RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 TMEM95Q3KNT9 176 aa9.64□□□□□ -0.87
SF3B3-208ENST00000567250 PHLDA2Q53GA4 152 aa9.64□□□□□ -0.87
SF3B3-208ENST00000567250 IDO2Q6ZQW0 420 aa9.64□□□□□ -0.87
SF3B3-208ENST00000567250 PPP1R27Q86WC6 154 aa9.64□□□□□ -0.87
SF3B3-208ENST00000567250 TEX45Q8NA69 505 aa9.64□□□□□ -0.87
SF3B3-208ENST00000567250 OR51S1Q8NGJ8 323 aa9.64□□□□□ -0.87
SF3B3-208ENST00000567250 OR13C8Q8NGS7 320 aa9.64□□□□□ -0.87
SF3B3-208ENST00000567250 RITA1Q96K30 269 aa9.64□□□□□ -0.87
SF3B3-208ENST00000567250 CCDC32Q9BV29 185 aa9.64□□□□□ -0.87
SF3B3-208ENST00000567250 AKIP1Q9NQ31 210 aa9.64□□□□□ -0.87
SF3B3-208ENST00000567250 COMMD9Q9P000 198 aa9.64□□□□□ -0.87
SF3B3-208ENST00000567250 COPZ2Q9P299 210 aa9.64□□□□□ -0.87
SF3B3-208ENST00000567250 B3GALNT1O75752 331 aa9.63□□□□□ -0.87
SF3B3-208ENST00000567250 CA2P00918 260 aa9.63□□□□□ -0.87
SF3B3-208ENST00000567250 IGLV2-23P01705 113 aa9.63□□□□□ -0.87
SF3B3-208ENST00000567250 IL7P13232 177 aa9.63□□□□□ -0.87
SF3B3-208ENST00000567250 NQO2P16083 231 aa9.63□□□□□ -0.87
SF3B3-208ENST00000567250 VDAC1P21796 283 aa9.63□□□□□ -0.87
SF3B3-208ENST00000567250 CD40LGP29965 261 aa9.63□□□□□ -0.87
SF3B3-208ENST00000567250 PIGPP57054 158 aa9.63□□□□□ -0.87
SF3B3-208ENST00000567250 TAS2R31P59538 309 aa9.63□□□□□ -0.87
SF3B3-208ENST00000567250 ERVK-16P61578 105 aa9.63□□□□□ -0.87
SF3B3-208ENST00000567250 Q6ZS46 218 aa9.63□□□□□ -0.87
SF3B3-208ENST00000567250 TBC1D26Q86UD7 250 aa9.63□□□□□ -0.87
SF3B3-208ENST00000567250 STPG2Q8N412 459 aa9.63□□□□□ -0.87
SF3B3-208ENST00000567250 OR4X2Q8NGF9 303 aa9.63□□□□□ -0.87
SF3B3-208ENST00000567250 MARCH1Q8TCQ1 289 aa9.63□□□□□ -0.87
SF3B3-208ENST00000567250 GPHA2Q96T91 129 aa9.63□□□□□ -0.87
SF3B3-208ENST00000567250 HSPB9Q9BQS6 159 aa9.63□□□□□ -0.87
SF3B3-208ENST00000567250 C7orf50Q9BRJ6 194 aaKnown RBP9.63□□□□□ -0.87
SF3B3-208ENST00000567250 WNT10AQ9GZT5 417 aa9.63□□□□□ -0.87
SF3B3-208ENST00000567250 OR51J1Q9H342 316 aa9.63□□□□□ -0.87
SF3B3-208ENST00000567250 PLEKHA2Q9HB19 425 aa9.63□□□□□ -0.87
SF3B3-208ENST00000567250 HRASLSQ9HDD0 168 aa9.63□□□□□ -0.87
SF3B3-208ENST00000567250 PARP11Q9NR21 331 aa9.63□□□□□ -0.87
SF3B3-208ENST00000567250 TET2Q6N021 2002 aaPredicted RBP9.62□□□□□ -0.87
SF3B3-208ENST00000567250 IGHV7-81A0A0B4J1V7 117 aa9.62□□□□□ -0.87
SF3B3-208ENST00000567250 PSMB11A5LHX3 300 aa9.62□□□□□ -0.87
SF3B3-208ENST00000567250 H0Y980 276 aa9.62□□□□□ -0.87
SF3B3-208ENST00000567250 RAMP3O60896 148 aa9.62□□□□□ -0.87
SF3B3-208ENST00000567250 FBXO24O75426 580 aa9.62□□□□□ -0.87
SF3B3-208ENST00000567250 ACTL6BO94805 426 aa9.62□□□□□ -0.87
SF3B3-208ENST00000567250 IGF1P05019 195 aa9.62□□□□□ -0.87
SF3B3-208ENST00000567250 SAA1P0DJI8 122 aaPredicted RBP9.62□□□□□ -0.87
SF3B3-208ENST00000567250 RPA2P15927 270 aa9.62□□□□□ -0.87
SF3B3-208ENST00000567250 BAK1Q16611 211 aa9.62□□□□□ -0.87
SF3B3-208ENST00000567250 CENPVQ7Z7K6 275 aaPredicted RBP9.62□□□□□ -0.87
SF3B3-208ENST00000567250 MMD2Q8IY49 270 aa9.62□□□□□ -0.87
SF3B3-208ENST00000567250 COMMD1Q8N668 190 aa9.62□□□□□ -0.87
SF3B3-208ENST00000567250 ABHD5Q8WTS1 349 aa9.62□□□□□ -0.87
SF3B3-208ENST00000567250 ARPC1AQ92747 370 aa9.62□□□□□ -0.87
SF3B3-208ENST00000567250 RBMXL1Q96E39 390 aaKnown RBP9.62□□□□□ -0.87
SF3B3-208ENST00000567250 RHOVQ96L33 236 aa9.62□□□□□ -0.87
SF3B3-208ENST00000567250 SLC25A21Q9BQT8 299 aaPredicted RBP9.62□□□□□ -0.87
SF3B3-208ENST00000567250 MARCH11A6NNE9 402 aa9.61□□□□□ -0.87
SF3B3-208ENST00000567250 ATP6V0E1O15342 81 aa9.61□□□□□ -0.87
SF3B3-208ENST00000567250 MPPED1O15442 326 aa9.61□□□□□ -0.87
SF3B3-208ENST00000567250 ATG12O94817 140 aa9.61□□□□□ -0.87
SF3B3-208ENST00000567250 KBTBD11O94819 623 aa9.61□□□□□ -0.87
SF3B3-208ENST00000567250 OR2A4O95047 310 aa9.61□□□□□ -0.87
SF3B3-208ENST00000567250 S1PR2O95136 353 aa9.61□□□□□ -0.87
SF3B3-208ENST00000567250 CNIH1O95406 144 aa9.61□□□□□ -0.87
SF3B3-208ENST00000567250 SERPINE2P07093 398 aa9.61□□□□□ -0.87
SF3B3-208ENST00000567250 PI3P19957 117 aa9.61□□□□□ -0.87
SF3B3-208ENST00000567250 TMEM267Q0VDI3 215 aaPredicted RBP9.61□□□□□ -0.87
SF3B3-208ENST00000567250 ZNF846Q147U1 533 aa9.61□□□□□ -0.87
SF3B3-208ENST00000567250 RBMS2Q15434 407 aaKnown RBP9.61□□□□□ -0.87
SF3B3-208ENST00000567250 ZNF562Q6V9R5 426 aa9.61□□□□□ -0.87
SF3B3-208ENST00000567250 DMBX1Q8NFW5 382 aa9.61□□□□□ -0.87
SF3B3-208ENST00000567250 OR4A5Q8NH83 315 aa9.61□□□□□ -0.87
SF3B3-208ENST00000567250 OR2A7Q96R45 310 aa9.61□□□□□ -0.87
SF3B3-208ENST00000567250 CLCC1Q96S66 551 aa9.61□□□□□ -0.87
SF3B3-208ENST00000567250 SDHCQ99643 169 aaPredicted RBP9.61□□□□□ -0.87
SF3B3-208ENST00000567250 CITED1Q99966 193 aa9.61□□□□□ -0.87
SF3B3-208ENST00000567250 TPSG1Q9NRR2 321 aa9.61□□□□□ -0.87
SF3B3-208ENST00000567250 BET1LQ9NYM9 111 aa9.61□□□□□ -0.87
SF3B3-208ENST00000567250 PIGBOS1A0A0B4J2F0 54 aa9.6□□□□□ -0.87
SF3B3-208ENST00000567250 TEX13DA0A0J9YY54 714 aaPredicted RBP9.6□□□□□ -0.87
SF3B3-208ENST00000567250 C3orf85A0A1B0GTC6 90 aa9.6□□□□□ -0.87
SF3B3-208ENST00000567250 SRRM4A7MD48 611 aaKnown RBP9.6□□□□□ -0.87
SF3B3-208ENST00000567250 CRYGBP07316 175 aa9.6□□□□□ -0.87
SF3B3-208ENST00000567250 MAS1LP35410 378 aa9.6□□□□□ -0.87
SF3B3-208ENST00000567250 CRIP2P52943 208 aaPredicted RBP9.6□□□□□ -0.87
SF3B3-208ENST00000567250 BRWD1-AS2P59051 145 aa9.6□□□□□ -0.87
SF3B3-208ENST00000567250 GNB1P62873 340 aa9.6□□□□□ -0.87
SF3B3-208ENST00000567250 CX3CL1P78423 397 aa9.6□□□□□ -0.87
SF3B3-208ENST00000567250 TNXAQ16473 311 aa9.6□□□□□ -0.87
SF3B3-208ENST00000567250 POU2AF1Q16633 256 aa9.6□□□□□ -0.87
SF3B3-208ENST00000567250 SSX9Q7RTT3 188 aa9.6□□□□□ -0.87
SF3B3-208ENST00000567250 SGPP2Q8IWX5 399 aa9.6□□□□□ -0.87
SF3B3-208ENST00000567250 OR5AU1Q8NGC0 362 aa9.6□□□□□ -0.87
SF3B3-208ENST00000567250 TMEM167AQ8TBQ9 72 aa9.6□□□□□ -0.87
SF3B3-208ENST00000567250 MRGPRFQ96AM1 343 aa9.6□□□□□ -0.87
SF3B3-208ENST00000567250 R3HDM4Q96D70 268 aa9.6□□□□□ -0.87
SF3B3-208ENST00000567250 NOL4LQ96MY1 436 aaPredicted RBP9.6□□□□□ -0.87
SF3B3-208ENST00000567250 C5orf66Q9H5L9 145 aa9.6□□□□□ -0.87
SF3B3-208ENST00000567250 GPR132Q9UNW8 380 aa9.6□□□□□ -0.87
SF3B3-208ENST00000567250 TRAV41A0A0B4J266 112 aa9.59□□□□□ -0.87
SF3B3-208ENST00000567250 OPN1MWP04001 364 aa9.59□□□□□ -0.87
SF3B3-208ENST00000567250 FGF2P09038 288 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 121.6 ms