RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 ZNF90Q03938 601 aa13.09□□□□□ -0.31
COMMD4-215ENST00000566843 WDR31Q8NA23 367 aa13.09□□□□□ -0.31
COMMD4-215ENST00000566843 SCCPDHQ8NBX0 429 aa13.09□□□□□ -0.31
COMMD4-215ENST00000566843 POLDIP2Q9Y2S7 368 aa13.09□□□□□ -0.31
COMMD4-215ENST00000566843 DOCK11Q5JSL3 2073 aa13.09□□□□□ -0.31
COMMD4-215ENST00000566843 WDR87Q6ZQQ6 2873 aa13.09□□□□□ -0.31
COMMD4-215ENST00000566843 SCO2A0A1W2PP80 73 aa13.08□□□□□ -0.32
COMMD4-215ENST00000566843 IGHEP01854 428 aa13.08□□□□□ -0.32
COMMD4-215ENST00000566843 LGALS4P56470 323 aa13.08□□□□□ -0.32
COMMD4-215ENST00000566843 ZNF718Q3SXZ3 478 aa13.08□□□□□ -0.32
COMMD4-215ENST00000566843 AARDQ4LEZ3 155 aa13.08□□□□□ -0.32
COMMD4-215ENST00000566843 ZNF808Q8N4W9 903 aaPredicted RBP13.08□□□□□ -0.32
COMMD4-215ENST00000566843 GALMQ96C23 342 aa13.08□□□□□ -0.32
COMMD4-215ENST00000566843 GP6Q9HCN6 339 aa13.08□□□□□ -0.32
COMMD4-215ENST00000566843 PAM16Q9Y3D7 125 aa13.08□□□□□ -0.32
COMMD4-215ENST00000566843 LY96Q9Y6Y9 160 aa13.08□□□□□ -0.32
COMMD4-215ENST00000566843 TMEM30CPA0ZSE6 113 aa13.08□□□□□ -0.32
COMMD4-215ENST00000566843 C12orf77C9JDV5 145 aa13.08□□□□□ -0.32
COMMD4-215ENST00000566843 CXorf1O96002 111 aa13.08□□□□□ -0.32
COMMD4-215ENST00000566843 ARL14EPLP0DKL9 152 aa13.08□□□□□ -0.32
COMMD4-215ENST00000566843 EDDM3BP56851 147 aa13.08□□□□□ -0.32
COMMD4-215ENST00000566843 Q8N976 141 aa13.08□□□□□ -0.32
COMMD4-215ENST00000566843 ZNF703Q9H7S9 590 aaPredicted RBP13.08□□□□□ -0.32
COMMD4-215ENST00000566843 R4GN57 208 aa13.08□□□□□ -0.32
COMMD4-215ENST00000566843 TRBV9A0A0B4J1U6 114 aa13.07□□□□□ -0.32
COMMD4-215ENST00000566843 PEAR1Q5VY43 1037 aaPredicted RBP13.07□□□□□ -0.32
COMMD4-215ENST00000566843 PPP1R32Q7Z5V6 425 aa13.07□□□□□ -0.32
COMMD4-215ENST00000566843 OR52L2PQ8NGH6 319 aa13.07□□□□□ -0.32
COMMD4-215ENST00000566843 VN1R17PQ8TDU5 208 aa13.07□□□□□ -0.32
COMMD4-215ENST00000566843 TMEM204Q9BSN7 226 aa13.07□□□□□ -0.32
COMMD4-215ENST00000566843 MT-CO3P00414 261 aa13.06□□□□□ -0.32
COMMD4-215ENST00000566843 CCL4P13236 92 aa13.06□□□□□ -0.32
COMMD4-215ENST00000566843 CLDN18P56856 261 aa13.06□□□□□ -0.32
COMMD4-215ENST00000566843 PSG7Q13046 419 aa13.06□□□□□ -0.32
COMMD4-215ENST00000566843 SPINK9Q5DT21 86 aa13.06□□□□□ -0.32
COMMD4-215ENST00000566843 COL5A1-AS1Q5SY13 56 aa13.06□□□□□ -0.32
COMMD4-215ENST00000566843 SPATA46Q5T0L3 261 aa13.06□□□□□ -0.32
COMMD4-215ENST00000566843 MED12LQ86YW9 2145 aa13.06□□□□□ -0.32
COMMD4-215ENST00000566843 OR4B1Q8NGF8 309 aa13.06□□□□□ -0.32
COMMD4-215ENST00000566843 OR1L6Q8NGR2 347 aa13.06□□□□□ -0.32
COMMD4-215ENST00000566843 C11orf52Q96A22 123 aa13.06□□□□□ -0.32
COMMD4-215ENST00000566843 C9JCJ5 164 aa13.06□□□□□ -0.32
COMMD4-215ENST00000566843 K7EN84 100 aa13.06□□□□□ -0.32
COMMD4-215ENST00000566843 MMP23AO75900 390 aa13.06□□□□□ -0.32
COMMD4-215ENST00000566843 NXPH2O95156 264 aa13.06□□□□□ -0.32
COMMD4-215ENST00000566843 CTRLP40313 264 aa13.06□□□□□ -0.32
COMMD4-215ENST00000566843 THBS3P49746 956 aa13.06□□□□□ -0.32
COMMD4-215ENST00000566843 HLA-DRB5Q30154 266 aa13.06□□□□□ -0.32
COMMD4-215ENST00000566843 KRTCAP3Q53RY4 240 aa13.06□□□□□ -0.32
COMMD4-215ENST00000566843 SLC35E4Q6ICL7 350 aa13.06□□□□□ -0.32
COMMD4-215ENST00000566843 FAM53AQ6NSI3 398 aaPredicted RBP13.06□□□□□ -0.32
COMMD4-215ENST00000566843 IFI44Q8TCB0 444 aa13.06□□□□□ -0.32
COMMD4-215ENST00000566843 APH1AQ96BI3 265 aa13.06□□□□□ -0.32
COMMD4-215ENST00000566843 GPR179Q6PRD1 2367 aa13.05□□□□□ -0.32
COMMD4-215ENST00000566843 OOEPA6NGQ2 149 aa13.05□□□□□ -0.32
COMMD4-215ENST00000566843 RRHO14718 337 aa13.05□□□□□ -0.32
COMMD4-215ENST00000566843 TMPRSS3P57727 454 aa13.05□□□□□ -0.32
COMMD4-215ENST00000566843 TGFBR3Q03167 851 aa13.05□□□□□ -0.32
COMMD4-215ENST00000566843 SRYQ05066 204 aa13.05□□□□□ -0.32
COMMD4-215ENST00000566843 TREML4Q6UXN2 200 aa13.05□□□□□ -0.32
COMMD4-215ENST00000566843 BAGE3Q86Y29 109 aa13.05□□□□□ -0.32
COMMD4-215ENST00000566843 BAGE2Q86Y30 109 aa13.05□□□□□ -0.32
COMMD4-215ENST00000566843 SVIPQ8NHG7 77 aa13.05□□□□□ -0.32
COMMD4-215ENST00000566843 ARRDC1-AS1Q9H2J1 176 aa13.05□□□□□ -0.32
COMMD4-215ENST00000566843 FBXL7Q9UJT9 491 aa13.05□□□□□ -0.32
COMMD4-215ENST00000566843 BOKQ9UMX3 212 aaPredicted RBP13.05□□□□□ -0.32
COMMD4-215ENST00000566843 ZFP30Q9Y2G7 519 aa13.05□□□□□ -0.32
COMMD4-215ENST00000566843 YTHDF2Q9Y5A9 579 aaKnown RBP13.05□□□□□ -0.32
COMMD4-215ENST00000566843 SAA2-SAA4A0A096LPE2 208 aa13.05□□□□□ -0.32
COMMD4-215ENST00000566843 PRSS46E5RG02 174 aa13.05□□□□□ -0.32
COMMD4-215ENST00000566843 F2Z2F3 143 aa13.05□□□□□ -0.32
COMMD4-215ENST00000566843 HAND1O96004 215 aa13.05□□□□□ -0.32
COMMD4-215ENST00000566843 HBZP02008 142 aa13.05□□□□□ -0.32
COMMD4-215ENST00000566843 CYB561P49447 251 aa13.05□□□□□ -0.32
COMMD4-215ENST00000566843 ZNF766Q5HY98 468 aa13.05□□□□□ -0.32
COMMD4-215ENST00000566843 LRP11Q86VZ4 500 aa13.05□□□□□ -0.32
COMMD4-215ENST00000566843 OR2M7Q8NG81 312 aa13.05□□□□□ -0.32
COMMD4-215ENST00000566843 MGST2Q99735 147 aa13.05□□□□□ -0.32
COMMD4-215ENST00000566843 LRFN3Q9BTN0 628 aa13.05□□□□□ -0.32
COMMD4-215ENST00000566843 GGTLC1Q9BX51 225 aa13.05□□□□□ -0.32
COMMD4-215ENST00000566843 GNB1LQ9BYB4 327 aa13.05□□□□□ -0.32
COMMD4-215ENST00000566843 DIDO1Q9BTC0 2240 aaKnown RBP13.04□□□□□ -0.32
COMMD4-215ENST00000566843 LNP1A1A4G5 178 aa13.04□□□□□ -0.32
COMMD4-215ENST00000566843 FAM90A9PA6NNJ1 464 aa13.04□□□□□ -0.32
COMMD4-215ENST00000566843 LINC00473A8K010 186 aa13.04□□□□□ -0.32
COMMD4-215ENST00000566843 CDIPTO14735 213 aa13.04□□□□□ -0.32
COMMD4-215ENST00000566843 PSPNO60542 156 aa13.04□□□□□ -0.32
COMMD4-215ENST00000566843 RBMXL2O75526 392 aaKnown RBP13.04□□□□□ -0.32
COMMD4-215ENST00000566843 GPX1P07203 203 aa13.04□□□□□ -0.32
COMMD4-215ENST00000566843 TRA2AQ13595 282 aaKnown RBP eCLIP13.04□□□□□ -0.32
COMMD4-215ENST00000566843 MCEMP1Q8IX19 187 aa13.04□□□□□ -0.32
COMMD4-215ENST00000566843 RNF2Q99496 336 aa13.04□□□□□ -0.32
COMMD4-215ENST00000566843 HSD17B10Q99714 261 aaKnown RBP13.04□□□□□ -0.32
COMMD4-215ENST00000566843 SFXN3Q9BWM7 321 aa13.04□□□□□ -0.32
COMMD4-215ENST00000566843 SAMD10Q9BYL1 202 aa13.04□□□□□ -0.32
COMMD4-215ENST00000566843 OPN3Q9H1Y3 402 aaPredicted RBP13.04□□□□□ -0.32
COMMD4-215ENST00000566843 HES4Q9HCC6 221 aa13.04□□□□□ -0.32
COMMD4-215ENST00000566843 MSL2Q9HCI7 577 aa13.04□□□□□ -0.32
COMMD4-215ENST00000566843 RNF114Q9Y508 228 aa13.04□□□□□ -0.32
COMMD4-215ENST00000566843 KMT2EQ8IZD2 1858 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms