RNA–Protein interactions for RNA: ENST00000569063.5

CLK3-225, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 833 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-225ENST00000569063 ZNF355PQ9NSJ1 428 aa15.67■□□□□ 0.1
CLK3-225ENST00000569063 MSGN1A6NI15 193 aa15.66■□□□□ 0.1
CLK3-225ENST00000569063 OVOL1O14753 267 aa15.66■□□□□ 0.1
CLK3-225ENST00000569063 CREBL2O60519 120 aaPredicted RBP15.66■□□□□ 0.1
CLK3-225ENST00000569063 IGHV3-11P01762 117 aa15.66■□□□□ 0.1
CLK3-225ENST00000569063 SAA1P0DJI8 122 aaPredicted RBP15.66■□□□□ 0.1
CLK3-225ENST00000569063 BRWD1-AS2P59051 145 aa15.66■□□□□ 0.1
CLK3-225ENST00000569063 TNXAQ16473 311 aa15.66■□□□□ 0.1
CLK3-225ENST00000569063 OR2B11Q5JQS5 317 aa15.66■□□□□ 0.1
CLK3-225ENST00000569063 ZBTB34Q8NCN2 500 aa15.66■□□□□ 0.1
CLK3-225ENST00000569063 OR4S2Q8NH73 311 aa15.66■□□□□ 0.1
CLK3-225ENST00000569063 SECTM1Q8WVN6 248 aa15.66■□□□□ 0.1
CLK3-225ENST00000569063 TCTEX1D2Q8WW35 142 aa15.66■□□□□ 0.1
CLK3-225ENST00000569063 GIMAP1Q8WWP7 306 aa15.66■□□□□ 0.1
CLK3-225ENST00000569063 ZNF430Q9H8G1 570 aaPredicted RBP15.66■□□□□ 0.1
CLK3-225ENST00000569063 CCL28Q9NRJ3 127 aa15.66■□□□□ 0.1
CLK3-225ENST00000569063 TAS2R8Q9NYW2 309 aa15.66■□□□□ 0.1
CLK3-225ENST00000569063 A0A0G2JLM5 398 aa15.65■□□□□ 0.1
CLK3-225ENST00000569063 MEIS3P1A6NDR6 274 aa15.65■□□□□ 0.1
CLK3-225ENST00000569063 FCER2P06734 321 aa15.65■□□□□ 0.1
CLK3-225ENST00000569063 SLURP1P55000 103 aa15.65■□□□□ 0.1
CLK3-225ENST00000569063 TAS2R20P59543 309 aa15.65■□□□□ 0.1
CLK3-225ENST00000569063 VBP1P61758 197 aa15.65■□□□□ 0.1
CLK3-225ENST00000569063 DCTN2Q13561 401 aaKnown RBP15.65■□□□□ 0.1
CLK3-225ENST00000569063 SRSF12Q8WXF0 261 aaKnown RBP15.65■□□□□ 0.1
CLK3-225ENST00000569063 CMTM3Q96MX0 182 aa15.65■□□□□ 0.1
CLK3-225ENST00000569063 PHB2Q99623 299 aa15.65■□□□□ 0.1
CLK3-225ENST00000569063 TINAGL1Q9GZM7 467 aaPredicted RBP15.65■□□□□ 0.1
CLK3-225ENST00000569063 IFT46Q9NQC8 304 aa15.65■□□□□ 0.1
CLK3-225ENST00000569063 ANAPC10Q9UM13 185 aa15.65■□□□□ 0.1
CLK3-225ENST00000569063 C13orf42A0A1B0GVH6 325 aa15.64■□□□□ 0.09
CLK3-225ENST00000569063 ECI1P42126 302 aa15.64■□□□□ 0.09
CLK3-225ENST00000569063 ZNF429Q86V71 674 aa15.64■□□□□ 0.09
CLK3-225ENST00000569063 MMD2Q8IY49 270 aa15.64■□□□□ 0.09
CLK3-225ENST00000569063 VSTM2AQ8TAG5 236 aa15.64■□□□□ 0.09
CLK3-225ENST00000569063 ACOT12Q8WYK0 555 aa15.64■□□□□ 0.09
CLK3-225ENST00000569063 ACTL6BO94805 426 aa15.63■□□□□ 0.09
CLK3-225ENST00000569063 SMIM18P0DKX4 95 aa15.63■□□□□ 0.09
CLK3-225ENST00000569063 NAT1P18440 290 aa15.63■□□□□ 0.09
CLK3-225ENST00000569063 KIR2DS2P43631 304 aa15.63■□□□□ 0.09
CLK3-225ENST00000569063 DHRS11Q6UWP2 260 aa15.63■□□□□ 0.09
CLK3-225ENST00000569063 ADAD2Q8NCV1 583 aaKnown RBP15.63■□□□□ 0.09
CLK3-225ENST00000569063 GPHA2Q96T91 129 aa15.63■□□□□ 0.09
CLK3-225ENST00000569063 SLC5A7Q9GZV3 580 aa15.63■□□□□ 0.09
CLK3-225ENST00000569063 OR2A4O95047 310 aa15.62■□□□□ 0.09
CLK3-225ENST00000569063 APOA1P02647 267 aa15.62■□□□□ 0.09
CLK3-225ENST00000569063 EIF4EP06730 217 aaKnown RBP15.62■□□□□ 0.09
CLK3-225ENST00000569063 OR9G9P0C7N8 305 aa15.62■□□□□ 0.09
CLK3-225ENST00000569063 APELAP0DMC3 54 aa15.62■□□□□ 0.09
CLK3-225ENST00000569063 PRSS3P35030 304 aa15.62■□□□□ 0.09
CLK3-225ENST00000569063 ACSM6Q6P461 480 aa15.62■□□□□ 0.09
CLK3-225ENST00000569063 ANKRD13BQ86YJ7 626 aa15.62■□□□□ 0.09
CLK3-225ENST00000569063 VKORC1L1Q8N0U8 176 aa15.62■□□□□ 0.09
CLK3-225ENST00000569063 PUSL1Q8N0Z8 303 aaKnown RBP15.62■□□□□ 0.09
CLK3-225ENST00000569063 USMG5Q96IX5 58 aa15.62■□□□□ 0.09
CLK3-225ENST00000569063 OR2A7Q96R45 310 aa15.62■□□□□ 0.09
CLK3-225ENST00000569063 SPIN2AQ99865 258 aa15.62■□□□□ 0.09
CLK3-225ENST00000569063 SPIN2BQ9BPZ2 258 aa15.62■□□□□ 0.09
CLK3-225ENST00000569063 RANGRFQ9HD47 186 aaPredicted RBP15.62■□□□□ 0.09
CLK3-225ENST00000569063 COA4Q9NYJ1 87 aa15.62■□□□□ 0.09
CLK3-225ENST00000569063 COMMD3Q9UBI1 195 aa15.62■□□□□ 0.09
CLK3-225ENST00000569063 TNFSF12O43508 249 aa15.61■□□□□ 0.09
CLK3-225ENST00000569063 KBTBD11O94819 623 aa15.61■□□□□ 0.09
CLK3-225ENST00000569063 HRASP01112 189 aa15.61■□□□□ 0.09
CLK3-225ENST00000569063 FXYD4P59646 89 aa15.61■□□□□ 0.09
CLK3-225ENST00000569063 DYRK1AQ13627 763 aa15.61■□□□□ 0.09
CLK3-225ENST00000569063 TMEM167AQ8TBQ9 72 aa15.61■□□□□ 0.09
CLK3-225ENST00000569063 PRR25Q96S07 402 aa15.61■□□□□ 0.09
CLK3-225ENST00000569063 B9D2Q9BPU9 175 aa15.61■□□□□ 0.09
CLK3-225ENST00000569063 EHFQ9NZC4 300 aa15.61■□□□□ 0.09
CLK3-225ENST00000569063 ZNF256Q9Y2P7 627 aaPredicted RBP15.61■□□□□ 0.09
CLK3-225ENST00000569063 LSM4Q9Y4Z0 139 aaKnown RBP15.61■□□□□ 0.09
CLK3-225ENST00000569063 SMIM31A0A1B0GVY4 71 aa15.6■□□□□ 0.09
CLK3-225ENST00000569063 MPPED1O15442 326 aa15.6■□□□□ 0.09
CLK3-225ENST00000569063 RBFOX2O43251 390 aaKnown RBP eCLIP15.6■□□□□ 0.09
CLK3-225ENST00000569063 GABARAPO95166 117 aa15.6■□□□□ 0.09
CLK3-225ENST00000569063 ZP3P21754 424 aa15.6■□□□□ 0.09
CLK3-225ENST00000569063 MAS1LP35410 378 aa15.6■□□□□ 0.09
CLK3-225ENST00000569063 RFX2P48378 723 aa15.6■□□□□ 0.09
CLK3-225ENST00000569063 RORCP51449 518 aa15.6■□□□□ 0.09
CLK3-225ENST00000569063 TAS2R46P59540 309 aa15.6■□□□□ 0.09
CLK3-225ENST00000569063 CTF1Q16619 201 aa15.6■□□□□ 0.09
CLK3-225ENST00000569063 ZNF343Q6P1L6 599 aa15.6■□□□□ 0.09
CLK3-225ENST00000569063 ZNF818PQ6ZRF7 136 aa15.6■□□□□ 0.09
CLK3-225ENST00000569063 TTC9CQ8N5M4 171 aa15.6■□□□□ 0.09
CLK3-225ENST00000569063 BORCS5Q969J3 196 aa15.6■□□□□ 0.09
CLK3-225ENST00000569063 AIFM2Q9BRQ8 373 aa15.6■□□□□ 0.09
CLK3-225ENST00000569063 SULT1C2O00338 296 aa15.59■□□□□ 0.09
CLK3-225ENST00000569063 SAP30O75446 220 aa15.59■□□□□ 0.09
CLK3-225ENST00000569063 PMP2P02689 132 aa15.59■□□□□ 0.09
CLK3-225ENST00000569063 GNRHRP30968 328 aa15.59■□□□□ 0.09
CLK3-225ENST00000569063 HERV-K104P61576 105 aa15.59■□□□□ 0.09
CLK3-225ENST00000569063 CATR1Q13166 79 aa15.59■□□□□ 0.09
CLK3-225ENST00000569063 C10orf55Q5SWW7 151 aa15.59■□□□□ 0.09
CLK3-225ENST00000569063 TMEM17Q86X19 198 aa15.59■□□□□ 0.09
CLK3-225ENST00000569063 LYSMD2Q8IV50 215 aa15.59■□□□□ 0.09
CLK3-225ENST00000569063 SPAG16Q8N0X2 631 aa15.59■□□□□ 0.09
CLK3-225ENST00000569063 GPX8Q8TED1 209 aa15.59■□□□□ 0.09
CLK3-225ENST00000569063 NAA50Q9GZZ1 169 aaKnown RBP15.59■□□□□ 0.09
CLK3-225ENST00000569063 ADAM30Q9UKF2 790 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms