RNA–Protein interactions for RNA: ENST00000567947.1

CBFB-208, Transcript of core-binding factor subunit beta, human

TSL 3

Gene CBFB, Length 610 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CBFB-208	ENST00000567947	RPS4X	P62701	263 aa	Known RBP	4.03	□□□□□ -1.76
CBFB-208	ENST00000567947	CSNK2A1	P68400	391 aa	Predicted RBP	4.03	□□□□□ -1.76
CBFB-208	ENST00000567947	QRFP	P83859	136 aa		4.03	□□□□□ -1.76
CBFB-208	ENST00000567947	PRDX1	Q06830	199 aa	Known RBP	4.03	□□□□□ -1.76
CBFB-208	ENST00000567947	HSPB3	Q12988	150 aa		4.03	□□□□□ -1.76
CBFB-208	ENST00000567947	OR1Q1	Q15612	314 aa		4.03	□□□□□ -1.76
CBFB-208	ENST00000567947	PCK2	Q16822	640 aa		4.03	□□□□□ -1.76
CBFB-208	ENST00000567947	ANKRD55	Q3KP44	614 aa		4.03	□□□□□ -1.76
CBFB-208	ENST00000567947	OR10J3	Q5JRS4	329 aa		4.03	□□□□□ -1.76
CBFB-208	ENST00000567947	FAM162B	Q5T6X4	162 aa		4.03	□□□□□ -1.76
CBFB-208	ENST00000567947	WDR25	Q64LD2	544 aa	Predicted RBP	4.03	□□□□□ -1.76
CBFB-208	ENST00000567947	OR4C11	Q6IEV9	310 aa		4.03	□□□□□ -1.76
CBFB-208	ENST00000567947	GTF2H5	Q6ZYL4	71 aa		4.03	□□□□□ -1.76
CBFB-208	ENST00000567947	TMEM144	Q7Z5S9	345 aa		4.03	□□□□□ -1.76
CBFB-208	ENST00000567947	ZNF440	Q8IYI8	595 aa		4.03	□□□□□ -1.76
CBFB-208	ENST00000567947	MUC15	Q8N387	334 aa		4.03	□□□□□ -1.76
CBFB-208	ENST00000567947	SLC22A24	Q8N4F4	322 aa		4.03	□□□□□ -1.76
CBFB-208	ENST00000567947	FAM89B	Q8N5H3	189 aa		4.03	□□□□□ -1.76
CBFB-208	ENST00000567947	STPG4	Q8N801	248 aa		4.03	□□□□□ -1.76
CBFB-208	ENST00000567947	LINC01555	Q8NAE3	123 aa		4.03	□□□□□ -1.76
CBFB-208	ENST00000567947	CHST4	Q8NCG5	386 aa		4.03	□□□□□ -1.76
CBFB-208	ENST00000567947	ADAD2	Q8NCV1	583 aa	Known RBP	4.03	□□□□□ -1.76
CBFB-208	ENST00000567947	CSNK2A3	Q8NEV1	391 aa		4.03	□□□□□ -1.76
CBFB-208	ENST00000567947	OR52E2	Q8NGJ4	325 aa		4.03	□□□□□ -1.76
CBFB-208	ENST00000567947	OR1L6	Q8NGR2	347 aa		4.03	□□□□□ -1.76
CBFB-208	ENST00000567947	OR13C9	Q8NGT0	318 aa		4.03	□□□□□ -1.76
CBFB-208	ENST00000567947	OR5H2	Q8NGV7	314 aa		4.03	□□□□□ -1.76
CBFB-208	ENST00000567947	KCNG3	Q8TAE7	436 aa		4.03	□□□□□ -1.76
CBFB-208	ENST00000567947	MARCH1	Q8TCQ1	289 aa		4.03	□□□□□ -1.76
CBFB-208	ENST00000567947	DOK4	Q8TEW6	326 aa		4.03	□□□□□ -1.76
CBFB-208	ENST00000567947	ABHD3	Q8WU67	409 aa		4.03	□□□□□ -1.76
CBFB-208	ENST00000567947	APH1A	Q96BI3	265 aa		4.03	□□□□□ -1.76
CBFB-208	ENST00000567947	TM4SF19	Q96DZ7	209 aa		4.03	□□□□□ -1.76
CBFB-208	ENST00000567947	SIGLEC12	Q96PQ1	595 aa		4.03	□□□□□ -1.76
CBFB-208	ENST00000567947	UHRF2	Q96PU4	802 aa		4.03	□□□□□ -1.76
CBFB-208	ENST00000567947	OR6C1	Q96RD1	312 aa		4.03	□□□□□ -1.76
CBFB-208	ENST00000567947	CITED2	Q99967	270 aa	Predicted RBP	4.03	□□□□□ -1.76
CBFB-208	ENST00000567947	ALG12	Q9BV10	488 aa		4.03	□□□□□ -1.76
CBFB-208	ENST00000567947	C11orf1	Q9H5F2	150 aa		4.03	□□□□□ -1.76
CBFB-208	ENST00000567947	MED20	Q9H944	212 aa		4.03	□□□□□ -1.76
CBFB-208	ENST00000567947	AK3	Q9UIJ7	227 aa		4.03	□□□□□ -1.76
CBFB-208	ENST00000567947	HSF4	Q9ULV5	492 aa		4.03	□□□□□ -1.76
CBFB-208	ENST00000567947	HHLA2	Q9UM44	414 aa		4.03	□□□□□ -1.76
CBFB-208	ENST00000567947	NPIPA1	Q9UND3	350 aa		4.03	□□□□□ -1.76
CBFB-208	ENST00000567947	WDR45	Q9Y484	360 aa		4.03	□□□□□ -1.76
CBFB-208	ENST00000567947	LIPG	Q9Y5X9	500 aa		4.03	□□□□□ -1.76
CBFB-208	ENST00000567947	HEATR5A	Q86XA9	2040 aa		4.03	□□□□□ -1.76
CBFB-208	ENST00000567947	ZGRF1	Q86YA3	2104 aa		4.03	□□□□□ -1.76
CBFB-208	ENST00000567947	DOPEY2	Q9Y3R5	2298 aa		4.02	□□□□□ -1.77
CBFB-208	ENST00000567947	RELN	P78509	3460 aa		4.02	□□□□□ -1.77
CBFB-208	ENST00000567947	SPEN	Q96T58	3664 aa	Known RBP	4.02	□□□□□ -1.77
CBFB-208	ENST00000567947	LOC101059948	A0A1B0GTJ6	334 aa		4.02	□□□□□ -1.77
CBFB-208	ENST00000567947	SERTM2	A0A1B0GWG4	89 aa		4.02	□□□□□ -1.77
CBFB-208	ENST00000567947	TMEM189	A5PLL7	270 aa		4.02	□□□□□ -1.77
CBFB-208	ENST00000567947	SERINC4	A6NH21	518 aa		4.02	□□□□□ -1.77
CBFB-208	ENST00000567947	TMEM14DP	A8MWL7	114 aa		4.02	□□□□□ -1.77
CBFB-208	ENST00000567947	OR11H12	B2RN74	326 aa		4.02	□□□□□ -1.77
CBFB-208	ENST00000567947	NPIPA7	E9PJI5	369 aa		4.02	□□□□□ -1.77
CBFB-208	ENST00000567947		J3QR89	54 aa		4.02	□□□□□ -1.77
CBFB-208	ENST00000567947	SMAD9	O15198	467 aa	Known RBP	4.02	□□□□□ -1.77
CBFB-208	ENST00000567947	CD5L	O43866	347 aa		4.02	□□□□□ -1.77
CBFB-208	ENST00000567947	OR7C2	O60412	319 aa		4.02	□□□□□ -1.77
CBFB-208	ENST00000567947	SMPD2	O60906	423 aa		4.02	□□□□□ -1.77
CBFB-208	ENST00000567947	NPIPB7	O75200	414 aa		4.02	□□□□□ -1.77
CBFB-208	ENST00000567947	ZNF253	O75346	499 aa		4.02	□□□□□ -1.77
CBFB-208	ENST00000567947	HYPM	O75409	117 aa		4.02	□□□□□ -1.77
CBFB-208	ENST00000567947	SCRG1	O75711	98 aa		4.02	□□□□□ -1.77
CBFB-208	ENST00000567947	CLDN14	O95500	239 aa		4.02	□□□□□ -1.77
CBFB-208	ENST00000567947	NUDT14	O95848	222 aa		4.02	□□□□□ -1.77
CBFB-208	ENST00000567947	NRAS	P01111	189 aa		4.02	□□□□□ -1.77
CBFB-208	ENST00000567947	KRAS	P01116	189 aa		4.02	□□□□□ -1.77
CBFB-208	ENST00000567947	NPIPA8	P0DM63	369 aa		4.02	□□□□□ -1.77
CBFB-208	ENST00000567947	SLC25A6	P12236	298 aa		4.02	□□□□□ -1.77
CBFB-208	ENST00000567947	HIST1H1C	P16403	213 aa	Known RBP	4.02	□□□□□ -1.77
CBFB-208	ENST00000567947	ZNF10	P21506	573 aa	Predicted RBP	4.02	□□□□□ -1.77
CBFB-208	ENST00000567947	AADAC	P22760	399 aa		4.02	□□□□□ -1.77
CBFB-208	ENST00000567947	ATP6V0C	P27449	155 aa		4.02	□□□□□ -1.77
CBFB-208	ENST00000567947	GDF1	P27539	372 aa		4.02	□□□□□ -1.77
CBFB-208	ENST00000567947	CD1B	P29016	333 aa		4.02	□□□□□ -1.77
CBFB-208	ENST00000567947	PEBP1	P30086	187 aa	Known RBP	4.02	□□□□□ -1.77
CBFB-208	ENST00000567947	TSPO	P30536	169 aa		4.02	□□□□□ -1.77
CBFB-208	ENST00000567947	MC5R	P33032	325 aa		4.02	□□□□□ -1.77
CBFB-208	ENST00000567947	NCBP2	P52298	156 aa	Known RBP eCLIP	4.02	□□□□□ -1.77
CBFB-208	ENST00000567947	CLDN15	P56746	228 aa		4.02	□□□□□ -1.77
CBFB-208	ENST00000567947	TBPL1	P62380	186 aa		4.02	□□□□□ -1.77
CBFB-208	ENST00000567947	RHOB	P62745	196 aa		4.02	□□□□□ -1.77
CBFB-208	ENST00000567947	EIF2B1	Q14232	305 aa	Known RBP	4.02	□□□□□ -1.77
CBFB-208	ENST00000567947	SLC9A3R2	Q15599	337 aa		4.02	□□□□□ -1.77
CBFB-208	ENST00000567947	EFNB3	Q15768	340 aa		4.02	□□□□□ -1.77
CBFB-208	ENST00000567947	MSMO1	Q15800	293 aa		4.02	□□□□□ -1.77
CBFB-208	ENST00000567947	HIST3H3	Q16695	136 aa		4.02	□□□□□ -1.77
CBFB-208	ENST00000567947	GLYATL3	Q5SZD4	288 aa		4.02	□□□□□ -1.77
CBFB-208	ENST00000567947	LDLRAD2	Q5SZI1	272 aa		4.02	□□□□□ -1.77
CBFB-208	ENST00000567947	PRAMEF20	Q5VT98	475 aa		4.02	□□□□□ -1.77
CBFB-208	ENST00000567947	SAMD13	Q5VXD3	122 aa		4.02	□□□□□ -1.77
CBFB-208	ENST00000567947	RAET1L	Q5VY80	246 aa		4.02	□□□□□ -1.77
CBFB-208	ENST00000567947	MFSD12	Q6NUT3	480 aa		4.02	□□□□□ -1.77
CBFB-208	ENST00000567947	SLC48A1	Q6P1K1	146 aa		4.02	□□□□□ -1.77
CBFB-208	ENST00000567947	CBLN3	Q6UW01	205 aa		4.02	□□□□□ -1.77
CBFB-208	ENST00000567947		Q6ZN92	141 aa		4.02	□□□□□ -1.77

Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms