RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 Q8N1Y9 231 aa4.91□□□□□ -1.62
TCF4-228ENST00000565393 MFSD4AQ8N468 514 aa4.91□□□□□ -1.62
TCF4-228ENST00000565393 NUDCD2Q8WVJ2 157 aa4.91□□□□□ -1.62
TCF4-228ENST00000565393 TCTEX1D2Q8WW35 142 aa4.91□□□□□ -1.62
TCF4-228ENST00000565393 SRSF12Q8WXF0 261 aaKnown RBP4.91□□□□□ -1.62
TCF4-228ENST00000565393 DDB2Q92466 427 aa4.91□□□□□ -1.62
TCF4-228ENST00000565393 FCGR1BQ92637 280 aa4.91□□□□□ -1.62
TCF4-228ENST00000565393 C5orf30Q96GV9 206 aa4.91□□□□□ -1.62
TCF4-228ENST00000565393 RCHY1Q96PM5 261 aa4.91□□□□□ -1.62
TCF4-228ENST00000565393 FYTTD1Q96QD9 318 aaKnown RBP4.91□□□□□ -1.62
TCF4-228ENST00000565393 SPIN2AQ99865 258 aa4.91□□□□□ -1.62
TCF4-228ENST00000565393 SPIN2BQ9BPZ2 258 aa4.91□□□□□ -1.62
TCF4-228ENST00000565393 OR51E2Q9H255 320 aa4.91□□□□□ -1.62
TCF4-228ENST00000565393 ZNF430Q9H8G1 570 aaPredicted RBP4.91□□□□□ -1.62
TCF4-228ENST00000565393 PALMDQ9NP74 551 aa4.91□□□□□ -1.62
TCF4-228ENST00000565393 AKIP1Q9NQ31 210 aa4.91□□□□□ -1.62
TCF4-228ENST00000565393 DIABLOQ9NR28 239 aa4.91□□□□□ -1.62
TCF4-228ENST00000565393 PEMTQ9UBM1 199 aa4.91□□□□□ -1.62
TCF4-228ENST00000565393 ANXA10Q9UJ72 324 aa4.91□□□□□ -1.62
TCF4-228ENST00000565393 MRPS7Q9Y2R9 242 aaKnown RBP4.91□□□□□ -1.62
TCF4-228ENST00000565393 RBMX2Q9Y388 322 aaKnown RBP4.91□□□□□ -1.62
TCF4-228ENST00000565393 HMX3A6NHT5 357 aa4.9□□□□□ -1.63
TCF4-228ENST00000565393 TNFSF12O43508 249 aa4.9□□□□□ -1.63
TCF4-228ENST00000565393 SSX5O60225 188 aa4.9□□□□□ -1.63
TCF4-228ENST00000565393 OR2A4O95047 310 aa4.9□□□□□ -1.63
TCF4-228ENST00000565393 BRI3O95415 125 aa4.9□□□□□ -1.63
TCF4-228ENST00000565393 TRBV12-3P01733 135 aa4.9□□□□□ -1.63
TCF4-228ENST00000565393 CSN3P07498 182 aa4.9□□□□□ -1.63
TCF4-228ENST00000565393 SAA1P0DJI8 122 aaPredicted RBP4.9□□□□□ -1.63
TCF4-228ENST00000565393 DEFA4P12838 97 aa4.9□□□□□ -1.63
TCF4-228ENST00000565393 LYL1P12980 280 aa4.9□□□□□ -1.63
TCF4-228ENST00000565393 RPL30P62888 115 aaKnown RBP4.9□□□□□ -1.63
TCF4-228ENST00000565393 SSBP2P81877 361 aaPredicted RBP4.9□□□□□ -1.63
TCF4-228ENST00000565393 DYRK1AQ13627 763 aa4.9□□□□□ -1.63
TCF4-228ENST00000565393 MRGPRG-AS1Q2M3A8 158 aa4.9□□□□□ -1.63
TCF4-228ENST00000565393 SFXN4Q6P4A7 337 aa4.9□□□□□ -1.63
TCF4-228ENST00000565393 IL34Q6ZMJ4 242 aa4.9□□□□□ -1.63
TCF4-228ENST00000565393 SSX9Q7RTT3 188 aa4.9□□□□□ -1.63
TCF4-228ENST00000565393 SLC25A42Q86VD7 318 aa4.9□□□□□ -1.63
TCF4-228ENST00000565393 MMD2Q8IY49 270 aa4.9□□□□□ -1.63
TCF4-228ENST00000565393 TTC9CQ8N5M4 171 aa4.9□□□□□ -1.63
TCF4-228ENST00000565393 NECAP1Q8NC96 275 aa4.9□□□□□ -1.63
TCF4-228ENST00000565393 ADAD2Q8NCV1 583 aaKnown RBP4.9□□□□□ -1.63
TCF4-228ENST00000565393 BEST4Q8NFU0 473 aa4.9□□□□□ -1.63
TCF4-228ENST00000565393 VSTM2AQ8TAG5 236 aa4.9□□□□□ -1.63
TCF4-228ENST00000565393 MUC7Q8TAX7 377 aa4.9□□□□□ -1.63
TCF4-228ENST00000565393 OR2A7Q96R45 310 aa4.9□□□□□ -1.63
TCF4-228ENST00000565393 HSD17B10Q99714 261 aaKnown RBP4.9□□□□□ -1.63
TCF4-228ENST00000565393 AIFM2Q9BRQ8 373 aa4.9□□□□□ -1.63
TCF4-228ENST00000565393 RNF167Q9H6Y7 350 aa4.9□□□□□ -1.63
TCF4-228ENST00000565393 CCL28Q9NRJ3 127 aa4.9□□□□□ -1.63
TCF4-228ENST00000565393 TAS2R8Q9NYW2 309 aa4.9□□□□□ -1.63
TCF4-228ENST00000565393 FBXL7Q9UJT9 491 aa4.9□□□□□ -1.63
TCF4-228ENST00000565393 ADAM30Q9UKF2 790 aa4.9□□□□□ -1.63
TCF4-228ENST00000565393 NOTCH1P46531 2555 aa4.9□□□□□ -1.63
TCF4-228ENST00000565393 IGKV1D-13A0A0B4J2D9 117 aa4.89□□□□□ -1.63
TCF4-228ENST00000565393 ZNF320A2RRD8 509 aa4.89□□□□□ -1.63
TCF4-228ENST00000565393 FAM223BA6NKX1 122 aa4.89□□□□□ -1.63
TCF4-228ENST00000565393 AIREO43918 545 aa4.89□□□□□ -1.63
TCF4-228ENST00000565393 GGCTO75223 188 aaKnown RBP4.89□□□□□ -1.63
TCF4-228ENST00000565393 RBMXL2O75526 392 aaKnown RBP4.89□□□□□ -1.63
TCF4-228ENST00000565393 OR2J3O76001 311 aa4.89□□□□□ -1.63
TCF4-228ENST00000565393 OR2C1O95371 312 aa4.89□□□□□ -1.63
TCF4-228ENST00000565393 HRASP01112 189 aa4.89□□□□□ -1.63
TCF4-228ENST00000565393 IGKV1-13P0DP09 117 aa4.89□□□□□ -1.63
TCF4-228ENST00000565393 PTHLHP12272 177 aa4.89□□□□□ -1.63
TCF4-228ENST00000565393 FCGR2CP31995 323 aa4.89□□□□□ -1.63
TCF4-228ENST00000565393 RPL27AP46776 148 aaKnown RBP4.89□□□□□ -1.63
TCF4-228ENST00000565393 ZNF45Q02386 682 aa4.89□□□□□ -1.63
TCF4-228ENST00000565393 EXOSC2Q13868 293 aaKnown RBP4.89□□□□□ -1.63
TCF4-228ENST00000565393 C10orf55Q5SWW7 151 aa4.89□□□□□ -1.63
TCF4-228ENST00000565393 LCN12Q6JVE5 192 aa4.89□□□□□ -1.63
TCF4-228ENST00000565393 ZNF66Q6ZN08 573 aa4.89□□□□□ -1.63
TCF4-228ENST00000565393 HOGA1Q86XE5 327 aa4.89□□□□□ -1.63
TCF4-228ENST00000565393 FAM223AQ8IWN6 122 aa4.89□□□□□ -1.63
TCF4-228ENST00000565393 Q8N402 240 aa4.89□□□□□ -1.63
TCF4-228ENST00000565393 GVQW1Q8N7I0 195 aa4.89□□□□□ -1.63
TCF4-228ENST00000565393 OR5H6Q8NGV6 325 aa4.89□□□□□ -1.63
TCF4-228ENST00000565393 OR4S2Q8NH73 311 aa4.89□□□□□ -1.63
TCF4-228ENST00000565393 LGALS14Q8TCE9 139 aa4.89□□□□□ -1.63
TCF4-228ENST00000565393 DYNLRB2Q8TF09 96 aa4.89□□□□□ -1.63
TCF4-228ENST00000565393 SECTM1Q8WVN6 248 aa4.89□□□□□ -1.63
TCF4-228ENST00000565393 KCTD12Q96CX2 325 aaKnown RBP4.89□□□□□ -1.63
TCF4-228ENST00000565393 S100A16Q96FQ6 103 aaKnown RBP4.89□□□□□ -1.63
TCF4-228ENST00000565393 GPHA2Q96T91 129 aa4.89□□□□□ -1.63
TCF4-228ENST00000565393 SLC5A7Q9GZV3 580 aa4.89□□□□□ -1.63
TCF4-228ENST00000565393 HRASLSQ9HDD0 168 aa4.89□□□□□ -1.63
TCF4-228ENST00000565393 C19orf73Q9NVV2 129 aa4.89□□□□□ -1.63
TCF4-228ENST00000565393 RHBDL2Q9NX52 303 aa4.89□□□□□ -1.63
TCF4-228ENST00000565393 NOTCH3Q9UM47 2321 aa4.88□□□□□ -1.63
TCF4-228ENST00000565393 TRBV9A0A0B4J1U6 114 aa4.88□□□□□ -1.63
TCF4-228ENST00000565393 IZUMO1RA6ND01 250 aa4.88□□□□□ -1.63
TCF4-228ENST00000565393 PPP5D1E7EU14 171 aa4.88□□□□□ -1.63
TCF4-228ENST00000565393 BMPR1BO00238 502 aa4.88□□□□□ -1.63
TCF4-228ENST00000565393 SULT1C2O00338 296 aa4.88□□□□□ -1.63
TCF4-228ENST00000565393 NDUFB8O95169 186 aa4.88□□□□□ -1.63
TCF4-228ENST00000565393 DHFRP00374 187 aa4.88□□□□□ -1.63
TCF4-228ENST00000565393 IGLV2-14P01704 120 aa4.88□□□□□ -1.63
TCF4-228ENST00000565393 IGHV3-23P01764 117 aa4.88□□□□□ -1.63
TCF4-228ENST00000565393 HLA-AP01891 365 aaKnown RBP4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms