RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 DUXBA0A1W2PPF3 345 aa18.72■□□□□ 0.59
RAB40C-212ENST00000569575 RRHO14718 337 aa18.72■□□□□ 0.59
RAB40C-212ENST00000569575 RAMP3O60896 148 aa18.72■□□□□ 0.59
RAB40C-212ENST00000569575 SFT2D2O95562 160 aa18.72■□□□□ 0.59
RAB40C-212ENST00000569575 DHFRP00374 187 aa18.72■□□□□ 0.59
RAB40C-212ENST00000569575 IL5P05113 134 aa18.72■□□□□ 0.59
RAB40C-212ENST00000569575 OR5AC1P0C628 307 aa18.72■□□□□ 0.59
RAB40C-212ENST00000569575 SUPT4H1P63272 117 aaKnown RBP18.72■□□□□ 0.59
RAB40C-212ENST00000569575 HNF4GQ14541 408 aa18.72■□□□□ 0.59
RAB40C-212ENST00000569575 LY6EQ16553 131 aa18.72■□□□□ 0.59
RAB40C-212ENST00000569575 RHOVQ96L33 236 aa18.72■□□□□ 0.59
RAB40C-212ENST00000569575 ESM1Q9NQ30 184 aa18.72■□□□□ 0.59
RAB40C-212ENST00000569575 NCBP2LA6PVI3 153 aaKnown RBP18.71■□□□□ 0.59
RAB40C-212ENST00000569575 GPR137BO60478 399 aa18.71■□□□□ 0.59
RAB40C-212ENST00000569575 DUS4LO95620 317 aaKnown RBP18.71■□□□□ 0.59
RAB40C-212ENST00000569575 CRYBA1P05813 215 aa18.71■□□□□ 0.59
RAB40C-212ENST00000569575 RAB25P57735 213 aa18.71■□□□□ 0.59
RAB40C-212ENST00000569575 PSG5Q15238 335 aa18.71■□□□□ 0.59
RAB40C-212ENST00000569575 C4orf46Q504U0 113 aa18.71■□□□□ 0.59
RAB40C-212ENST00000569575 LYG2Q86SG7 212 aa18.71■□□□□ 0.59
RAB40C-212ENST00000569575 FAM219AQ8IW50 185 aa18.71■□□□□ 0.59
RAB40C-212ENST00000569575 LGI3Q8N145 548 aa18.71■□□□□ 0.59
RAB40C-212ENST00000569575 FAM71E2Q8N5Q1 922 aa18.71■□□□□ 0.59
RAB40C-212ENST00000569575 LRTM2Q8N967 370 aa18.71■□□□□ 0.59
RAB40C-212ENST00000569575 RASL11BQ9BPW5 248 aa18.71■□□□□ 0.59
RAB40C-212ENST00000569575 GPN1Q9HCN4 374 aaPredicted RBP18.71■□□□□ 0.59
RAB40C-212ENST00000569575 BET1LQ9NYM9 111 aa18.71■□□□□ 0.59
RAB40C-212ENST00000569575 FLVCR2Q9UPI3 526 aa18.71■□□□□ 0.59
RAB40C-212ENST00000569575 SVEP1Q4LDE5 3571 aa18.7■□□□□ 0.58
RAB40C-212ENST00000569575 TRAV6A0A075B6T7 132 aa18.7■□□□□ 0.58
RAB40C-212ENST00000569575 A0A0B4J2A0 478 aa18.7■□□□□ 0.58
RAB40C-212ENST00000569575 C9orf170A2RU37 121 aa18.7■□□□□ 0.58
RAB40C-212ENST00000569575 INMT-MINDY4F8WBC2 141 aa18.7■□□□□ 0.58
RAB40C-212ENST00000569575 IGLV2-23P01705 113 aa18.7■□□□□ 0.58
RAB40C-212ENST00000569575 VSIG10L2P0DP72 767 aa18.7■□□□□ 0.58
RAB40C-212ENST00000569575 VAMP1P23763 118 aa18.7■□□□□ 0.58
RAB40C-212ENST00000569575 PPP1R1AQ13522 171 aa18.7■□□□□ 0.58
RAB40C-212ENST00000569575 TMEM187Q14656 261 aa18.7■□□□□ 0.58
RAB40C-212ENST00000569575 C5orf64Q2M2E5 130 aa18.7■□□□□ 0.58
RAB40C-212ENST00000569575 TRIM16LQ309B1 348 aa18.7■□□□□ 0.58
RAB40C-212ENST00000569575 OR2B11Q5JQS5 317 aa18.7■□□□□ 0.58
RAB40C-212ENST00000569575 ZNF695Q8IW36 515 aa18.7■□□□□ 0.58
RAB40C-212ENST00000569575 RBPMSQ93062 196 aaKnown RBP18.7■□□□□ 0.58
RAB40C-212ENST00000569575 CACFD1Q9UGQ2 172 aa18.7■□□□□ 0.58
RAB40C-212ENST00000569575 SHPKQ9UHJ6 478 aa18.7■□□□□ 0.58
RAB40C-212ENST00000569575 MARCH11A6NNE9 402 aa18.69■□□□□ 0.58
RAB40C-212ENST00000569575 OR2A4O95047 310 aa18.69■□□□□ 0.58
RAB40C-212ENST00000569575 HLA-AP01891 365 aaKnown RBP18.69■□□□□ 0.58
RAB40C-212ENST00000569575 DHRS2Q13268 280 aa18.69■□□□□ 0.58
RAB40C-212ENST00000569575 LIN54Q6MZP7 749 aa18.69■□□□□ 0.58
RAB40C-212ENST00000569575 C5orf56Q8N8D9 126 aa18.69■□□□□ 0.58
RAB40C-212ENST00000569575 Q8N9W7 124 aa18.69■□□□□ 0.58
RAB40C-212ENST00000569575 COQ8AQ8NI60 647 aa18.69■□□□□ 0.58
RAB40C-212ENST00000569575 R3HDM4Q96D70 268 aa18.69■□□□□ 0.58
RAB40C-212ENST00000569575 OR2A7Q96R45 310 aa18.69■□□□□ 0.58
RAB40C-212ENST00000569575 S1PR2O95136 353 aa18.68■□□□□ 0.58
RAB40C-212ENST00000569575 HLA-DRB1P01911 266 aa18.68■□□□□ 0.58
RAB40C-212ENST00000569575 CRYGBP07316 175 aa18.68■□□□□ 0.58
RAB40C-212ENST00000569575 ANXA7P20073 488 aaKnown RBP18.68■□□□□ 0.58
RAB40C-212ENST00000569575 MAS1LP35410 378 aa18.68■□□□□ 0.58
RAB40C-212ENST00000569575 F2RL1P55085 397 aa18.68■□□□□ 0.58
RAB40C-212ENST00000569575 PPP1R27Q86WC6 154 aa18.68■□□□□ 0.58
RAB40C-212ENST00000569575 TMEM219Q86XT9 240 aa18.68■□□□□ 0.58
RAB40C-212ENST00000569575 PUSL1Q8N0Z8 303 aaKnown RBP18.68■□□□□ 0.58
RAB40C-212ENST00000569575 DMBX1Q8NFW5 382 aa18.68■□□□□ 0.58
RAB40C-212ENST00000569575 LSM10Q969L4 123 aaKnown RBP18.68■□□□□ 0.58
RAB40C-212ENST00000569575 RITA1Q96K30 269 aa18.68■□□□□ 0.58
RAB40C-212ENST00000569575 PRSS22Q9GZN4 317 aa18.68■□□□□ 0.58
RAB40C-212ENST00000569575 METTL1Q9UBP6 276 aaKnown RBP18.68■□□□□ 0.58
RAB40C-212ENST00000569575 SIGLEC9Q9Y336 463 aa18.68■□□□□ 0.58
RAB40C-212ENST00000569575 SRRM4A7MD48 611 aaKnown RBP18.67■□□□□ 0.58
RAB40C-212ENST00000569575 SNRPGP15A8MWD9 76 aa18.67■□□□□ 0.58
RAB40C-212ENST00000569575 CHST1O43916 411 aa18.67■□□□□ 0.58
RAB40C-212ENST00000569575 IL6RP08887 468 aaPredicted RBP18.67■□□□□ 0.58
RAB40C-212ENST00000569575 OXA1LQ15070 435 aa18.67■□□□□ 0.58
RAB40C-212ENST00000569575 PLGLAQ15195 96 aa18.67■□□□□ 0.58
RAB40C-212ENST00000569575 SP6Q3SY56 376 aa18.67■□□□□ 0.58
RAB40C-212ENST00000569575 LURAP1LQ8IV03 231 aa18.67■□□□□ 0.58
RAB40C-212ENST00000569575 MMD2Q8IY49 270 aa18.67■□□□□ 0.58
RAB40C-212ENST00000569575 TMEM167AQ8TBQ9 72 aa18.67■□□□□ 0.58
RAB40C-212ENST00000569575 RRNAD1Q96FB5 475 aaKnown RBP18.67■□□□□ 0.58
RAB40C-212ENST00000569575 SEC22AQ96IW7 307 aa18.67■□□□□ 0.58
RAB40C-212ENST00000569575 PHB2Q99623 299 aa18.67■□□□□ 0.58
RAB40C-212ENST00000569575 ANK3Q12955 4377 aaKnown RBP18.67■□□□□ 0.58
RAB40C-212ENST00000569575 KCNAB3O43448 404 aa18.66■□□□□ 0.58
RAB40C-212ENST00000569575 SLC25A17O43808 307 aa18.66■□□□□ 0.58
RAB40C-212ENST00000569575 VDAC1P21796 283 aa18.66■□□□□ 0.58
RAB40C-212ENST00000569575 H2BFWTQ7Z2G1 175 aa18.66■□□□□ 0.58
RAB40C-212ENST00000569575 ZNF431Q8TF32 576 aaPredicted RBP18.66■□□□□ 0.58
RAB40C-212ENST00000569575 MITD1Q8WV92 249 aa18.66■□□□□ 0.58
RAB40C-212ENST00000569575 TNFRSF19Q9NS68 423 aa18.66■□□□□ 0.58
RAB40C-212ENST00000569575 FKBP11Q9NYL4 201 aa18.66■□□□□ 0.58
RAB40C-212ENST00000569575 MMP24Q9Y5R2 645 aa18.66■□□□□ 0.58
RAB40C-212ENST00000569575 FAM181BA6NEQ2 426 aa18.65■□□□□ 0.58
RAB40C-212ENST00000569575 TSPAN9O75954 239 aa18.65■□□□□ 0.58
RAB40C-212ENST00000569575 KBTBD11O94819 623 aa18.65■□□□□ 0.58
RAB40C-212ENST00000569575 KRASP01116 189 aa18.65■□□□□ 0.58
RAB40C-212ENST00000569575 SAA1P0DJI8 122 aaPredicted RBP18.65■□□□□ 0.58
RAB40C-212ENST00000569575 TMEM268Q5VZI3 342 aa18.65■□□□□ 0.58
RAB40C-212ENST00000569575 OR4A47Q6IF82 309 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms