-208ENST00000570189 OR9G4Q8NGQ1 327 aa13.06□□□□□ -0.32
MAP1LC3B-208ENST00000570189 TMEM167AQ8TBQ9 72 aa13.06□□□□□ -0.32
MAP1LC3B-208ENST00000570189 ACOT12Q8WYK0 555 aa13.06□□□□□ -0.32
MAP1LC3B-208ENST00000570189 OR2A7Q96R45 310 aa13.06□□□□□ -0.32
MAP1LC3B-208ENST00000570189 ANAPC10Q9UM13 185 aa13.06□□□□□ -0.32
MAP1LC3B-208ENST00000570189 ZNF257Q9Y2Q1 563 aa13.06□□□□□ -0.32
MAP1LC3B-208ENST00000570189 DNAH7Q8WXX0 4024 aa13.05□□□□□ -0.32
MAP1LC3B-208ENST00000570189 TEX22C9J3V5 150 aa13.05□□□□□ -0.32
MAP1LC3B-208ENST00000570189 PPYP01298 95 aa13.05□□□□□ -0.32
MAP1LC3B-208ENST00000570189 ZNF45Q02386 682 aa13.05□□□□□ -0.32
MAP1LC3B-208ENST00000570189 GVQW1Q8N7I0 195 aa13.05□□□□□ -0.32
MAP1LC3B-208ENST00000570189 NECAP1Q8NC96 275 aa13.05□□□□□ -0.32
MAP1LC3B-208ENST00000570189 OR13F1Q8NGS4 319 aa13.05□□□□□ -0.32
MAP1LC3B-208ENST00000570189 TCTEX1D2Q8WW35 142 aa13.05□□□□□ -0.32
MAP1LC3B-208ENST00000570189 GIMAP1Q8WWP7 306 aa13.05□□□□□ -0.32
MAP1LC3B-208ENST00000570189 SNAPC3Q92966 411 aa13.05□□□□□ -0.32
MAP1LC3B-208ENST00000570189 YIPF6Q96EC8 236 aa13.05□□□□□ -0.32
MAP1LC3B-208ENST00000570189 AIFM2Q9BRQ8 373 aa13.05□□□□□ -0.32
MAP1LC3B-208ENST00000570189 DCUN1D5Q9BTE7 237 aa13.05□□□□□ -0.32
MAP1LC3B-208ENST00000570189 AKIP1Q9NQ31 210 aa13.05□□□□□ -0.32
MAP1LC3B-208ENST00000570189 A0A087WXM4 84 aa13.04□□□□□ -0.32
MAP1LC3B-208ENST00000570189 ANKRD34BA5PLL1 514 aa13.04□□□□□ -0.32
MAP1LC3B-208ENST00000570189 TRIM64CA6NLI5 447 aa13.04□□□□□ -0.32
MAP1LC3B-208ENST00000570189 NPIPB5A8MRT5 1133 aa13.04□□□□□ -0.32
MAP1LC3B-208ENST00000570189 J3QRK9 145 aa13.04□□□□□ -0.32
MAP1LC3B-208ENST00000570189 MPPED1O15442 326 aa13.04□□□□□ -0.32
MAP1LC3B-208ENST00000570189 HRASP01112 189 aa13.04□□□□□ -0.32
MAP1LC3B-208ENST00000570189 ZNF735P0CB33 412 aa13.04□□□□□ -0.32
MAP1LC3B-208ENST00000570189 FCGR2CP31995 323 aa13.04□□□□□ -0.32
MAP1LC3B-208ENST00000570189 RHOGP84095 191 aa13.04□□□□□ -0.32
MAP1LC3B-208ENST00000570189 POU2AF1Q16633 256 aa13.04□□□□□ -0.32
MAP1LC3B-208ENST00000570189 ANKRD13BQ86YJ7 626 aa13.04□□□□□ -0.32
MAP1LC3B-208ENST00000570189 OR5AP2Q8NGF4 316 aa13.04□□□□□ -0.32
MAP1LC3B-208ENST00000570189 OR4A5Q8NH83 315 aa13.04□□□□□ -0.32
MAP1LC3B-208ENST00000570189 BET1LQ9NYM9 111 aa13.04□□□□□ -0.32
MAP1LC3B-208ENST00000570189 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.03□□□□□ -0.32
MAP1LC3B-208ENST00000570189 AIREO43918 545 aa13.03□□□□□ -0.32
MAP1LC3B-208ENST00000570189 TNFAIP8O95379 198 aa13.03□□□□□ -0.32
MAP1LC3B-208ENST00000570189 TRBV12-3P01733 135 aa13.03□□□□□ -0.32
MAP1LC3B-208ENST00000570189 CRYGCP07315 174 aa13.03□□□□□ -0.32
MAP1LC3B-208ENST00000570189 FRMD6-AS1P0C7T7 363 aa13.03□□□□□ -0.32
MAP1LC3B-208ENST00000570189 MECP2P51608 486 aaKnown RBP13.03□□□□□ -0.32
MAP1LC3B-208ENST00000570189 SYNJ2BPP57105 145 aa13.03□□□□□ -0.32
MAP1LC3B-208ENST00000570189 TATDN3Q17R31 274 aa13.03□□□□□ -0.32
MAP1LC3B-208ENST00000570189 UBE2NLQ5JXB2 153 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms