RNA–Protein interactions for RNA: ENST00000566016.5

SHCBP1-205, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 1 (best)

Gene SHCBP1, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-205ENST00000566016 PGLYRP1O75594 196 aaPredicted RBP16.55■□□□□ 0.24
SHCBP1-205ENST00000566016 CA2P00918 260 aa16.55■□□□□ 0.24
SHCBP1-205ENST00000566016 OPN1MWP04001 364 aa16.55■□□□□ 0.24
SHCBP1-205ENST00000566016 OPN1MW2P0DN77 364 aa16.55■□□□□ 0.24
SHCBP1-205ENST00000566016 OPN1MW3P0DN78 364 aa16.55■□□□□ 0.24
SHCBP1-205ENST00000566016 PYDC2Q56P42 97 aa16.55■□□□□ 0.24
SHCBP1-205ENST00000566016 C10orf99Q6UWK7 81 aa16.55■□□□□ 0.24
SHCBP1-205ENST00000566016 ZNF329Q86UD4 541 aa16.55■□□□□ 0.24
SHCBP1-205ENST00000566016 Q8N402 240 aa16.55■□□□□ 0.24
SHCBP1-205ENST00000566016 POC5Q8NA72 575 aa16.55■□□□□ 0.24
SHCBP1-205ENST00000566016 OR51H1Q8NH63 302 aa16.55■□□□□ 0.24
SHCBP1-205ENST00000566016 TERB2Q8NHR7 220 aa16.55■□□□□ 0.24
SHCBP1-205ENST00000566016 VSTM2AQ8TAG5 236 aa16.55■□□□□ 0.24
SHCBP1-205ENST00000566016 CITED2Q99967 270 aaPredicted RBP16.55■□□□□ 0.24
SHCBP1-205ENST00000566016 AIFM2Q9BRQ8 373 aa16.55■□□□□ 0.24
SHCBP1-205ENST00000566016 THAP7Q9BT49 309 aaPredicted RBP16.55■□□□□ 0.24
SHCBP1-205ENST00000566016 PARP11Q9NR21 331 aa16.55■□□□□ 0.24
SHCBP1-205ENST00000566016 RAMP3O60896 148 aa16.54■□□□□ 0.24
SHCBP1-205ENST00000566016 HRASP01112 189 aa16.54■□□□□ 0.24
SHCBP1-205ENST00000566016 IGHG4P01861 327 aa16.54■□□□□ 0.24
SHCBP1-205ENST00000566016 RLN1P04808 185 aa16.54■□□□□ 0.24
SHCBP1-205ENST00000566016 ZNF735P0CB33 412 aa16.54■□□□□ 0.24
SHCBP1-205ENST00000566016 SAA1P0DJI8 122 aaPredicted RBP16.54■□□□□ 0.24
SHCBP1-205ENST00000566016 ECI1P42126 302 aa16.54■□□□□ 0.24
SHCBP1-205ENST00000566016 C19orf54Q5BKX5 351 aa16.54■□□□□ 0.24
SHCBP1-205ENST00000566016 TEX38Q6PEX7 206 aa16.54■□□□□ 0.24
SHCBP1-205ENST00000566016 RNF152Q8N8N0 203 aa16.54■□□□□ 0.24
SHCBP1-205ENST00000566016 OR4C16Q8NGL9 310 aa16.54■□□□□ 0.24
SHCBP1-205ENST00000566016 DEDD2Q8WXF8 326 aa16.54■□□□□ 0.24
SHCBP1-205ENST00000566016 PLEKHA2Q9HB19 425 aa16.54■□□□□ 0.24
SHCBP1-205ENST00000566016 FAM212BQ9NTI7 297 aaPredicted RBP16.54■□□□□ 0.24
SHCBP1-205ENST00000566016 SLC2A8Q9NY64 477 aa16.54■□□□□ 0.24
SHCBP1-205ENST00000566016 F2RP25116 425 aa16.54■□□□□ 0.24
SHCBP1-205ENST00000566016 PPIFP30405 207 aaKnown RBP16.54■□□□□ 0.24
SHCBP1-205ENST00000566016 FOXE3Q13461 319 aa16.54■□□□□ 0.24
SHCBP1-205ENST00000566016 ARPC1AQ92747 370 aa16.54■□□□□ 0.24
SHCBP1-205ENST00000566016 RHOVQ96L33 236 aa16.54■□□□□ 0.24
SHCBP1-205ENST00000566016 SLC2A9Q9NRM0 540 aa16.54■□□□□ 0.24
SHCBP1-205ENST00000566016 TSSC4Q9Y5U2 329 aaPredicted RBP16.54■□□□□ 0.24
SHCBP1-205ENST00000566016 TRAV41A0A0B4J266 112 aa16.53■□□□□ 0.24
SHCBP1-205ENST00000566016 ADARB2-AS1A8MUL3 147 aa16.53■□□□□ 0.24
SHCBP1-205ENST00000566016 DISC1C4P0D8 188 aa16.53■□□□□ 0.24
SHCBP1-205ENST00000566016 HPRT1P00492 218 aa16.53■□□□□ 0.24
SHCBP1-205ENST00000566016 TAS2R31P59538 309 aa16.53■□□□□ 0.24
SHCBP1-205ENST00000566016 AP3S2P59780 193 aa16.53■□□□□ 0.24
SHCBP1-205ENST00000566016 RND3P61587 244 aa16.53■□□□□ 0.24
SHCBP1-205ENST00000566016 SSBP2P81877 361 aaPredicted RBP16.53■□□□□ 0.24
SHCBP1-205ENST00000566016 POU2AF1Q16633 256 aa16.53■□□□□ 0.24
SHCBP1-205ENST00000566016 PRSS8Q16651 343 aa16.53■□□□□ 0.24
SHCBP1-205ENST00000566016 MRGPRG-AS1Q2M3A8 158 aa16.53■□□□□ 0.24
SHCBP1-205ENST00000566016 MINDY2Q8NBR6 621 aa16.53■□□□□ 0.24
SHCBP1-205ENST00000566016 CLCC1Q96S66 551 aa16.53■□□□□ 0.24
SHCBP1-205ENST00000566016 PRRT1Q99946 306 aa16.53■□□□□ 0.24
SHCBP1-205ENST00000566016 SRRQ9GZT4 340 aa16.53■□□□□ 0.24
SHCBP1-205ENST00000566016 COMMD9Q9P000 198 aa16.53■□□□□ 0.24
SHCBP1-205ENST00000566016 FBXO7Q9Y3I1 522 aa16.53■□□□□ 0.24
SHCBP1-205ENST00000566016 FBN3Q75N90 2809 aa16.52■□□□□ 0.24
SHCBP1-205ENST00000566016 ELANEP08246 267 aa16.52■□□□□ 0.23
SHCBP1-205ENST00000566016 EGR2P11161 476 aaPredicted RBP16.52■□□□□ 0.23
SHCBP1-205ENST00000566016 TMEM267Q0VDI3 215 aaPredicted RBP16.52■□□□□ 0.23
SHCBP1-205ENST00000566016 PJVKQ0ZLH3 352 aa16.52■□□□□ 0.23
SHCBP1-205ENST00000566016 SURF2Q15527 256 aaPredicted RBP16.52■□□□□ 0.23
SHCBP1-205ENST00000566016 SCGB2B2Q4G0G5 96 aa16.52■□□□□ 0.23
SHCBP1-205ENST00000566016 PHLDA2Q53GA4 152 aa16.52■□□□□ 0.23
SHCBP1-205ENST00000566016 AKIRIN2Q53H80 203 aa16.52■□□□□ 0.23
SHCBP1-205ENST00000566016 FAAP20Q6NZ36 180 aa16.52■□□□□ 0.23
SHCBP1-205ENST00000566016 IDO2Q6ZQW0 420 aa16.52■□□□□ 0.23
SHCBP1-205ENST00000566016 LINC00299Q6ZSB3 139 aa16.52■□□□□ 0.23
SHCBP1-205ENST00000566016 PUSL1Q8N0Z8 303 aaKnown RBP16.52■□□□□ 0.23
SHCBP1-205ENST00000566016 BATF3Q9NR55 127 aa16.52■□□□□ 0.23
SHCBP1-205ENST00000566016 NUBP2Q9Y5Y2 271 aa16.52■□□□□ 0.23
SHCBP1-205ENST00000566016 TCRBV4S1A1TA0A5B7 111 aa16.51■□□□□ 0.23
SHCBP1-205ENST00000566016 KBTBD11O94819 623 aa16.51■□□□□ 0.23
SHCBP1-205ENST00000566016 OR2A4O95047 310 aa16.51■□□□□ 0.23
SHCBP1-205ENST00000566016 NQO2P16083 231 aa16.51■□□□□ 0.23
SHCBP1-205ENST00000566016 PSMB8P28062 276 aa16.51■□□□□ 0.23
SHCBP1-205ENST00000566016 FAUP35544 74 aaKnown RBP16.51■□□□□ 0.23
SHCBP1-205ENST00000566016 KLF9Q13886 244 aaPredicted RBP16.51■□□□□ 0.23
SHCBP1-205ENST00000566016 FXYD3Q14802 87 aa16.51■□□□□ 0.23
SHCBP1-205ENST00000566016 MMD2Q8IY49 270 aa16.51■□□□□ 0.23
SHCBP1-205ENST00000566016 ZFAND1Q8TCF1 268 aa16.51■□□□□ 0.23
SHCBP1-205ENST00000566016 MRGPRFQ96AM1 343 aa16.51■□□□□ 0.23
SHCBP1-205ENST00000566016 OR2A7Q96R45 310 aa16.51■□□□□ 0.23
SHCBP1-205ENST00000566016 ZFP57Q9NU63 452 aa16.51■□□□□ 0.23
SHCBP1-205ENST00000566016 G3V318 75 aa16.5■□□□□ 0.23
SHCBP1-205ENST00000566016 ARPC1BO15143 372 aaKnown RBP16.5■□□□□ 0.23
SHCBP1-205ENST00000566016 FGF2P09038 288 aa16.5■□□□□ 0.23
SHCBP1-205ENST00000566016 PGAM2P15259 253 aa16.5■□□□□ 0.23
SHCBP1-205ENST00000566016 SLC6A1P30531 599 aa16.5■□□□□ 0.23
SHCBP1-205ENST00000566016 PPP5CP53041 499 aa16.5■□□□□ 0.23
SHCBP1-205ENST00000566016 TBC1D26Q86UD7 250 aa16.5■□□□□ 0.23
SHCBP1-205ENST00000566016 VKORC1L1Q8N0U8 176 aa16.5■□□□□ 0.23
SHCBP1-205ENST00000566016 CADM3Q8N126 398 aa16.5■□□□□ 0.23
SHCBP1-205ENST00000566016 GDPD1Q8N9F7 314 aa16.5■□□□□ 0.23
SHCBP1-205ENST00000566016 TMEM167AQ8TBQ9 72 aa16.5■□□□□ 0.23
SHCBP1-205ENST00000566016 ZNF430Q9H8G1 570 aaPredicted RBP16.5■□□□□ 0.23
SHCBP1-205ENST00000566016 BET1LQ9NYM9 111 aa16.5■□□□□ 0.23
SHCBP1-205ENST00000566016 WSB1Q9Y6I7 421 aa16.5■□□□□ 0.23
SHCBP1-205ENST00000566016 CNIH1O95406 144 aa16.49■□□□□ 0.23
SHCBP1-205ENST00000566016 IGLV1-40P01703 118 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms