RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 HOGA1Q86XE5 327 aa6□□□□□ -1.45
CDH3-209ENST00000569080 BEST4Q8NFU0 473 aa6□□□□□ -1.45
CDH3-209ENST00000569080 TSPAN14Q8NG11 270 aa6□□□□□ -1.45
CDH3-209ENST00000569080 OR5T1Q8NG75 326 aa6□□□□□ -1.45
CDH3-209ENST00000569080 OR13F1Q8NGS4 319 aa6□□□□□ -1.45
CDH3-209ENST00000569080 SRSF12Q8WXF0 261 aaKnown RBP6□□□□□ -1.45
CDH3-209ENST00000569080 TMEM68Q96MH6 324 aa6□□□□□ -1.45
CDH3-209ENST00000569080 GPHA2Q96T91 129 aa6□□□□□ -1.45
CDH3-209ENST00000569080 TINAGL1Q9GZM7 467 aaPredicted RBP6□□□□□ -1.45
CDH3-209ENST00000569080 RBM7Q9Y580 266 aaKnown RBP6□□□□□ -1.45
CDH3-209ENST00000569080 TRBV9A0A0B4J1U6 114 aa5.99□□□□□ -1.45
CDH3-209ENST00000569080 MSGN1A6NI15 193 aa5.99□□□□□ -1.45
CDH3-209ENST00000569080 TEX22C9J3V5 150 aa5.99□□□□□ -1.45
CDH3-209ENST00000569080 AIREO43918 545 aa5.99□□□□□ -1.45
CDH3-209ENST00000569080 SLC22A5O76082 557 aa5.99□□□□□ -1.45
CDH3-209ENST00000569080 TNFAIP8O95379 198 aa5.99□□□□□ -1.45
CDH3-209ENST00000569080 CNIH1O95406 144 aa5.99□□□□□ -1.45
CDH3-209ENST00000569080 PPYP01298 95 aa5.99□□□□□ -1.45
CDH3-209ENST00000569080 APELAP0DMC3 54 aa5.99□□□□□ -1.45
CDH3-209ENST00000569080 SPNP16150 400 aa5.99□□□□□ -1.45
CDH3-209ENST00000569080 AADACP22760 399 aa5.99□□□□□ -1.45
CDH3-209ENST00000569080 RPS19P39019 145 aaKnown RBP5.99□□□□□ -1.45
CDH3-209ENST00000569080 TNXAQ16473 311 aa5.99□□□□□ -1.45
CDH3-209ENST00000569080 TIMM50Q3ZCQ8 353 aa5.99□□□□□ -1.45
CDH3-209ENST00000569080 ZNF343Q6P1L6 599 aa5.99□□□□□ -1.45
CDH3-209ENST00000569080 IL34Q6ZMJ4 242 aa5.99□□□□□ -1.45
CDH3-209ENST00000569080 VKORC1L1Q8N0U8 176 aa5.99□□□□□ -1.45
CDH3-209ENST00000569080 PUSL1Q8N0Z8 303 aaKnown RBP5.99□□□□□ -1.45
CDH3-209ENST00000569080 OR4S2Q8NH73 311 aa5.99□□□□□ -1.45
CDH3-209ENST00000569080 HSD17B10Q99714 261 aaKnown RBP5.99□□□□□ -1.45
CDH3-209ENST00000569080 TAS2R8Q9NYW2 309 aa5.99□□□□□ -1.45
CDH3-209ENST00000569080 ADAM30Q9UKF2 790 aa5.99□□□□□ -1.45
CDH3-209ENST00000569080 A0A087WXM4 84 aa5.98□□□□□ -1.45
CDH3-209ENST00000569080 A0A0G2JLM5 398 aa5.98□□□□□ -1.45
CDH3-209ENST00000569080 CGB1A6NKQ9 187 aa5.98□□□□□ -1.45
CDH3-209ENST00000569080 E7EUB6 86 aa5.98□□□□□ -1.45
CDH3-209ENST00000569080 XRCC3O43542 346 aa5.98□□□□□ -1.45
CDH3-209ENST00000569080 SAP30O75446 220 aa5.98□□□□□ -1.45
CDH3-209ENST00000569080 KBTBD11O94819 623 aa5.98□□□□□ -1.45
CDH3-209ENST00000569080 IGLV1-51P01701 117 aa5.98□□□□□ -1.45
CDH3-209ENST00000569080 FCER2P06734 321 aa5.98□□□□□ -1.45
CDH3-209ENST00000569080 IL6RP08887 468 aaPredicted RBP5.98□□□□□ -1.45
CDH3-209ENST00000569080 OR9G9P0C7N8 305 aa5.98□□□□□ -1.45
CDH3-209ENST00000569080 SMIM18P0DKX4 95 aa5.98□□□□□ -1.45
CDH3-209ENST00000569080 CD40LGP29965 261 aa5.98□□□□□ -1.45
CDH3-209ENST00000569080 FCGR2CP31995 323 aa5.98□□□□□ -1.45
CDH3-209ENST00000569080 KLF5Q13887 457 aaPredicted RBP5.98□□□□□ -1.45
CDH3-209ENST00000569080 UBE2NLQ5JXB2 153 aa5.98□□□□□ -1.45
CDH3-209ENST00000569080 ZNF66Q6ZN08 573 aa5.98□□□□□ -1.45
CDH3-209ENST00000569080 C19orf35Q6ZS72 473 aa5.98□□□□□ -1.45
CDH3-209ENST00000569080 HAPLN4Q86UW8 402 aa5.98□□□□□ -1.45
CDH3-209ENST00000569080 MMD2Q8IY49 270 aa5.98□□□□□ -1.45
CDH3-209ENST00000569080 MFSD4AQ8N468 514 aa5.98□□□□□ -1.45
CDH3-209ENST00000569080 TMEM167AQ8TBQ9 72 aa5.98□□□□□ -1.45
CDH3-209ENST00000569080 TCTEX1D2Q8WW35 142 aa5.98□□□□□ -1.45
CDH3-209ENST00000569080 ACOT12Q8WYK0 555 aa5.98□□□□□ -1.45
CDH3-209ENST00000569080 SLC25A46Q96AG3 418 aa5.98□□□□□ -1.45
CDH3-209ENST00000569080 RANGRFQ9HD47 186 aaPredicted RBP5.98□□□□□ -1.45
CDH3-209ENST00000569080 AKIP1Q9NQ31 210 aa5.98□□□□□ -1.45
CDH3-209ENST00000569080 CCL28Q9NRJ3 127 aa5.98□□□□□ -1.45
CDH3-209ENST00000569080 COA4Q9NYJ1 87 aa5.98□□□□□ -1.45
CDH3-209ENST00000569080 MRPS7Q9Y2R9 242 aaKnown RBP5.98□□□□□ -1.45
CDH3-209ENST00000569080 PRELID3BQ9Y3B1 194 aa5.98□□□□□ -1.45
CDH3-209ENST00000569080 CSMD3Q7Z407 3707 aa5.98□□□□□ -1.45
CDH3-209ENST00000569080 C13orf42A0A1B0GVH6 325 aa5.97□□□□□ -1.45
CDH3-209ENST00000569080 ANKRD34BA5PLL1 514 aa5.97□□□□□ -1.45
CDH3-209ENST00000569080 MEIS3P1A6NDR6 274 aa5.97□□□□□ -1.45
CDH3-209ENST00000569080 BMPR1BO00238 502 aa5.97□□□□□ -1.45
CDH3-209ENST00000569080 RBFOX2O43251 390 aaKnown RBP eCLIP5.97□□□□□ -1.45
CDH3-209ENST00000569080 TNFSF12O43508 249 aa5.97□□□□□ -1.45
CDH3-209ENST00000569080 CREBL2O60519 120 aaPredicted RBP5.97□□□□□ -1.45
CDH3-209ENST00000569080 OR2A4O95047 310 aa5.97□□□□□ -1.45
CDH3-209ENST00000569080 PRH1P02810 166 aa5.97□□□□□ -1.45
CDH3-209ENST00000569080 EIF4EP06730 217 aaKnown RBP5.97□□□□□ -1.45
CDH3-209ENST00000569080 ZNF735P0CB33 412 aa5.97□□□□□ -1.45
CDH3-209ENST00000569080 GP9P14770 177 aa5.97□□□□□ -1.45
CDH3-209ENST00000569080 NAT1P18440 290 aa5.97□□□□□ -1.45
CDH3-209ENST00000569080 ZP3P21754 424 aa5.97□□□□□ -1.45
CDH3-209ENST00000569080 CBX5P45973 191 aa5.97□□□□□ -1.45
CDH3-209ENST00000569080 TAS2R20P59543 309 aa5.97□□□□□ -1.45
CDH3-209ENST00000569080 ARPC4P59998 168 aa5.97□□□□□ -1.45
CDH3-209ENST00000569080 NCS1P62166 190 aa5.97□□□□□ -1.45
CDH3-209ENST00000569080 LSM3P62310 102 aaKnown RBP5.97□□□□□ -1.45
CDH3-209ENST00000569080 RHOGP84095 191 aa5.97□□□□□ -1.45
CDH3-209ENST00000569080 POU2AF1Q16633 256 aa5.97□□□□□ -1.45
CDH3-209ENST00000569080 KLK9Q2XQG4 91 aa5.97□□□□□ -1.45
CDH3-209ENST00000569080 ZNF818PQ6ZRF7 136 aa5.97□□□□□ -1.45
CDH3-209ENST00000569080 CROCCP3Q8IVE0 287 aa5.97□□□□□ -1.45
CDH3-209ENST00000569080 TTC9CQ8N5M4 171 aa5.97□□□□□ -1.45
CDH3-209ENST00000569080 SAMD12Q8N8I0 201 aa5.97□□□□□ -1.45
CDH3-209ENST00000569080 OR5AP2Q8NGF4 316 aa5.97□□□□□ -1.45
CDH3-209ENST00000569080 OR6Q1Q8NGQ2 317 aa5.97□□□□□ -1.45
CDH3-209ENST00000569080 SECTM1Q8WVN6 248 aa5.97□□□□□ -1.45
CDH3-209ENST00000569080 USMG5Q96IX5 58 aa5.97□□□□□ -1.45
CDH3-209ENST00000569080 OR2A7Q96R45 310 aa5.97□□□□□ -1.45
CDH3-209ENST00000569080 PHB2Q99623 299 aa5.97□□□□□ -1.45
CDH3-209ENST00000569080 SPIN2AQ99865 258 aa5.97□□□□□ -1.45
CDH3-209ENST00000569080 SPIN2BQ9BPZ2 258 aa5.97□□□□□ -1.45
CDH3-209ENST00000569080 THAP7Q9BT49 309 aaPredicted RBP5.97□□□□□ -1.45
CDH3-209ENST00000569080 FUNDC2Q9BWH2 189 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms